EY753755
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY753755 vs. ExPASy Swiss-Prot
Match: PRP16_HUMAN (Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Homo sapiens GN=DHX38 PE=1 SV=2) HSP 1 Score: 154.451 bits (389), Expect = 8.351e-37 Identity = 86/186 (46.24%), Postives = 111/186 (59.68%), Query Frame = 2 Query: 95 LPILHSEEKIVETAEQNPVAVVIGETGSGKISLFSQILHRRGVTRSGSIGXXXXXXXXXXXXXXXXXXELGVRLGEEVGYAIRFEDRTSERTLIKHLTDGALLREILSNPELSPCSVLISDEAHERSLNTDILLGLVKRSANLRASNSKSLTTSATLDGEKASKLLFHRPTLNAPGKLDPVEILHS 652 LPI +++++ N + +V+GETGSGK + +Q LH G T G IG E+G LGEEVGYAIRFED TSE TLIK++TDG LLRE L +L S +I DEAHERSLNTD+L GL+ R R S+ K + TSAT+D EK + + P + PG+ PV+IL S Sbjct: 532 LPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLL-REVVARRSDLKLIVTSATMDAEKFAAFFGNVPIFHIPGRTFPVDILFS 716
BLAST of EY753755 vs. ExPASy Swiss-Prot
Match: PRP16_BOVIN (Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Bos taurus GN=DHX38 PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 8.351e-37 Identity = 86/186 (46.24%), Postives = 111/186 (59.68%), Query Frame = 2 Query: 95 LPILHSEEKIVETAEQNPVAVVIGETGSGKISLFSQILHRRGVTRSGSIGXXXXXXXXXXXXXXXXXXELGVRLGEEVGYAIRFEDRTSERTLIKHLTDGALLREILSNPELSPCSVLISDEAHERSLNTDILLGLVKRSANLRASNSKSLTTSATLDGEKASKLLFHRPTLNAPGKLDPVEILHS 652 LPI +++++ N + +V+GETGSGK + +Q LH G T G IG E+G LGEEVGYAIRFED TSE TLIK++TDG LLRE L +L S +I DEAHERSLNTD+L GL+ R R S+ K + TSAT+D EK + + P + PG+ PV+IL S Sbjct: 532 LPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLL-REVVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFPVDILFS 716
BLAST of EY753755 vs. ExPASy Swiss-Prot
Match: DHX8_MOUSE (ATP-dependent RNA helicase DHX8 OS=Mus musculus GN=Dhx8 PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 4.145e-36 Identity = 80/187 (42.78%), Postives = 114/187 (60.96%), Query Frame = 2 Query: 92 NLPILHSEEKIVETAEQNPVAVVIGETGSGKISLFSQILHRRGVTRSGSIGXXXXXXXXXXXXXXXXXXELGVRLGEEVGYAIRFEDRTSERTLIKHLTDGALLREILSNPELSPCSVLISDEAHERSLNTDILLGLVKRSANLRASNSKSLTTSATLDGEKASKLLFHRPTLNAPGKLDPVEILHS 652 +LPI +E++V+ N + +VIGETGSGK + +Q L G T G IG E G LG+EVGY IRFED TS T+IK++TDG LLRE L +P+L+ ++++ DEAHER+++TD+L GL+K++ R + K + TSATLD K S+ + P PG+ PVEIL++ Sbjct: 588 SLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKR-QDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYT 773
BLAST of EY753755 vs. ExPASy Swiss-Prot
Match: DHX8_HUMAN (ATP-dependent RNA helicase DHX8 OS=Homo sapiens GN=DHX8 PE=1 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 4.145e-36 Identity = 80/187 (42.78%), Postives = 114/187 (60.96%), Query Frame = 2 Query: 92 NLPILHSEEKIVETAEQNPVAVVIGETGSGKISLFSQILHRRGVTRSGSIGXXXXXXXXXXXXXXXXXXELGVRLGEEVGYAIRFEDRTSERTLIKHLTDGALLREILSNPELSPCSVLISDEAHERSLNTDILLGLVKRSANLRASNSKSLTTSATLDGEKASKLLFHRPTLNAPGKLDPVEILHS 652 +LPI +E++V+ N + +VIGETGSGK + +Q L G T G IG E G LG+EVGY IRFED TS T+IK++TDG LLRE L +P+L+ ++++ DEAHER+++TD+L GL+K++ R + K + TSATLD K S+ + P PG+ PVEIL++ Sbjct: 564 SLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKR-QDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYT 749
BLAST of EY753755 vs. ExPASy Swiss-Prot
Match: DHX8_ARATH (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase OS=Arabidopsis thaliana GN=At3g26560 PE=1 SV=2) HSP 1 Score: 152.14 bits (383), Expect = 4.145e-36 Identity = 87/197 (44.16%), Postives = 116/197 (58.88%), Query Frame = 2 Query: 62 SKPRVNGSMANLPILHSEEKIVETAEQNPVAVVIGETGSGKISLFSQILHRRGVTRSGSIGXXXXXXXXXXXXXXXXXXELGVRLGEEVGYAIRFEDRTSERTLIKHLTDGALLREILSNPELSPCSVLISDEAHERSLNTDILLGLVKRSANLRASNSKSLTTSATLDGEKASKLLFHRPTLNAPGKLDPVEILHS 652 SK + +LPI ++++++ N V VVIGETGSGK + +Q L G T G IG E G RLGEEVGYAIRFED T T+IK++TDG LLREIL + LS SV++ DEAHER+++TD+L GL+K+ R + + + TSATLD EK S F+ PG+ PVEIL++ Sbjct: 504 SKLSIQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMK-RRLDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYT 699
BLAST of EY753755 vs. ExPASy Swiss-Prot
Match: PRP16_SCHPO (Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16 OS=Schizosaccharomyces pombe GN=prp16 PE=2 SV=2) HSP 1 Score: 146.362 bits (368), Expect = 1.513e-34 Identity = 83/191 (43.46%), Postives = 110/191 (57.59%), Query Frame = 2 Query: 95 LPILHSEEKIVETAEQNPVAVVIGETGSGKISLFSQILHRRGVTRSGSIGXXXXXXXXXXXXXXXXXXELGVRLGEEVGYAIRFEDRTSERTLIKHLTDGALLREILSNPELSPCSVLISDEAHERSLNTDILLGLVKRSANLRASNSKSLTTSATLDGEKASKLLFHRPTLNAPGKLDPVEILHSTAASS 667 LP E+++ N V +V+GETGSGK + +Q L+ G R+G IG E+GVRLG VGY+IRFED T T+IK++TDG LLRE L L SV+I DEAHERSLNTDIL+GL+K+ + R + K L TSAT++ +K S P PG+ PV+I+ + A S Sbjct: 492 LPAFAVREQLLSVIRDNQVLIVVGETGSGKTTQLAQFLYEDGYHRNGMIGCTQPRRVAAMSVAKRVSEEMGVRLGSTVGYSIRFEDVTGPDTVIKYMTDGVLLRESLMQNNLEKYSVIIMDEAHERSLNTDILMGLLKKVLS-RRRDIKLLVTSATMNSQKFSDFFGGAPQFTIPGRTYPVDIMFAKAPCS 681 HSP 2 Score: 21.557 bits (44), Expect = 1.513e-34 Identity = 8/17 (47.06%), Postives = 12/17 (70.59%), Query Frame = 3 Query: 681 SALQPALDIHAPRPAGD 731 +A++ L IH +PAGD Sbjct: 686 AAVRQVLQIHLSQPAGD 702
BLAST of EY753755 vs. ExPASy Swiss-Prot
Match: MOG5_CAEEL (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5 OS=Caenorhabditis elegans GN=mog-5 PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 2.274e-34 Identity = 85/203 (41.87%), Postives = 117/203 (57.64%), Query Frame = 2 Query: 71 RVNGSMA----NLPILHSEEKIVETAEQNPVAVVIGETGSGKISLFSQILHRRGVTRSGSIGXXXXXXXXXXXXXXXXXXELGVRLGEEVGYAIRFEDRTSERTLIKHLTDGALLREILSNPELSPCSVLISDEAHERSLNTDILLGLVKRSANLRASNSKSLTTSATLDGEKASKLLFHRPTLNAPGKLDPVEILHSTAASS 667 R N SM +LPI ++ ++E N + VV+GETGSGK + +Q G+ R G IG E G +LG +VGY IRFED TS+ T+IK++TDG LLRE L +P+LS S+++ DEAHER+++TD+L GL+K +A R K + TSATLD K S+ P PG+ PVEIL++ S Sbjct: 528 RTNLSMVEQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGRRGKIGCTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECLIDPDLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKR-PELKLIITSATLDSVKFSEYFLEAPIFTIPGRTFPVEILYTREPES 729
BLAST of EY753755 vs. ExPASy Swiss-Prot
Match: MOG1_CAEEL (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1 OS=Caenorhabditis elegans GN=mog-1 PE=2 SV=2) HSP 1 Score: 146.362 bits (368), Expect = 2.274e-34 Identity = 81/187 (43.32%), Postives = 112/187 (59.89%), Query Frame = 2 Query: 95 LPILHSEEKIVETAEQNPVAVVIGETGSGKISLFSQILHRRGVTRSGSIGXXXXXXXXXXXXXXXXXXELGVRLGEEVGYAIRFEDRTSERTLIKHLTDGALLREILSNPELSPCSVLISDEAHERSLNTDILLGLVKRSANLRASNSKSLTTSATLDGEKASKLL-FHRPTLNAPGKLDPVEILHS 652 LP+ +K++ +N V +++GETGSGK + +Q L G SG IG E+GV LG++VGYAIRFED TSE+T+IK++TDG LLRE L + L S +I DEAHERSLNTD+L GL++ RA + K + TSAT+D +K + + PT PG+ PVE+ H+ Sbjct: 441 LPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFGDSGLIGCTQPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGDGSLDQYSAIIMDEAHERSLNTDVLFGLLREVIAKRA-DLKLIVTSATMDADKFADFFGGNCPTFTIPGRTFPVELFHA 626
BLAST of EY753755 vs. ExPASy Swiss-Prot
Match: DHX16_DICDI (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS=Dictyostelium discoideum GN=dhx16 PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.879e-34 Identity = 75/178 (42.13%), Postives = 111/178 (62.36%), Query Frame = 2 Query: 92 NLPILHSEEKIVETAEQNPVAVVIGETGSGKISLFSQILHRRGVTRSGSIGXXXXXXXXXXXXXXXXXXELGVRLGEEVGYAIRFEDRTSERTLIKHLTDGALLREILSNPELSPCSVLISDEAHERSLNTDILLGLVKRSANLRASNSKSLTTSATLDGEKASKLLFHRPTLNAPGK 625 +LP+ E++++ + V +++GETGSGK + Q LH G +++G IG E+G +LG EVGY+IRFED TS++T+++++TDG L+RE L+ P+L+ SVLI DEAHER+L+TDIL GL+K R + K L +SAT+D E+ S PT N PG+ Sbjct: 466 SLPVYPYREQLIDAVREYQVLIIVGETGSGKTTQIPQYLHEAGFSKTGKIGCTQPRRVAAMSVAARVAEEVGCKLGNEVGYSIRFEDCTSQKTVLQYMTDGMLVREFLTAPDLASYSVLIIDEAHERTLHTDILFGLLKDITRFR-PDLKLLISSATMDAERFSDYFDGAPTFNIPGR 642
BLAST of EY753755 vs. ExPASy Swiss-Prot
Match: DHX8_DICDI (ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum GN=dhx8 PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 5.067e-34 Identity = 85/214 (39.72%), Postives = 119/214 (55.61%), Query Frame = 2 Query: 14 PRVRAIXSGA-LXWQKTSKPRVNGSMANLPILHSEEKIVETAEQNPVAVVIGETGSGKISLFSQILHRRGVTRSGSIGXXXXXXXXXXXXXXXXXXELGVRLGEEVGYAIRFEDRTSERTLIKHLTDGALLREILSNPELSPCSVLISDEAHERSLNTDILLGLVKRSANLRASNSKSLTTSATLDGEKASKLLFHRPTLNAPGKLDPVEILHS 652 P + + G+ + + K + + +LPI E ++ ++ + VVIGETGSGK + +Q L G G IG E G +LG+EVGYAIRFED TS T+IK +TDG LLRE L +P LS SV+I DEAHER+++TD+L GL+K++ R K L TSATL+ EK SK + PG+ PV+I ++ Sbjct: 480 PEWKKVTQGSHIQYGKATSRSIKEQRESLPIFPLREAFLQAVSEHQLLVVIGETGSGKTTQMAQYLAEAGYGTRGKIGCTQPRRVAAMSVSKRVAEEFGCQLGQEVGYAIRFEDCTSPETIIKFMTDGILLRECLLDPNLSAYSVIILDEAHERTISTDVLFGLLKQALQ-RRPELKVLITSATLEAEKFSKYFMNAQLFIIPGRTFPVDIRYT 692 The following BLAST results are available for this feature:
BLAST of EY753755 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >EY753755 ID=EY753755; Name=EY753755; organism=Citrus sinensis; type=EST; length=935bpback to top |