EY728892
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728892 vs. ExPASy Swiss-Prot
Match: SPD2_ARATH (Spermidine synthase 2 OS=Arabidopsis thaliana GN=SPDSYN2 PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 4.074e-17 Identity = 35/67 (52.24%), Postives = 45/67 (67.16%), Query Frame = 1 Query: 337 MAETGSAAATDFPLKRPRDDGDKEASNNNNGSVLMEMDSN----KQPDCISSVIPGWFSDISPMWPG 525 M+ T A+ TD P+KRPR EA +NNG ME ++ K+P C+SS+IPGWFS+ISPMWPG Sbjct: 1 MSSTQEASVTDLPVKRPR-----EAEEDNNGGA-METENGGGEIKEPSCMSSIIPGWFSEISPMWPG 61 HSP 2 Score: 38.891 bits (89), Expect = 4.074e-17 Identity = 21/39 (53.85%), Postives = 27/39 (69.23%), Query Frame = 2 Query: 521 PVEARSLKVEKILCQGKSDHRNVWVLHSSADEAGGIVDG 637 P EA SLKVEKIL QGKSD+++V V S+ ++DG Sbjct: 60 PGEAHSLKVEKILFQGKSDYQDVIVFQSATYGKVLVLDG 98
BLAST of EY728892 vs. ExPASy Swiss-Prot
Match: SPD1_ARATH (Spermidine synthase 1 OS=Arabidopsis thaliana GN=SPDSYN1 PE=1 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 4.823e-14 Identity = 31/59 (52.54%), Postives = 39/59 (66.10%), Query Frame = 1 Query: 358 AATDFPLKRPRDDGDKEASNNNNGSVLMEM---DSNKQPDCISSVIPGWFSDISPMWPG 525 +ATD LKRPR++ D N G+ ME D K+P C S+VIPGWFS++SPMWPG Sbjct: 7 SATD--LKRPREEDD------NGGAATMETENGDQKKEPACFSTVIPGWFSEMSPMWPG 57 HSP 2 Score: 38.5058 bits (88), Expect = 4.823e-14 Identity = 20/39 (51.28%), Postives = 27/39 (69.23%), Query Frame = 2 Query: 521 PVEARSLKVEKILCQGKSDHRNVWVLHSSADEAGGIVDG 637 P EA SLKVEK+L QGKSD+++V V S+ ++DG Sbjct: 56 PGEAHSLKVEKVLFQGKSDYQDVIVFQSATYGKVLVLDG 94
BLAST of EY728892 vs. ExPASy Swiss-Prot
Match: SPDE_SOLLC (Spermidine synthase OS=Solanum lycopersicum GN=SPDSYN PE=2 SV=1) HSP 1 Score: 56.225 bits (134), Expect = 6.261e-14 Identity = 28/57 (49.12%), Postives = 38/57 (66.67%), Query Frame = 1 Query: 364 TDFPLKRPRDDG---DKEASNNNNGSVLMEMDSNKQPDCISSVIPGWFSDISPMWPG 525 T+ P+KRPR++ + EA+NN+N E S ISSV+PGWFS+ISP+WPG Sbjct: 12 TELPVKRPREEEAETEMEAANNSNNGCEKEESS----PYISSVLPGWFSEISPLWPG 64 HSP 2 Score: 42.3578 bits (98), Expect = 6.261e-14 Identity = 23/39 (58.97%), Postives = 27/39 (69.23%), Query Frame = 2 Query: 521 PVEARSLKVEKILCQGKSDHRNVWVLHSSADEAGGIVDG 637 P EA SLKVEKIL QGKSD++NV V SS ++DG Sbjct: 63 PGEAHSLKVEKILFQGKSDYQNVLVFQSSTYGKVLVLDG 101
BLAST of EY728892 vs. ExPASy Swiss-Prot
Match: SPD1_PEA (Spermidine synthase 1 OS=Pisum sativum GN=SPDSYN1 PE=2 SV=1) HSP 1 Score: 55.0694 bits (131), Expect = 6.597e-13 Identity = 27/55 (49.09%), Postives = 34/55 (61.82%), Query Frame = 1 Query: 361 ATDFPLKRPRDDGDKEASNNNNGSVLMEMDSNKQPDCISSVIPGWFSDISPMWPG 525 +TD PLKR R+D S+ + QP+ +SSVIPGWFS+ISPMWPG Sbjct: 10 STDSPLKRQREDEVNGVSDT--------LSKEPQPNGLSSVIPGWFSEISPMWPG 56 HSP 2 Score: 40.0466 bits (92), Expect = 6.597e-13 Identity = 22/39 (56.41%), Postives = 27/39 (69.23%), Query Frame = 2 Query: 521 PVEARSLKVEKILCQGKSDHRNVWVLHSSADEAGGIVDG 637 P EA SLKVEKIL QGKSD+++V V S+ I+DG Sbjct: 55 PGEAHSLKVEKILFQGKSDYQDVMVFQSATYGKVLILDG 93
BLAST of EY728892 vs. ExPASy Swiss-Prot
Match: SPD2_DATST (Spermidine synthase 2 OS=Datura stramonium PE=2 SV=1) HSP 1 Score: 52.7582 bits (125), Expect = 4.116e-12 Identity = 22/38 (57.89%), Postives = 29/38 (76.32%), Query Frame = 1 Query: 412 SNNNNGSVLMEMDSNKQPDCISSVIPGWFSDISPMWPG 525 +NNNNG ++K+ CISSV+PGWFS+ISP+WPG Sbjct: 7 NNNNNGCT-----NDKESPCISSVLPGWFSEISPLWPG 39 HSP 2 Score: 39.6614 bits (91), Expect = 4.116e-12 Identity = 21/39 (53.85%), Postives = 27/39 (69.23%), Query Frame = 2 Query: 521 PVEARSLKVEKILCQGKSDHRNVWVLHSSADEAGGIVDG 637 P EA SLKVEKIL QGKSD+++V V S+ ++DG Sbjct: 38 PGEAHSLKVEKILFQGKSDYQDVMVFQSTTYGKVLVLDG 76
BLAST of EY728892 vs. ExPASy Swiss-Prot
Match: SPD1_DATST (Spermidine synthase 1 OS=Datura stramonium PE=2 SV=1) HSP 1 Score: 46.9802 bits (110), Expect = 1.974e-11 Identity = 18/29 (62.07%), Postives = 24/29 (82.76%), Query Frame = 1 Query: 439 MEMDSNKQPDCISSVIPGWFSDISPMWPG 525 ME +NK+ ISS++PGWFS+ISP+WPG Sbjct: 1 MEEANNKESPYISSILPGWFSEISPLWPG 29 HSP 2 Score: 43.1282 bits (100), Expect = 1.974e-11 Identity = 24/39 (61.54%), Postives = 27/39 (69.23%), Query Frame = 2 Query: 521 PVEARSLKVEKILCQGKSDHRNVWVLHSSADEAGGIVDG 637 P EA SLKVEKIL QGKSD++NV V SS I+DG Sbjct: 28 PGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDG 66
BLAST of EY728892 vs. ExPASy Swiss-Prot
Match: SPDE_COFAR (Spermidine synthase OS=Coffea arabica PE=2 SV=1) HSP 1 Score: 46.9802 bits (110), Expect = 2.561e-11 Identity = 21/40 (52.50%), Postives = 30/40 (75.00%), Query Frame = 1 Query: 406 EASNNNNGSVLMEMDSNKQPDCISSVIPGWFSDISPMWPG 525 +A N+N+ + ++ + PD +SSVIPGWFS+ISPMWPG Sbjct: 3 DAVNSNS-----KEEAAQLPDGVSSVIPGWFSEISPMWPG 37 HSP 2 Score: 42.743 bits (99), Expect = 2.561e-11 Identity = 23/39 (58.97%), Postives = 27/39 (69.23%), Query Frame = 2 Query: 521 PVEARSLKVEKILCQGKSDHRNVWVLHSSADEAGGIVDG 637 P EA SLKVEKIL QGKSD++NV V SS ++DG Sbjct: 36 PGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLVLDG 74
BLAST of EY728892 vs. ExPASy Swiss-Prot
Match: SPDE_NICSY (Spermidine synthase OS=Nicotiana sylvestris PE=2 SV=1) HSP 1 Score: 46.2098 bits (108), Expect = 4.315e-11 Identity = 22/39 (56.41%), Postives = 29/39 (74.36%), Query Frame = 1 Query: 409 ASNNNNGSVLMEMDSNKQPDCISSVIPGWFSDISPMWPG 525 A++NNNG +N+ P ISSV+PGWFS+ISP+WPG Sbjct: 4 ANHNNNGC------TNESP-YISSVLPGWFSEISPLWPG 35 HSP 2 Score: 42.743 bits (99), Expect = 4.315e-11 Identity = 23/39 (58.97%), Postives = 27/39 (69.23%), Query Frame = 2 Query: 521 PVEARSLKVEKILCQGKSDHRNVWVLHSSADEAGGIVDG 637 P EA SLKVEKIL QGKSD++NV V SS ++DG Sbjct: 34 PGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLVLDG 72
BLAST of EY728892 vs. ExPASy Swiss-Prot
Match: SPD1_HYONI (Spermidine synthase 1 OS=Hyoscyamus niger PE=2 SV=1) HSP 1 Score: 46.2098 bits (108), Expect = 4.315e-11 Identity = 20/40 (50.00%), Postives = 28/40 (70.00%), Query Frame = 1 Query: 406 EASNNNNGSVLMEMDSNKQPDCISSVIPGWFSDISPMWPG 525 E +N +NG ++ K+ ISSV+PGWFS+ISP+WPG Sbjct: 2 EVTNQSNGC----SNNEKESPYISSVLPGWFSEISPLWPG 37 HSP 2 Score: 42.743 bits (99), Expect = 4.315e-11 Identity = 23/39 (58.97%), Postives = 27/39 (69.23%), Query Frame = 2 Query: 521 PVEARSLKVEKILCQGKSDHRNVWVLHSSADEAGGIVDG 637 P EA SLKVEKIL QGKSD++NV V SS ++DG Sbjct: 36 PGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLVLDG 74 The following BLAST results are available for this feature:
BLAST of EY728892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY728892 ID=EY728892; Name=EY728892; organism=Citrus sinensis; type=EST; length=831bpback to top |