EY753719
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY753719 vs. ExPASy Swiss-Prot
Match: NUDC_MOUSE (Nuclear migration protein nudC OS=Mus musculus GN=Nudc PE=1 SV=1) HSP 1 Score: 55.8398 bits (133), Expect = 1.374e-13 Identity = 24/47 (51.06%), Postives = 36/47 (76.60%), Query Frame = 1 Query: 601 KSRVVLCEIKKDHLKVGLKGQPPIIDGELHMAVKPDDWYWSIEDQKL 741 K + V+ +I++ HL+VGLKGQPP++DGEL+ VK ++ W IED K+ Sbjct: 195 KGKDVVVDIQRRHLRVGLKGQPPVVDGELYNEVKVEESSWLIEDGKV 241 HSP 2 Score: 41.5874 bits (96), Expect = 1.374e-13 Identity = 20/45 (44.44%), Postives = 24/45 (53.33%), Query Frame = 2 Query: 452 QKAPPPEPQLDANGNPARAPNKGNGLDLENYSWTQILQEVTVSVP 586 Q A E + D PN GNG DL NY WTQ L E+ ++VP Sbjct: 143 QDAEDEEDEEDEKDKGKLKPNLGNGADLPNYRWTQTLAELDLAVP 187
BLAST of EY753719 vs. ExPASy Swiss-Prot
Match: NUDC_RAT (Nuclear migration protein nudC OS=Rattus norvegicus GN=Nudc PE=1 SV=1) HSP 1 Score: 53.1434 bits (126), Expect = 6.597e-13 Identity = 24/47 (51.06%), Postives = 35/47 (74.47%), Query Frame = 1 Query: 601 KSRVVLCEIKKDHLKVGLKGQPPIIDGELHMAVKPDDWYWSIEDQKL 741 K + V+ +I++ HL+VGLKGQ P+IDGEL+ VK ++ W IED K+ Sbjct: 195 KGKDVVVDIQRRHLRVGLKGQAPVIDGELYNEVKVEESSWLIEDGKV 241 HSP 2 Score: 41.9726 bits (97), Expect = 6.597e-13 Identity = 20/45 (44.44%), Postives = 24/45 (53.33%), Query Frame = 2 Query: 452 QKAPPPEPQLDANGNPARAPNKGNGLDLENYSWTQILQEVTVSVP 586 Q A E + D PN GNG DL NY WTQ L E+ ++VP Sbjct: 143 QDAEEEEDEEDEKDKGKLKPNLGNGADLPNYRWTQTLSELDLAVP 187
BLAST of EY753719 vs. ExPASy Swiss-Prot
Match: NUDC_BOVIN (Nuclear migration protein nudC OS=Bos taurus GN=NUDC PE=2 SV=1) HSP 1 Score: 53.1434 bits (126), Expect = 1.877e-12 Identity = 24/47 (51.06%), Postives = 35/47 (74.47%), Query Frame = 1 Query: 601 KSRVVLCEIKKDHLKVGLKGQPPIIDGELHMAVKPDDWYWSIEDQKL 741 K + V+ +I++ HL+VGLKGQP I+DGEL+ VK ++ W IED K+ Sbjct: 195 KGKDVVVDIQRRHLRVGLKGQPAIVDGELYNEVKVEESSWLIEDGKV 241 HSP 2 Score: 40.4318 bits (93), Expect = 1.877e-12 Identity = 19/45 (42.22%), Postives = 25/45 (55.56%), Query Frame = 2 Query: 452 QKAPPPEPQLDANGNPARAPNKGNGLDLENYSWTQILQEVTVSVP 586 Q+A E + D PN GNG DL +Y WTQ L E+ ++VP Sbjct: 143 QEAEEEEEEDDEKDKGKLKPNLGNGADLPSYRWTQTLSELDLAVP 187
BLAST of EY753719 vs. ExPASy Swiss-Prot
Match: NUDC_HUMAN (Nuclear migration protein nudC OS=Homo sapiens GN=NUDC PE=1 SV=1) HSP 1 Score: 52.373 bits (124), Expect = 5.338e-12 Identity = 24/47 (51.06%), Postives = 35/47 (74.47%), Query Frame = 1 Query: 601 KSRVVLCEIKKDHLKVGLKGQPPIIDGELHMAVKPDDWYWSIEDQKL 741 K + ++ +I++ HL+VGLKGQP IIDGEL+ VK ++ W IED K+ Sbjct: 194 KGKDMVVDIQRRHLRVGLKGQPAIIDGELYNEVKVEESSWLIEDGKV 240 HSP 2 Score: 39.6614 bits (91), Expect = 5.338e-12 Identity = 16/26 (61.54%), Postives = 19/26 (73.08%), Query Frame = 2 Query: 509 PNKGNGLDLENYSWTQILQEVTVSVP 586 PN GNG DL NY WTQ L E+ ++VP Sbjct: 161 PNLGNGADLPNYRWTQTLSELDLAVP 186
BLAST of EY753719 vs. ExPASy Swiss-Prot
Match: NUDC_CHICK (Nuclear migration protein nudC OS=Gallus gallus GN=NUDC PE=2 SV=1) HSP 1 Score: 49.6766 bits (117), Expect = 6.922e-12 Identity = 23/46 (50.00%), Postives = 32/46 (69.57%), Query Frame = 1 Query: 601 KSRVVLCEIKKDHLKVGLKGQPPIIDGELHMAVKPDDWYWSIEDQK 738 K + V+ +I++ L+VGLKG PP+IDGEL VK ++ W IED K Sbjct: 204 KGKDVVVDIQRRRLRVGLKGHPPVIDGELFNEVKVEESSWLIEDGK 249 HSP 2 Score: 41.9726 bits (97), Expect = 6.922e-12 Identity = 18/44 (40.91%), Postives = 24/44 (54.55%), Query Frame = 2 Query: 455 KAPPPEPQLDANGNPARAPNKGNGLDLENYSWTQILQEVTVSVP 586 K + + D N PN GNG DL NY WTQ L E+ +++P Sbjct: 153 KQETDDEEKDENDKGKLKPNAGNGADLPNYRWTQTLSELDLAIP 196 The following BLAST results are available for this feature:
BLAST of EY753719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY753719 ID=EY753719; Name=EY753719; organism=Citrus sinensis; type=EST; length=876bpback to top |