EY753573
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY753573 vs. ExPASy Swiss-Prot
Match: PSBS_SPIOL (Photosystem II 22 kDa protein, chloroplastic OS=Spinacia oleracea GN=PSBS PE=1 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 1.005e-56 Identity = 132/236 (55.93%), Postives = 151/236 (63.98%), Query Frame = 3 Query: 84 MAQTMLLMS-GVSTSHAGNLKRDSLVTFQTQMLRP-IFFSHLMFNPLSNEXXXXXXXXXXXXXXXXXXXFXXXXXXXXXXXXVESKPKVEDXXXXXXXXXXXXKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPXXXXXXXXXXXGAIGALGDRGKFVDEPDEPTGLGRAVIPPGKSLRSALGLKEGGPIFGFTKSNELFVGRLAQLGIAFSLVGES*QGK 785 MAQ MLLM GVST++ +LKR++L+ Q Q ++P S+L F+PL + + K KVED K+NELFVGRVAMIGFAASLLGEGITGKGIL+QLNLETGIPIYEAEP GAIGALGDRG+FVDEP TGL +AVIPPGK +RSALGLK GP+FGFTKSNELFVGRLAQLG AFSL+GE GK Sbjct: 1 MAQAMLLMMPGVSTTNTIDLKRNALLKLQIQKIKPKSSTSNLFFSPLPSSSSSSSTVFKTLALFKSKAKAPKKVE--------KPKLKVEDGLFGTSGGIGFTKENELFVGRVAMIGFAASLLGEGITGKGILSQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVDEP--TTGLEKAVIPPGKDVRSALGLKTKGPLFGFTKSNELFVGRLAQLGFAFSLIGEIITGK 226 HSP 2 Score: 25.0238 bits (53), Expect = 1.005e-56 Identity = 11/19 (57.89%), Postives = 14/19 (73.68%), Query Frame = 1 Query: 802 HIETWIPINEIDHLCLFTV 858 +IET +PINEI+ L L V Sbjct: 233 NIETGVPINEIEPLVLLNV 251 HSP 3 Score: 74.3294 bits (181), Expect = 1.115e-12 Identity = 40/75 (53.33%), Postives = 48/75 (64.00%), Query Frame = 3 Query: 387 KQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPXXXXXXXXXXXGAIGALGDRGKFVDEPDE 611 K NELFVGR+A +GFA SL+GE ITGKG LAQLN+ETG+PI E EP AI GKF+ + +E Sbjct: 200 KSNELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAINP--GTGKFITDDEE 272
BLAST of EY753573 vs. ExPASy Swiss-Prot
Match: PSBS_SOLLC (Photosystem II 22 kDa protein, chloroplastic OS=Solanum lycopersicum GN=PSBS PE=3 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 8.388e-56 Identity = 111/153 (72.55%), Postives = 119/153 (77.78%), Query Frame = 3 Query: 327 ESKPKVEDXXXXXXXXXXXXKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPXXXXXXXXXXXGAIGALGDRGKFVDEPDEPTGLGRAVIPPGKSLRSALGLKEGGPIFGFTKSNELFVGRLAQLGIAFSLVGES*QGK 785 + K KVED KQNELFVGRVAMIGFAASLLGE ITGKGILAQLNLETGIPIYEAEP GAIGALGDRGKFVD+P PTGL +AVIPPGKS +SALGL EGGP+FGFTK+NELFVGRLAQLGIAFS++GE GK Sbjct: 77 KEKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGKFVDDPTPPTGLEKAVIPPGKSFKSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGK 229 HSP 2 Score: 25.7942 bits (55), Expect = 8.388e-56 Identity = 10/20 (50.00%), Postives = 15/20 (75.00%), Query Frame = 1 Query: 802 HIETWIPINEIDHLCLFTVS 861 + ET +PINEI+ L LF ++ Sbjct: 236 NFETGVPINEIEPLLLFNIA 255 HSP 3 Score: 70.0922 bits (170), Expect = 2.103e-11 Identity = 38/75 (50.67%), Postives = 46/75 (61.33%), Query Frame = 3 Query: 387 KQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPXXXXXXXXXXXGAIGALGDRGKFVDEPDE 611 K NELFVGR+A +G A S++GE ITGKG LAQLN ETG+PI E EP AI GKF+ + +E Sbjct: 203 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLNFETGVPINEIEPLLLFNIAFFFFAAINP--GTGKFITDEEE 275
BLAST of EY753573 vs. ExPASy Swiss-Prot
Match: PSBS_SOLSG (Photosystem II 22 kDa protein, chloroplastic OS=Solanum sogarandinum GN=PSBS PE=2 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 2.635e-54 Identity = 108/153 (70.59%), Postives = 118/153 (77.12%), Query Frame = 3 Query: 327 ESKPKVEDXXXXXXXXXXXXKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPXXXXXXXXXXXGAIGALGDRGKFVDEPDEPTGLGRAVIPPGKSLRSALGLKEGGPIFGFTKSNELFVGRLAQLGIAFSLVGES*QGK 785 + K KVED KQNELFVGRVAMIGFAASLLGE ITGKGILAQLNLETGIPIYEAEP GAIGALGDRG+F+D+P TGL +AVIPPGKS +SALGL EGGP+FGFTK+NELFVGRLAQLGIAFS++GE GK Sbjct: 77 KEKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGRFIDDPAPATGLEKAVIPPGKSFKSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGK 229 HSP 2 Score: 25.7942 bits (55), Expect = 2.635e-54 Identity = 10/20 (50.00%), Postives = 15/20 (75.00%), Query Frame = 1 Query: 802 HIETWIPINEIDHLCLFTVS 861 + ET +PINEI+ L LF ++ Sbjct: 236 NFETGVPINEIEPLLLFNIA 255 HSP 3 Score: 70.0922 bits (170), Expect = 2.103e-11 Identity = 38/75 (50.67%), Postives = 46/75 (61.33%), Query Frame = 3 Query: 387 KQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPXXXXXXXXXXXGAIGALGDRGKFVDEPDE 611 K NELFVGR+A +G A S++GE ITGKG LAQLN ETG+PI E EP AI GKF+ + +E Sbjct: 203 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLNFETGVPINEIEPLLLFNIAFFFFAAINP--GTGKFITDEEE 275
BLAST of EY753573 vs. ExPASy Swiss-Prot
Match: PSBS_TOBAC (Photosystem II 22 kDa protein, chloroplastic OS=Nicotiana tabacum GN=PSBS PE=2 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 3.735e-53 Identity = 107/151 (70.86%), Postives = 115/151 (76.16%), Query Frame = 3 Query: 333 KPKVEDXXXXXXXXXXXXKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPXXXXXXXXXXXGAIGALGDRGKFVDEPDEPTGLGRAVIPPGKSLRSALGLKEGGPIFGFTKSNELFVGRLAQLGIAFSLVGES*QGK 785 K KVED KQNELFVGRVAMIGFAASLLGE ITGKGILAQLNLETGIPIYEAEP GAIGAL DRGKF+D+P PTGL +AVIPPGK +SALGL EGGP+F FTK+NELFVGRLAQLGIAFS++GE GK Sbjct: 77 KEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALEDRGKFIDDPAPPTGLDKAVIPPGKGFKSALGLSEGGPLFEFTKANELFVGRLAQLGIAFSIIGEIITGK 227 HSP 2 Score: 25.409 bits (54), Expect = 3.735e-53 Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 1 Query: 802 HIETWIPINEIDHLCLFTV 858 + ET +PINEI+ L LF + Sbjct: 234 NFETGVPINEIEPLLLFNI 252 HSP 3 Score: 70.4774 bits (171), Expect = 1.611e-11 Identity = 39/75 (52.00%), Postives = 46/75 (61.33%), Query Frame = 3 Query: 387 KQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPXXXXXXXXXXXGAIGALGDRGKFVDEPDE 611 K NELFVGR+A +G A S++GE ITGKG LAQLN ETG+PI E EP AI GKFV + +E Sbjct: 201 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLNFETGVPINEIEPLLLFNIVFFFVAAINP--GTGKFVTDEEE 273
BLAST of EY753573 vs. ExPASy Swiss-Prot
Match: PSBS_ARATH (Photosystem II 22 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=PSBS PE=1 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 1.834e-52 Identity = 110/151 (72.85%), Postives = 118/151 (78.15%), Query Frame = 3 Query: 333 KPKVEDXXXXXXXXXXXXKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPXXXXXXXXXXXGAIGALGDRGKFVDEPDEPTGLGRAVIPPGKSLRSALGLKEGGPIFGFTKSNELFVGRLAQLGIAFSLVGES*QGK 785 K KVED K NELFVGRVAMIGFAASLLGE +TGKGILAQLNLETGIPIYEAEP GAIGALGDRGKFVD+P PTGL +AVIPPGK++RSALGLKE GP+FGFTK+NELFVGRLAQLGIAFSL+GE GK Sbjct: 69 KSKVEDGIFGTSGGIGFTKANELFVGRVAMIGFAASLLGEALTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDDP--PTGLEKAVIPPGKNVRSALGLKEQGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGK 217 HSP 2 Score: 22.3274 bits (46), Expect = 1.834e-52 Identity = 10/20 (50.00%), Postives = 14/20 (70.00%), Query Frame = 1 Query: 802 HIETWIPINEIDHLCLFTVS 861 +IET IPI +I+ L L V+ Sbjct: 224 NIETGIPIQDIEPLVLLNVA 243 HSP 3 Score: 70.4774 bits (171), Expect = 1.611e-11 Identity = 39/75 (52.00%), Postives = 46/75 (61.33%), Query Frame = 3 Query: 387 KQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPXXXXXXXXXXXGAIGALGDRGKFVDEPDE 611 K NELFVGR+A +G A SL+GE ITGKG LAQLN+ETGIPI + EP AI GKF+ + E Sbjct: 191 KANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIQDIEPLVLLNVAFFFFAAINP--GNGKFITDDGE 263 The following BLAST results are available for this feature:
BLAST of EY753573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY753573 ID=EY753573; Name=EY753573; organism=Citrus sinensis; type=EST; length=946bpback to top |