EY728417
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY728417 vs. ExPASy Swiss-Prot
Match: DNLI4_ARATH (DNA ligase 4 OS=Arabidopsis thaliana GN=LIG4 PE=1 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 2.995e-49 Identity = 90/181 (49.72%), Postives = 128/181 (70.72%), Query Frame = 2 Query: 29 RYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYKKKYCPQDKWSCFHGCCIYFYHSTEPLSPDWEVXXXXXXXXXXXEISFHGGKVCNNLANATHVVVLSVLGYDVNFNSLTESFTAREKHLLWNKKLHVVRSHWLEDCLAKEQKSEEYAYSLKPTGMQES 571 +Y+LHL+D+S+ KLQ+++DEFSD Y+WDLDL +KQ+LSN +SED K+IDYYKKK CP+ +WSC CC+YFY ++ LS + E E+ GGKV NNLA+A+H+VVL++ ++F +++SF+ EK LL K+LHVV SHWLE+ L +E+K E Y+L+P M+ES Sbjct: 737 KYFLHLTDASRTKLQDDIDEFSDSYYWDLDLEGLKQVLSNAKQSEDSKSIDYYKKKLCPEKRWSCLLSCCVYFYPYSQTLSTEEEALLGIMAKRLMLEVLMAGGKVSNNLAHASHLVVLAMAEEPLDFTLVSKSFSEMEKRLLLKKRLHVVSSHWLEESLQREEKLCEDVYTLRPKYMEES 917
BLAST of EY728417 vs. ExPASy Swiss-Prot
Match: DNLI4_ORYSJ (Putative DNA ligase 4 OS=Oryza sativa subsp. japonica GN=LIG4 PE=2 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 6.063e-34 Identity = 69/170 (40.59%), Postives = 110/170 (64.71%), Query Frame = 2 Query: 65 KLQEEVDEFSDLYFWDLDLADIKQLLSNVDRS-EDPKTIDYYKKKYCPQDKWSCFHGCCIYFYHSTEPL-SPDWEVXXXXXXXXXXXEISFHGGKVCNNLANATHVVVLSVLGYDVNFNSLTESFTAREKHLLWNKKLHVVRSHWLEDCLAKEQKSEEYAYSLKPTGMQE 568 K EE+D ++D ++WD+D++D+KQ+ SN+DR+ D + +YKKKYC +++ F GCC+YFYH+ PL + D+ V +++ HGG+VC+ LA ATH++++SVL NF+ L +S E+ L +K+L VV + WLED + K+ + E YSLKP ++E Sbjct: 776 KFPEEIDSYADYFYWDIDISDLKQIFSNMDRAVVDSNMVHHYKKKYCADERFCFFQGCCVYFYHA--PLVNADYNVISDLALKRVKQDLTMHGGQVCSILAPATHLIIVSVL-QAYNFDMLYKSLPPAERRYLHDKRLQVVSNKWLEDSVEKQTRLPETTYSLKPDTLEE 942 The following BLAST results are available for this feature:
BLAST of EY728417 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY728417 ID=EY728417; Name=EY728417; organism=Citrus sinensis; type=EST; length=881bpback to top |