EY753543
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY753543 vs. ExPASy Swiss-Prot
Match: CAF1J_ARATH (Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana GN=CAF1-10 PE=2 SV=1) HSP 1 Score: 267.314 bits (682), Expect = 1.155e-73 Identity = 128/170 (75.29%), Postives = 145/170 (85.29%), Query Frame = 3 Query: 51 DEIQIREVWNDNLEEEFALIREIVDKYNYIAMDTEFPGVVLRPVGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNLIDDIFASDSVELLHQCGIDFKKNNEKGIDVNRFGELLMSSGIGLNDVVRWVTFHSGMILVICLKL*PCR 560 D I IREVW+ NL EEFALIREIVDK++YIAMDTEFPGVVL+PV FK ND NY+TLK+NVD+LKLIQ+GLTFSDENGNLPTCGTDKFCIWQFNFREFN+ +DI+AS+S+ELL QCGIDFKKN EKGIDV RFGEL+MSSGI LND + WVTFH G +KL C+ Sbjct: 8 DSIMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNNDLNYRTLKENVDLLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIYASESIELLRQCGIDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCK 177 HSP 2 Score: 31.5722 bits (70), Expect = 1.155e-73 Identity = 19/58 (32.76%), Postives = 29/58 (50.00%), Query Frame = 1 Query: 601 MYFPVVLKSNLWMKFCNNPLVWVTKPAGLLEGDPIGYCYPPGSNSSVLPPHLGTSRNL 774 +YFP V M FCN + + A L+ + +G C+ GS+S + LG+ R L Sbjct: 192 VYFPTVYDIKHLMTFCNGLFGGLNRLAELMGVERVGICHQAGSDSLLT---LGSFRKL 246
BLAST of EY753543 vs. ExPASy Swiss-Prot
Match: CAF1F_ARATH (Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana GN=CAF1-6 PE=2 SV=1) HSP 1 Score: 244.588 bits (623), Expect = 2.786e-69 Identity = 119/176 (67.61%), Postives = 139/176 (78.98%), Query Frame = 3 Query: 51 DEIQIREVWNDNLEEEFALIREIVDKYNYIAMDTEFPGVVLRPVGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNLIDDIFASDSVELLHQCGIDFKKNNEKGIDVNRFGELLMSSGIGLNDVVRWVTFHSGMILVICLKL*PCRS*RDPQ 578 D IQIREVWNDNL+EE LIR++VD + Y+AMDTEFPG+V+RPVG FK+ DY+Y+TLK NV++LK+IQLGLTFS+E GNLPTCGTDK+CIWQFNFREF+L DIFA DS+ELL Q GID KN GID RF ELLMSSGI LN+ V WVTFHSG LKL C++ D Q Sbjct: 8 DSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADYHYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIELLKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPDSQ 183 HSP 2 Score: 39.6614 bits (91), Expect = 2.786e-69 Identity = 21/48 (43.75%), Postives = 28/48 (58.33%), Query Frame = 1 Query: 592 LDNMYFPVVLKSNLWMKFCNNPLVWVTKPAGLLEGDPIGYCYPPGSNS 735 L N+YFP V MKFCN+ + K A LLE + +G C+ GS+S Sbjct: 189 LINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDS 236
BLAST of EY753543 vs. ExPASy Swiss-Prot
Match: CAF1G_ARATH (Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana GN=CAF1-7 PE=2 SV=2) HSP 1 Score: 248.44 bits (633), Expect = 4.737e-69 Identity = 122/179 (68.16%), Postives = 142/179 (79.33%), Query Frame = 3 Query: 51 DEIQIREVWNDNLEEEFALIREIVDKYNYIAMDTEFPGVVLRPVGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTD-KFCIWQFNFREFNLIDDIFASDSVELLHQCGIDFKKNNEKGIDVNRFGELLMSSGIGLNDVVRWVTFHSGMILVICLKL*PCRS*RDPQLG 584 D IQIREVWNDNLE E ALIRE+VD + ++AMDTEFPG+V RPVG FK +Y+Y+TLK NV++LK+IQLGLTFSDE GNLPTCGTD K+CIWQFNFREF+L DI+A+DS+ELL Q GIDF KNNE GID RF ELLMSSGI LN+ V WVTFHSG LKL C++ + Q G Sbjct: 8 DSIQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFKTNTEYHYETLKTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIELLRQSGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPETQTG 186 HSP 2 Score: 35.039 bits (79), Expect = 4.737e-69 Identity = 18/46 (39.13%), Postives = 27/46 (58.70%), Query Frame = 1 Query: 598 NMYFPVVLKSNLWMKFCNNPLVWVTKPAGLLEGDPIGYCYPPGSNS 735 ++YFP V MKFCN+ + K A LL+ + +G C+ GS+S Sbjct: 192 SVYFPRVYDIKHLMKFCNSLHGGLNKLAELLDVERVGICHQAGSDS 237
BLAST of EY753543 vs. ExPASy Swiss-Prot
Match: CAF1B_ARATH (Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana GN=CAF1-2 PE=2 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 3.684e-58 Identity = 108/172 (62.79%), Postives = 127/172 (73.84%), Query Frame = 3 Query: 51 DEIQIREVWNDNLEEEFALIREIVDKYNYIAMDTEFPGVVLRPVGAFKNIN------DYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNLIDDIFASDSVELLHQCGIDFKKNNEKGIDVNRFGELLMSSGIGLNDVVRWVTFHSGMILVICLKL 548 D I+IREVWN NLE+E ALI + +D + Y+AMDTEFPG+V + V A N N +YNY TLK NV+MLKLIQLGLT SDE GNLPTCGT+K CIWQFNFREFN+I D+FA DS+ELL + ID +KNNE G+D RF ELLM SG+ LND + WVTFH G LKL Sbjct: 12 DTIEIREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYNYDTLKANVNMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALDSIELLRKSAIDLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLKL 183 HSP 2 Score: 26.9498 bits (58), Expect = 3.684e-58 Identity = 16/44 (36.36%), Postives = 21/44 (47.73%), Query Frame = 1 Query: 604 YFPVVLKSNLWMKFCNNPLVWVTKPAGLLEGDPIGYCYPPGSNS 735 +FPVV M FC N + K A LL +G + GS+S Sbjct: 203 FFPVVYDIKYLMGFCTNLYGGLEKIAELLGVKRVGISHQAGSDS 246 HSP 3 Score: 21.1718 bits (43), Expect = 3.684e-58 Identity = 10/23 (43.48%), Postives = 14/23 (60.87%), Query Frame = 2 Query: 524 DFGYLP*VVTLPELTRSPAGFFD 592 DFGYL +++ EL + FFD Sbjct: 176 DFGYLLKLLSGKELPEEISDFFD 198
BLAST of EY753543 vs. ExPASy Swiss-Prot
Match: CNOT7_MOUSE (CCR4-NOT transcription complex subunit 7 OS=Mus musculus GN=Cnot7 PE=1 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.572e-44 Identity = 87/154 (56.49%), Postives = 114/154 (74.03%), Query Frame = 3 Query: 60 QIREVWNDNLEEEFALIREIVDKYNYIAMDTEFPGVVLRPVGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNLIDDIFASDSVELLHQCGIDFKKNNEKGIDVNRFGELLMSSGIGLNDVVRWVTFHSG 521 +I EVW NL+EE IR+++ KYNY+AMDTEFPGVV RP+G F++ DY YQ L+ NVD+LK+IQLGLTF +E G P GT WQFNF+ FNL +D++A DS+ELL GI FKK+ E+GI+ F ELLM+SG+ L + V+W++FHSG Sbjct: 11 RICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPP-GTS---TWQFNFK-FNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSG 159 HSP 2 Score: 25.409 bits (54), Expect = 3.572e-44 Identity = 15/45 (33.33%), Postives = 23/45 (51.11%), Query Frame = 1 Query: 601 MYFPVVLKSNLWMKFCNNPLVWVTKPAGLLEGDPIGYCYPPGSNS 735 ++FPV+ MK C N + + A LE + IG + GS+S Sbjct: 187 LFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDS 231
BLAST of EY753543 vs. ExPASy Swiss-Prot
Match: CNOT7_HUMAN (CCR4-NOT transcription complex subunit 7 OS=Homo sapiens GN=CNOT7 PE=1 SV=3) HSP 1 Score: 174.866 bits (442), Expect = 3.572e-44 Identity = 87/154 (56.49%), Postives = 114/154 (74.03%), Query Frame = 3 Query: 60 QIREVWNDNLEEEFALIREIVDKYNYIAMDTEFPGVVLRPVGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNLIDDIFASDSVELLHQCGIDFKKNNEKGIDVNRFGELLMSSGIGLNDVVRWVTFHSG 521 +I EVW NL+EE IR+++ KYNY+AMDTEFPGVV RP+G F++ DY YQ L+ NVD+LK+IQLGLTF +E G P GT WQFNF+ FNL +D++A DS+ELL GI FKK+ E+GI+ F ELLM+SG+ L + V+W++FHSG Sbjct: 11 RICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPP-GTS---TWQFNFK-FNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSG 159 HSP 2 Score: 25.409 bits (54), Expect = 3.572e-44 Identity = 15/45 (33.33%), Postives = 23/45 (51.11%), Query Frame = 1 Query: 601 MYFPVVLKSNLWMKFCNNPLVWVTKPAGLLEGDPIGYCYPPGSNS 735 ++FPV+ MK C N + + A LE + IG + GS+S Sbjct: 187 LFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDS 231
BLAST of EY753543 vs. ExPASy Swiss-Prot
Match: CNOT7_CHICK (CCR4-NOT transcription complex subunit 7 OS=Gallus gallus GN=CNOT7 PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.572e-44 Identity = 87/154 (56.49%), Postives = 114/154 (74.03%), Query Frame = 3 Query: 60 QIREVWNDNLEEEFALIREIVDKYNYIAMDTEFPGVVLRPVGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNLIDDIFASDSVELLHQCGIDFKKNNEKGIDVNRFGELLMSSGIGLNDVVRWVTFHSG 521 +I EVW NL+EE IR+++ KYNY+AMDTEFPGVV RP+G F++ DY YQ L+ NVD+LK+IQLGLTF +E G P GT WQFNF+ FNL +D++A DS+ELL GI FKK+ E+GI+ F ELLM+SG+ L + V+W++FHSG Sbjct: 11 RICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPP-GTS---TWQFNFK-FNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSG 159 HSP 2 Score: 25.409 bits (54), Expect = 3.572e-44 Identity = 15/45 (33.33%), Postives = 23/45 (51.11%), Query Frame = 1 Query: 601 MYFPVVLKSNLWMKFCNNPLVWVTKPAGLLEGDPIGYCYPPGSNS 735 ++FPV+ MK C N + + A LE + IG + GS+S Sbjct: 187 LFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDS 231
BLAST of EY753543 vs. ExPASy Swiss-Prot
Match: CNOT7_BOVIN (CCR4-NOT transcription complex subunit 7 OS=Bos taurus GN=CNOT7 PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.572e-44 Identity = 87/154 (56.49%), Postives = 114/154 (74.03%), Query Frame = 3 Query: 60 QIREVWNDNLEEEFALIREIVDKYNYIAMDTEFPGVVLRPVGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNLIDDIFASDSVELLHQCGIDFKKNNEKGIDVNRFGELLMSSGIGLNDVVRWVTFHSG 521 +I EVW NL+EE IR+++ KYNY+AMDTEFPGVV RP+G F++ DY YQ L+ NVD+LK+IQLGLTF +E G P GT WQFNF+ FNL +D++A DS+ELL GI FKK+ E+GI+ F ELLM+SG+ L + V+W++FHSG Sbjct: 11 RICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPP-GTS---TWQFNFK-FNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSG 159 HSP 2 Score: 25.409 bits (54), Expect = 3.572e-44 Identity = 15/45 (33.33%), Postives = 23/45 (51.11%), Query Frame = 1 Query: 601 MYFPVVLKSNLWMKFCNNPLVWVTKPAGLLEGDPIGYCYPPGSNS 735 ++FPV+ MK C N + + A LE + IG + GS+S Sbjct: 187 LFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDS 231
BLAST of EY753543 vs. ExPASy Swiss-Prot
Match: CAF1_SCHPO (Poly(A) ribonuclease pop2 OS=Schizosaccharomyces pombe GN=caf1 PE=1 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 1.071e-43 Identity = 86/161 (53.42%), Postives = 115/161 (71.43%), Query Frame = 3 Query: 63 IREVWNDNLEEEFALIREIVDKYNYIAMDTEFPGVVLRPVGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNLIDDIFASDSVELLHQCGIDFKKNNEKGIDVNRFGELLMSSGIGLNDVVRWVTFHSGMILVICLK 545 IR+VW+ NL++E LI ++++Y ++MDTEFPGVV RP+G FK+ +DY+YQTL+ NVD LK+IQ+GL SDE GN P + C WQFNF FNL DD++A +S+ELL + GIDFKK+ E GI+ F ELL+ SG+ L + V W+TFHSG LK Sbjct: 22 IRDVWSTNLQQEMNLIMSLIERYPVVSMDTEFPGVVARPLGVFKSSDDYHYQTLRANVDSLKIIQIGLALSDEEGNAPV----EACTWQFNF-TFNLQDDMYAPESIELLTKSGIDFKKHQEVGIEPADFAELLIGSGLVLQEEVTWITFHSGYDFAYLLK 177
BLAST of EY753543 vs. ExPASy Swiss-Prot
Match: CNOT7_DANRE (CCR4-NOT transcription complex subunit 7 OS=Danio rerio GN=cnot7 PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.342e-43 Identity = 88/154 (57.14%), Postives = 113/154 (73.38%), Query Frame = 3 Query: 60 QIREVWNDNLEEEFALIREIVDKYNYIAMDTEFPGVVLRPVGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNLIDDIFASDSVELLHQCGIDFKKNNEKGIDVNRFGELLMSSGIGLNDVVRWVTFHSG 521 +I EVW NLEEE IR++ K+NYIAMDTEFPGVV RP+G F++ DY YQ L+ NVD+LK+IQLGLTF +E G P GT WQFNF+ FNL +D++A DS+ELL GI FKK+ E+GI+ F ELLM+SG+ L + V+W++FHSG Sbjct: 11 RICEVWACNLEEEMKRIRQVTRKFNYIAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPP-GTS---TWQFNFK-FNLTEDMYAQDSIELLTSSGIQFKKHEEEGIETMYFAELLMTSGVVLCEGVKWLSFHSG 159 HSP 2 Score: 25.0238 bits (53), Expect = 1.342e-43 Identity = 14/45 (31.11%), Postives = 23/45 (51.11%), Query Frame = 1 Query: 601 MYFPVVLKSNLWMKFCNNPLVWVTKPAGLLEGDPIGYCYPPGSNS 735 ++FP++ MK C N + + A LE + IG + GS+S Sbjct: 187 LFFPIIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDS 231 The following BLAST results are available for this feature:
BLAST of EY753543 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY753543 ID=EY753543; Name=EY753543; organism=Citrus sinensis; type=EST; length=868bpback to top |