EY753491

Overview
NameEY753491
Unique NameEY753491
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length944
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY753491_ssr468 microsatellite EY753491_ssr468:468..479. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY753491 vs. ExPASy Swiss-Prot
Match: NLTP_HELAN (Non-specific lipid-transfer protein OS=Helianthus annuus PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.830e-31
Identity = 63/97 (64.95%), Postives = 75/97 (77.32%), Query Frame = 1
Query:  127 PVTNAITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 417
            P T A++CGQV++SLAPCI +L  GG  PP  CCSGV+SLN AA+TTPDRQAAC CLK AY +I G+    AA  P +CGV IPYKISPSTDCS+V+
Sbjct:   21 PYTEALSCGQVSSSLAPCISYLTKGGAVPPA-CCSGVKSLNSAAKTTPDRQAACGCLKSAYNSISGVNAGNAASFPGKCGVSIPYKISPSTDCSKVQ 116          
BLAST of EY753491 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUDU (Non-specific lipid-transfer protein 1 OS=Prunus dulcis PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.954e-31
Identity = 58/97 (59.79%), Postives = 77/97 (79.38%), Query Frame = 1
Query:  127 PVTNAITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 417
            P+  AITCGQV+++LAPCIP+ + GG   PP CC+G+R++N  ARTTPDRQAACNCLK+   ++ G+ PN AA LP +CGV IPY+ISPST+C+ V+
Sbjct:   22 PIAQAITCGQVSSNLAPCIPY-VRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVNIPYQISPSTNCANVK 117          
BLAST of EY753491 vs. ExPASy Swiss-Prot
Match: NLTP_MALDO (Non-specific lipid-transfer protein OS=Malus domestica GN=MALD3 PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 2.023e-30
Identity = 60/96 (62.50%), Postives = 76/96 (79.17%), Query Frame = 1
Query:  130 VTNAITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 417
            V +AITCGQVT+SLAPCI ++ +GG  PP  CC+G+R++NG ARTT DRQ ACNCLK   G+I G+ PN AAGLP +CGV +PYKIS ST+C+ V+
Sbjct:   21 VAHAITCGQVTSSLAPCIGYVRSGGAVPPA-CCNGIRTINGLARTTADRQTACNCLKNLAGSISGVNPNNAAGLPGKCGVNVPYKISTSTNCATVK 115          
BLAST of EY753491 vs. ExPASy Swiss-Prot
Match: LTP1_MORNI (Non-specific lipid-transfer protein 1 OS=Morus nigra PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 7.688e-30
Identity = 61/92 (66.30%), Postives = 74/92 (80.43%), Query Frame = 1
Query:  142 ITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 417
            ITCGQV++SLAPCI +L  GG   P  CC+GVRSLN AA+TT DRQAACNCLK A+ +I+G+  N+AAGLP +CGV +PYKISPSTDC  V+
Sbjct:    1 ITCGQVSSSLAPCINYLRAGG-VVPANCCNGVRSLNNAAKTTADRQAACNCLKSAFNSIKGLNLNLAAGLPGKCGVSVPYKISPSTDCKSVK 91          
BLAST of EY753491 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUPE (Non-specific lipid-transfer protein 1 OS=Prunus persica PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.110e-28
Identity = 56/92 (60.87%), Postives = 73/92 (79.35%), Query Frame = 1
Query:  142 ITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 417
            ITCGQV+++LAPCIP+ + GG   PP CC+G+R++N  ARTTPDRQAACNCLK+   ++ G+ PN AA LP +CGV IPYKIS ST+C+ V+
Sbjct:    1 ITCGQVSSALAPCIPY-VRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVHIPYKISASTNCATVK 91          
BLAST of EY753491 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUAR (Non-specific lipid-transfer protein 1 OS=Prunus armeniaca PE=1 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 5.510e-28
Identity = 56/92 (60.87%), Postives = 72/92 (78.26%), Query Frame = 1
Query:  142 ITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 417
            ITCGQV++SLAPCI + + GG   PP CC+G+R++N  ARTTPDR+ ACNCLK+  G+I G+ PN AA LP +CGV IPYKIS ST+C+ V+
Sbjct:    1 ITCGQVSSSLAPCIGY-VRGGGAVPPACCNGIRNVNNLARTTPDRRTACNCLKQLSGSISGVNPNNAAALPGKCGVNIPYKISASTNCATVK 91          
BLAST of EY753491 vs. ExPASy Swiss-Prot
Match: NLTP_PYRCO (Non-specific lipid-transfer protein OS=Pyrus communis PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 7.196e-28
Identity = 54/96 (56.25%), Postives = 74/96 (77.08%), Query Frame = 1
Query:  130 VTNAITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 417
            V +AITC QV+A+LAPCI ++ +GG  PP  CC+G++++NG A+TTPDRQAACNCLK   G++ G+ P  A  LP +CGV +PYKIS ST+C+ V+
Sbjct:   21 VAHAITCSQVSANLAPCINYVRSGGAVPPA-CCNGIKTINGLAKTTPDRQAACNCLKNLAGSVSGVNPGNAESLPGKCGVNVPYKISTSTNCATVK 115          
BLAST of EY753491 vs. ExPASy Swiss-Prot
Match: NLTP_PRUAV (Non-specific lipid-transfer protein OS=Prunus avium PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 2.094e-27
Identity = 52/97 (53.61%), Postives = 73/97 (75.26%), Query Frame = 1
Query:  127 PVTNAITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 417
            P+  A+TCGQV+++LAPCI + + GG   PP CC+G+R++N  A+TT DRQ ACNCLK+   ++ G+  N AA LP +CGV +PYKISPST+C+ V+
Sbjct:   22 PIAQALTCGQVSSNLAPCIAY-VRGGGAVPPACCNGIRNINNLAKTTADRQTACNCLKQLSASVPGVNANNAAALPGKCGVNVPYKISPSTNCATVK 117          
BLAST of EY753491 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUDO (Non-specific lipid-transfer protein 1 OS=Prunus domestica PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 6.092e-27
Identity = 54/92 (58.70%), Postives = 72/92 (78.26%), Query Frame = 1
Query:  142 ITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 417
            ITCGQV+++LAPCI + + GG   PP CC+G+R++N  ARTT DR+AACNCLK+  G+I G+ PN AA LP +CGV +PYKIS ST+C+ V+
Sbjct:    1 ITCGQVSSNLAPCINY-VKGGGAVPPACCNGIRNVNNLARTTADRRAACNCLKQLSGSIPGVNPNNAAALPGKCGVNVPYKISASTNCATVK 91          
BLAST of EY753491 vs. ExPASy Swiss-Prot
Match: NLTP1_TOBAC (Non-specific lipid-transfer protein 1 OS=Nicotiana tabacum GN=LTP1 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.039e-26
Identity = 60/97 (61.86%), Postives = 69/97 (71.13%), Query Frame = 1
Query:  127 PVTNAITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 417
            P   AITCGQVT++LAPC+ +L   G  P   CC GV++L  +ARTT DRQ AC CLK A G I GI    AAGLPS CGV IPYKISPSTDCS+V+
Sbjct:   20 PCAEAITCGQVTSNLAPCLAYLRNTG--PLGRCCGGVKALVNSARTTEDRQIACTCLKSAAGAISGINLGKAAGLPSTCGVNIPYKISPSTDCSKVQ 114          
The following BLAST results are available for this feature:
BLAST of EY753491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
NLTP_HELAN1.830e-3164.95Non-specific lipid-transfer protein OS=Helianthus ... [more]
NLTP1_PRUDU6.954e-3159.79Non-specific lipid-transfer protein 1 OS=Prunus du... [more]
NLTP_MALDO2.023e-3062.50Non-specific lipid-transfer protein OS=Malus domes... [more]
LTP1_MORNI7.688e-3066.30Non-specific lipid-transfer protein 1 OS=Morus nig... [more]
NLTP1_PRUPE1.110e-2860.87Non-specific lipid-transfer protein 1 OS=Prunus pe... [more]
NLTP1_PRUAR5.510e-2860.87Non-specific lipid-transfer protein 1 OS=Prunus ar... [more]
NLTP_PYRCO7.196e-2856.25Non-specific lipid-transfer protein OS=Pyrus commu... [more]
NLTP_PRUAV2.094e-2753.61Non-specific lipid-transfer protein OS=Prunus aviu... [more]
NLTP1_PRUDO6.092e-2758.70Non-specific lipid-transfer protein 1 OS=Prunus do... [more]
NLTP1_TOBAC1.039e-2661.86Non-specific lipid-transfer protein 1 OS=Nicotiana... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-003-D11-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753491 ID=EY753491; Name=EY753491; organism=Citrus sinensis; type=EST; length=944bp
AATTCCAAATCCGACCCACGCGTCCGCTGATAACTAGTTATAACCAAGCA
AAAGCCTCCCTGACGAATCCTCATGGCTGCTCTTAAGCTTGTTTGTGCTT
TGCTTTTGTGCATTCTGGTGACTGCCCCGGTGACTAATGCCATAACATGC
GGGCAGGTGACAGCCTCCTTGGCTCCATGCATCCCTTTCTTGATAACTGG
AGGGCGTTTTCCTCCACCGCCATGCTGTAGCGGCGTCAGGTCTCTCAACG
GCGCCGCCAGAACCACCCCTGACCGCCAAGCTGCATGCAACTGCTTGAAA
CGAGCTTACGGAACAATCCGCGGCATCAAACCTAATGTTGCCGCTGGCCT
TCCTAGTCAATGTGGAGTCAGAATTCCTTACAAGATCAGCCCCAGCACCG
ACTGCTCTAGGGTCAGGTGAAGTTGAGTTTGAGCTCTGTGACTTTCCAAG
TATGATTGACTGAGAAGAATAAATAAATAAAGAATATCTATGTTAATTTC
TTTGTCCGAACGAGTCTCCACTTGTATGAGTTTCACTCTCATGTCATGTT
TGTATATTTGCTTTTTATGTCATATTAAATATGTAAACGCGATCTGTGTT
TTGAGTGATTAATTATAGTTATTTTGTGGTATTATCTTAAAAAAAAAAAA
AAAAAAAAAAAAAAGNGGGGGCCGGCCNCTCTTTTGTTTTCTTTTTTCCC
TTCCCTTGTCTGCTTTTTTTTNCTTTTTCTTTGCGGCCCCTCTTTTTTCT
TATGGCTCCTGCGTTACNCGTTTTTTTTGGGGAAACCTGGCGTTCCCCAA
TAAATGGCCTGGGGCACCCCCCTTTTCCCCGTTGGCTTTCTCCCGTTAGG
CCCCTTCTTTTTCCTTTCCTCCTTTGCCTTCCTGATGGCGCTGGGTCCCC
CCTTTGCGCTTTTTAACCTGGTGAGTGGTGTTTACCACACAAAA
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