EY755698

Overview
NameEY755698
Unique NameEY755698
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length840
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2227 contig Csv1_Contig2227:98..939. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY755698 vs. ExPASy Swiss-Prot
Match: Y2446_ARATH (Uncharacterized protein At2g34460, chloroplastic OS=Arabidopsis thaliana GN=At2g34460 PE=1 SV=1)

HSP 1 Score: 311.612 bits (797), Expect = 3.485e-84
Identity = 164/247 (66.40%), Postives = 197/247 (79.76%), Query Frame = 3
Query:   15 MATPLILRNCPTLCTLNSNQPPLRTLTLTKHFSVSTTKTWSHSINSTKMGKSEITEEAEENVSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFRPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGGLRNEPPTGNIVMETE 755
            MAT L+LR+   +    S+       T  K F          S  S KM K E      EN +VK KK+FVAGATG +GKRIVEQLL++GFAVKAGVRD++KAKT+  KD+PSLQIV+ADVTEG  KL+E IGDDS+AV+CATGFRPG+D+F PWKVDNFGTVNLV+ACRK+GV +F+L+SSILVNGAAMGQILNPAY+FLN+FGLTL+AKLQAE+YI+KSGINYTI+RPGGL+N+PPTGN+VME E
Sbjct:    1 MATSLLLRHSSAVFFSQSS-----FFTKNKSF---------RSFTSIKMEKGEA-----EN-AVKTKKVFVAGATGQTGKRIVEQLLSRGFAVKAGVRDVEKAKTSF-KDDPSLQIVRADVTEGPDKLAEVIGDDSQAVICATGFRPGFDIFTPWKVDNFGTVNLVDACRKQGVEKFVLVSSILVNGAAMGQILNPAYLFLNLFGLTLVAKLQAEKYIKKSGINYTIVRPGGLKNDPPTGNVVMEPE 226          
BLAST of EY755698 vs. ExPASy Swiss-Prot
Match: YHFK_BACSU (Uncharacterized sugar epimerase yhfK OS=Bacillus subtilis GN=yhfK PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.725e-12
Identity = 55/177 (31.07%), Postives = 84/177 (47.46%), Query Frame = 3
Query:  216 KIFVAGATGSSGKRIVEQLLAK-GFAVKAGVRDLDKAKTTLSKDNPSLQIVKADVTEGSAKLSEAIGDDSEAVVCATGFRPGWDLFAPWKVDNFGTVNLVEACRKRGVNRFILISSILV-NGAAMGQILNPAYIFLNVFGLTLIAKLQAEQYIRKSGINYTIIRPGGLRNEPPTGNI 740
            K+F+ GA G  G+R+V         +++A VR   K +   S +    + V A++ EGS +   A     +A++   G            VD  G    +EA    G+ RFI++S++   N     + L P Y+          AK  A++ +  SG+ YTIIRPGGLRNEP TG +
Sbjct:    2 KVFLIGANGQIGQRLVSLFQDNPDHSIRAMVR---KEEQKASLEAAGAEAVLANL-EGSPEEIAAAAKGCDAIIFTAGSGGSTGYDKTLLVDLDGAAKAIEAAAIAGIKRFIMVSALQAHNRENWNEALKPYYV----------AKHYADKILEASGLTYTIIRPGGLRNEPGTGTV 164          
The following BLAST results are available for this feature:
BLAST of EY755698 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
Y2446_ARATH3.485e-8466.40Uncharacterized protein At2g34460, chloroplastic O... [more]
YHFK_BACSU2.725e-1231.07Uncharacterized sugar epimerase yhfK OS=Bacillus s... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-031-E08-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755698 ID=EY755698; Name=EY755698; organism=Citrus sinensis; type=EST; length=840bp
CGAGTGATTTTTCTATGGCCACTCCTCTGATTCTGAGAAATTGTCCCACT
CTCTGCACTCTCAACTCTAACCAACCCCCTCTCCGCACTCTCACATTAAC
TAAGCATTTCTCCGTTTCCACCACCAAAACCTGGTCGCATTCAATCAACT
CCACCAAGATGGGAAAAAGTGAAATAACTGAGGAAGCAGAAGAAAATGTA
AGTGTGAAGCAGAAGAAGATATTTGTGGCTGGAGCAACTGGCAGTTCCGG
GAAAAGGATTGTTGAGCAGCTTCTAGCAAAGGGTTTTGCTGTCAAGGCCG
GGGTTCGGGATTTGGACAAGGCTAAAACTACTCTTTCCAAGGACAACCCA
TCTCTTCAAATTGTGAAAGCAGATGTGACAGAGGGTTCTGCCAAACTATC
AGAAGCTATAGGCGATGATTCAGAAGCTGTGGTGTGTGCCACAGGGTTTC
GGCCTGGTTGGGATTTGTTTGCTCCTTGGAAGGTTGATAATTTTGGCACA
GTAAACCTTGTTGAAGCATGCCGGAAAAGAGGCGTTAACAGATTCATTCT
TATTAGCTCCATTTTAGTCAATGGAGCTGCAATGGGGCAAATACTAAATC
CAGCTTACATTTTTCTGAATGTGTTTGGCCTCACCTTAATAGCAAAGCTT
CAGGCAGAGCAATACATCAGGAAATCTGGTATTAACTACACGATCATAAG
GCCTGGTGGATTGAGAAATGAACCCCCCACTGGAAACATTGTCATGGAGA
CAGAGATACTCTTTATGAAGTACCATTTCCAGAGATCAGGTCGCANAAAT
TGCTGGTGAGCACTACTCCATCCCGATCATCTAACAAGTT
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