EY756344
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY756344 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1) HSP 1 Score: 321.242 bits (822), Expect = 1.982e-88 Identity = 154/188 (81.91%), Postives = 162/188 (86.17%), Query Frame = 2 Query: 2 HASGSLSRDYGFDPLGLSDPEGTGGFTEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLQEVKNGRLAMLAILGYFVQGLVTGSGPYQ 565 + G L D+GFDPLGLSDPEGTGGF EPKWLAYGEVINGR+AMLGA GAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWAD YTLFVLEMALMGFAEHRRFQDWA PGSMG+QYFLG EK LGGSGDPAY KDEKSMK+ KL+E+KNGRLAMLAILGYF+Q LVTG GPYQ Sbjct: 65 YLDGRLPGDFGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQALVTGVGPYQ 252 HSP 2 Score: 26.9498 bits (58), Expect = 1.982e-88 Identity = 11/11 (100.00%), Postives = 11/11 (100.00%), Query Frame = 1 Query: 595 NNNVLTSLKFH 627 NNNVLTSLKFH Sbjct: 263 NNNVLTSLKFH 273
BLAST of EY756344 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1) HSP 1 Score: 319.701 bits (818), Expect = 5.738e-88 Identity = 153/188 (81.38%), Postives = 162/188 (86.17%), Query Frame = 2 Query: 2 HASGSLSRDYGFDPLGLSDPEGTGGFTEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLQEVKNGRLAMLAILGYFVQGLVTGSGPYQ 565 + GSL DYGFDPLGLSDPEGTGGF EP+WLAYGEVINGR+AMLGAVGAIAPE LGK GLIPQETALAWFQTGVIPPAGTYNYWAD YTLFVLEMALMGFAEHRRFQDWA PGSMG+QYFLG EK GGSG+PAY KDEKS+K+ KL+EVKNGRLAMLAILGYF+QGLVTG GPYQ Sbjct: 67 YLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGFGGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQ 254 HSP 2 Score: 26.9498 bits (58), Expect = 5.738e-88 Identity = 11/11 (100.00%), Postives = 11/11 (100.00%), Query Frame = 1 Query: 595 NNNVLTSLKFH 627 NNNVLTSLKFH Sbjct: 265 NNNVLTSLKFH 275
BLAST of EY756344 vs. ExPASy Swiss-Prot
Match: CB24_ARATH (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.263e-25 Identity = 74/189 (39.15%), Postives = 99/189 (52.38%), Query Frame = 2 Query: 2 HASGSLSRDYGFDPLGLS-DPEGTGGFTEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLQEVKNGRLAMLAILGYFVQGLVTGSGPYQ 565 + +GSL+ D GFDPLGL+ DPE KW E++NGR+AMLG G + PE+ K G+I W+ AG Y+A TLFV+E L + E RR+QD NPGS+ + F++Y G+ Y E K +E+ NGRLAMLA LG+ VQ VTG GP++ Sbjct: 66 YLTGSLAGDNGFDPLGLAEDPENL------KWFVQAELVNGRWAMLGVAGMLLPEVFTKIGII---NVPEWYD------AGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPI--FKQYSLPKGEVGYPGGIFNPLNFAPTQEA-----KEKELANGRLAMLAFLGFVVQHNVTGKGPFE 232
BLAST of EY756344 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.762e-24 Identity = 74/200 (37.00%), Postives = 100/200 (50.00%), Query Frame = 2 Query: 11 GSLSRDYGFDPLGL-SDPEGTGGFTEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLG----------------GSGDPAYXXXXXXXXXXXXKDEKSMKDFKLQEVKNGRLAMLAILGYFVQGLVTGSGP 559 GSL D+GFDPLGL SDPE KW A E+++ R+AMLGA G PE L K G++ +W+ AG Y+ D TLFV+E+ L+G+AE RR+ D PG + K G GSG PA +K+ + +E+KNGRLAMLA++G + Q + TG+GP Sbjct: 80 GSLPGDFGFDPLGLGSDPESL------KWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVL---NTPSWYT------AGEQEYFTDTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPA-----------------KIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGP 247
BLAST of EY756344 vs. ExPASy Swiss-Prot
Match: CB24_PEA (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.790e-23 Identity = 71/188 (37.77%), Postives = 96/188 (51.06%), Query Frame = 2 Query: 2 HASGSLSRDYGFDPLGLS-DPEGTGGFTEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLQEVKNGRLAMLAILGYFVQGLVTGSGPY 562 + +GSL D GFDPLGL+ DPE +W E++NGR+AMLG G + PE+ G+I W+ AG Y+A TLFV+E L + E RR+QD NPGS+ + F++Y +G+ Y E K E+ NGRLAMLA LG+ +Q VTG GP+ Sbjct: 65 YLTGSLPGDNGFDPLGLAEDPENL------RWFVQAELVNGRWAMLGVAGMLLPEVFTSIGII---NVPKWYA------AGKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPI--FKQYSLPAGEVGYPGGIFNPLNFAPTLEAKEK-----EIANGRLAMLAFLGFIIQHNVTGKGPF 230
BLAST of EY756344 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.989e-23 Identity = 71/200 (35.50%), Postives = 100/200 (50.00%), Query Frame = 2 Query: 11 GSLSRDYGFDPLGL-SDPEGTGGFTEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLG----------------GSGDPAYXXXXXXXXXXXXKDEKSMKDFKLQEVKNGRLAMLAILGYFVQGLVTGSGP 559 GSL D+GFDPLGL SDPE +W E+++ R+AMLGA G PE+L K G++ +W+ AG Y+ D TLF++E+ L+G+AE RR+ D PG + K G GSG PA +K+ + +E+KNGRLAMLA++G + Q + TG+GP Sbjct: 80 GSLPGDFGFDPLGLASDPESL------RWNQQAELVHCRWAMLGAAGIFIPELLTKIGIL---NTPSWYT------AGEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPA-----------------KIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGP 247
BLAST of EY756344 vs. ExPASy Swiss-Prot
Match: CB120_HORVU (Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.734e-18 Identity = 67/189 (35.45%), Postives = 93/189 (49.21%), Query Frame = 2 Query: 2 HASGSLSRDYGFDPLGLS-DPEGTGGFTEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLQEVKNGRLAMLAILGYFVQGLVTGSGPYQ 565 + GSL D GFDPL L+ DPE + +W +V+NGR+AMLG G + PE+L KAGL+ A W + G Y+A T + M+ + E RR+QD NPGS+ + F+ Y + Y + K +E+ NGRLAMLA LG+ VQ V G GP++ Sbjct: 45 YLDGSLEGDNGFDPLALAEDPE------DLRWFVQADVVNGRWAMLGVAGMLIPEVLTKAGLM---NAPEWLRL-----PGKETYFASSSTALRVHMS-STYVEIRRWQDIKNPGSVNQDPI--FKSYSLPPHECGYPGRVFNPLNFAPLENKE------KELANGRLAMLAFLGFLVQHNVHGKGPFE 210
BLAST of EY756344 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.046e-18 Identity = 71/202 (35.15%), Postives = 102/202 (50.50%), Query Frame = 2 Query: 2 HASGSLSRDYGFDPLGLS-DPEGTGGFTEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEK-YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLQEVKNGRLAMLAILGYFVQGLVTGSGPYQTYW 574 + +G DYG+D GLS DPE F + L EVI+ R+AMLGA+G + PEIL K G+ E WF+ G I G +Y +P ++ ++ LMGF E R G +G G +K Y GG+ DP D ++ + K++E+KNGRLAM ++ G+FVQ +VTG GP + + Sbjct: 68 YLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHCRWAMLGALGCVFPEILSKNGVTFGEAV--WFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYR----VGGGPLGE----GLDKIYPGGAFDPL----------GLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLY 243
BLAST of EY756344 vs. ExPASy Swiss-Prot
Match: CB23_ORYSJ (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.046e-18 Identity = 71/199 (35.68%), Postives = 101/199 (50.75%), Query Frame = 2 Query: 2 HASGSLSRDYGFDPLGLS-DPEGTGGFTEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEK-YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLQEVKNGRLAMLAILGYFVQGLVTGSGPYQ 565 + +G DYG+D GLS DPE F + L EVI+ R+AMLGA+G + PEIL K G+ E WF+ G I G +Y +P ++ +++ LMGF E R G +G G +K Y GG+ DP D + + K++E+KNGRLAM ++ G+FVQ +VTG GP + Sbjct: 66 YLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHSRWAMLGALGCVFPEILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYR----VGGGPLGE----GLDKVYPGGAFDPL----------GLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 238
BLAST of EY756344 vs. ExPASy Swiss-Prot
Match: CB23_ORYSI (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.046e-18 Identity = 71/199 (35.68%), Postives = 101/199 (50.75%), Query Frame = 2 Query: 2 HASGSLSRDYGFDPLGLS-DPEGTGGFTEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEK-YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLQEVKNGRLAMLAILGYFVQGLVTGSGPYQ 565 + +G DYG+D GLS DPE F + L EVI+ R+AMLGA+G + PEIL K G+ E WF+ G I G +Y +P ++ +++ LMGF E R G +G G +K Y GG+ DP D + + K++E+KNGRLAM ++ G+FVQ +VTG GP + Sbjct: 66 YLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHSRWAMLGALGCVFPEILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYR----VGGGPLGE----GLDKVYPGGAFDPL----------GLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 238 The following BLAST results are available for this feature:
BLAST of EY756344 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756344 ID=EY756344; Name=EY756344; organism=Citrus sinensis; type=EST; length=786bpback to top |