EY728581

Overview
NameEY728581
Unique NameEY728581
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length403
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11600 contig Csv1_Contig11600:39..441. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_PSEPF (Imidazole glycerol phosphate synthase subunit hisF OS=Pseudomonas fluorescens (strain Pf0-1) GN=hisF PE=3 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 7.708e-72
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 1 
Query:    1 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT
Sbjct:   15 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 148
[Close]
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_PSEFS (Imidazole glycerol phosphate synthase subunit hisF OS=Pseudomonas fluorescens (strain SBW25) GN=hisF PE=3 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 7.708e-72
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 1 
Query:    1 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT
Sbjct:   15 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 148
[Close]
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_PSEF5 (Imidazole glycerol phosphate synthase subunit hisF OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=hisF PE=3 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 2.929e-71
Identity = 133/134 (99.25%), Postives = 133/134 (99.25%), Query Frame = 1 
Query:    1 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGE PRWEIFT
Sbjct:   15 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGEAPRWEIFT 148
[Close]
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_PSEU2 (Imidazole glycerol phosphate synthase subunit hisF OS=Pseudomonas syringae pv. syringae (strain B728a) GN=hisF PE=3 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 3.238e-70
Identity = 132/134 (98.51%), Postives = 132/134 (98.51%), Query Frame = 1 
Query:    1 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAA  FGSQCIVVAIDAKKVSGPGETPRWEIFT
Sbjct:   15 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAARFGSQCIVVAIDAKKVSGPGETPRWEIFT 148
[Close]
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_PSE14 (Imidazole glycerol phosphate synthase subunit hisF OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=hisF PE=3 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 3.238e-70
Identity = 132/134 (98.51%), Postives = 132/134 (98.51%), Query Frame = 1 
Query:    1 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAA  FGSQCIVVAIDAKKVSGPGETPRWEIFT
Sbjct:   15 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAARFGSQCIVVAIDAKKVSGPGETPRWEIFT 148
[Close]
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_PSEPK (Imidazole glycerol phosphate synthase subunit hisF OS=Pseudomonas putida (strain KT2440) GN=hisF PE=3 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 9.422e-70
Identity = 131/134 (97.76%), Postives = 131/134 (97.76%), Query Frame = 1 
Query:    1 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAA  FGSQCIVVAIDAKKVSGPGE PRWEIFT
Sbjct:   15 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAADRFGSQCIVVAIDAKKVSGPGEAPRWEIFT 148
[Close]
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_PSEPG (Imidazole glycerol phosphate synthase subunit hisF OS=Pseudomonas putida (strain GB-1) GN=hisF PE=3 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 9.422e-70
Identity = 131/134 (97.76%), Postives = 132/134 (98.51%), Query Frame = 1 
Query:    1 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            NGRVVKGVKFENIRDAGDPVEIARRY+EQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAA  FGSQCIVVAIDAKKVSGPGETPRWEIFT
Sbjct:   15 NGRVVKGVKFENIRDAGDPVEIARRYNEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAADRFGSQCIVVAIDAKKVSGPGETPRWEIFT 148
[Close]
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_PSEP1 (Imidazole glycerol phosphate synthase subunit hisF OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=hisF PE=3 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 9.422e-70
Identity = 131/134 (97.76%), Postives = 131/134 (97.76%), Query Frame = 1 
Query:    1 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAA  FGSQCIVVAIDAKKVSGPGE PRWEIFT
Sbjct:   15 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAADRFGSQCIVVAIDAKKVSGPGEAPRWEIFT 148
[Close]
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_PSESM (Imidazole glycerol phosphate synthase subunit hisF OS=Pseudomonas syringae pv. tomato GN=hisF PE=3 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 2.741e-69
Identity = 130/134 (97.01%), Postives = 131/134 (97.76%), Query Frame = 1 
Query:    1 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAA  FGSQCIVVAIDAK+VSGPGE PRWEIFT
Sbjct:   15 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAARFGSQCIVVAIDAKRVSGPGEAPRWEIFT 148
[Close]
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_PSEE4 (Imidazole glycerol phosphate synthase subunit hisF OS=Pseudomonas entomophila (strain L48) GN=hisF PE=3 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 3.580e-69
Identity = 130/134 (97.01%), Postives = 131/134 (97.76%), Query Frame = 1 
Query:    1 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            NGRVVKGVKFENIRDAGDPVEIARRY+EQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAA  FGSQCIVVAIDAKKVSGPGE PRWEIFT
Sbjct:   15 NGRVVKGVKFENIRDAGDPVEIARRYNEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAADRFGSQCIVVAIDAKKVSGPGEAPRWEIFT 148
The following BLAST results are available for this feature:
BLAST of EY728581 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HIS6_PSEPF7.708e-72100.00Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_PSEFS7.708e-72100.00Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_PSEF52.929e-7199.25Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_PSEU23.238e-7098.51Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_PSE143.238e-7098.51Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_PSEPK9.422e-7097.76Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_PSEPG9.422e-7097.76Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_PSEP19.422e-7097.76Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_PSESM2.741e-6997.01Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_PSEE43.580e-6997.01Imidazole glycerol phosphate synthase subunit hisF... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-005-G08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728581 ID=EY728581; Name=EY728581; organism=Citrus sinensis; type=EST; length=403bp
AACGGTCGCGTGGTCAAGGGCGTCAAGTTCGAGAACATCCGTGACGCGGG
CGACCCGGTGGAAATCGCCCGTCGCTACGACGAACAGGGCGCTGACGAGA
TTACCTTTCTCGACATCACCGCCAGTGTCGATGGTCGCGACACCACGCTG
CATACCGTCGAGCGCATGGCCAGCCAGGTGTTTATCCCGCTGACCGTGGG
CGGTGGCGTGCGCACCGTGCAGGACATTCGCAACCTGCTGAATGCCGGCG
CGGACAAGGTATCGATCAACACTGCCGCCGTGTTCAACCCGGAGTTTGTC
GGCGAAGCCGCACAGCACTTCGGTTCGCAATGCATCGTCGTCGCCATCGA
CGCCAAGAAAGTCTCCGGTCCGGGCGAAACCCCGCGCTGGGAGATCTTCA
CCC
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