EY753487
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY753487 vs. ExPASy Swiss-Prot
Match: PAB2_SCHPO (Polyadenylate-binding protein 2 OS=Schizosaccharomyces pombe GN=pab2 PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 6.924e-36 Identity = 89/164 (54.27%), Postives = 105/164 (64.02%), Query Frame = 2 Query: 164 KELDEMKKRLNDMEEEAAALGEMQAKVEKEMGAAQDPANVAANQASKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALQLNESELHGRQLKVLPKRTNVPGMKQYRPR-----RFNPYMGYRGRRPYVPPY 637 KEL EMK+R+ +ME EAA L MQ +++ E A ++ KE D++SV+VGNVDY+ TPEE+Q HF SCG+VNRVTIL DKF G PKGFAY+EF E V AL LN S LH R LKV PKRTNVPGM + R R R GYRGR PY Sbjct: 12 KELLEMKERVAEMEAEAAKLRAMQEQLDNETEALRN---------DKESIDAQSVYVGNVDYSVTPEELQSHFASCGSVNRVTILCDKFTGHPKGFAYIEFSEPSLVPNALLLNGSMLHERPLKVTPKRTNVPGMSRGRGRGRGRGRGRGRGGYRGRARGFAPY 166
BLAST of EY753487 vs. ExPASy Swiss-Prot
Match: PAB2A_XENLA (Polyadenylate-binding protein 2-A OS=Xenopus laevis GN=pabpn1-A PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 6.924e-36 Identity = 96/241 (39.83%), Postives = 131/241 (54.36%), Query Frame = 2 Query: 26 TRPGIHXRENGGRRAEVYGGE--IPDVEGDMDAHNTDVDMSXXXXXXVKELDEMKKRLNDMEEEAAALGEMQAKVEKEMGAAQDPAN---VAANQASKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALQLNESELHGRQLKVLPKRTNVPGMK---------QYRPRRFNPYMGYRGRRPYVPPYFYSPYGYGKVSRFXRPMRYMPY 703 T PG R +GGR GG + ++E + +++ EL+ +K R+ +MEEEA L E+Q +VEK+M + P N V + K EAD+RS++VGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF + ++V+ +L L+ES GRQ+KV+PKRTN PG+ +YR R Y R + Y P G R Y PY Sbjct: 63 TTPG---RRSGGRGGSGGGGAGGLEELEDEELEEEEPGELTGDQTIEDPELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSVEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFCDKESVRTSLALDESLFRGRQIKVVPKRTNRPGISTTDRGFPRARYRARA----SSYSSRSRFYSGYTPRPRGRVYRGRARATSWYTPY 296
BLAST of EY753487 vs. ExPASy Swiss-Prot
Match: PAB2B_XENLA (Polyadenylate-binding protein 2-B OS=Xenopus laevis GN=pabpn1-B PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 9.043e-36 Identity = 96/240 (40.00%), Postives = 131/240 (54.58%), Query Frame = 2 Query: 26 TRPGIHXRENGGRRAEVYG-GEIPDVEGDMDAHNTDVDMSXXXXXXVKELDEMKKRLNDMEEEAAALGEMQAKVEKEMGAAQDPAN---VAANQASKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALQLNESELHGRQLKVLPKRTNVPGMK---------QYRPRRFNPYMGYRGRRPYVPPYFYSPYGYGKVSRFXRPMRYMPY 703 T PG R +GGR G G + ++E + +++ EL+ +K R+ +MEEEA L E+Q +VEK+M + P N V + K EAD+RS++VGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF + ++V+ +L L+ES GRQ+KV+PKRTN PG+ +YR R Y R + Y P G R Y PY Sbjct: 63 TAPG---RRSGGRGGSGGGAGGLEELEDEELEEEEPGELTGDQTIEDPELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSVEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVVPKRTNRPGISTTDRGFPRARYRARA----SSYSSRSRFYSGYTPRPRGRVYRGRARATSWYTPY 295
BLAST of EY753487 vs. ExPASy Swiss-Prot
Match: PABP2_XENTR (Polyadenylate-binding protein 2 OS=Xenopus tropicalis GN=pabpn1 PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 4.488e-35 Identity = 95/241 (39.42%), Postives = 131/241 (54.36%), Query Frame = 2 Query: 26 TRPGIHXRENGGRRAEVYGGE--IPDVEGDMDAHNTDVDMSXXXXXXVKELDEMKKRLNDMEEEAAALGEMQAKVEKEMGAAQDPAN---VAANQASKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALQLNESELHGRQLKVLPKRTNVPGMK---------QYRPRRFNPYMGYRGRRPYVPPYFYSPYGYGKVSRFXRPMRYMPY 703 T PG R +GGR GG + ++E + +++ EL+ +K R+ +MEEEA L E+Q +VEK+M + P N V + K EAD+RS++VGNVDY T EE++ HF CG+VNRVTIL DK+ G PKGFAY+EF + ++V+ +L L+ES GRQ+KV+PKRTN PG+ +YR R Y R + Y P G R Y PY Sbjct: 63 TAPG---RRSGGRGGSGGGGAGGLEELEDEELEEEEPGELTGDQTIEDPELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVVPKRTNRPGISTTDRGFPRARYRARA----SSYSSRSRFYSGYTPRPRGRVYRGRARVTSWYTPY 296
BLAST of EY753487 vs. ExPASy Swiss-Prot
Match: PABP2_MOUSE (Polyadenylate-binding protein 2 OS=Mus musculus GN=Pabpn1 PE=2 SV=3) HSP 1 Score: 146.747 bits (369), Expect = 1.705e-34 Identity = 86/185 (46.49%), Postives = 113/185 (61.08%), Query Frame = 2 Query: 167 ELDEMKKRLNDMEEEAAALGEMQAKVEKEMGAAQDPAN---VAANQASKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALQLNESELHGRQLKVLPKRTNVPGM---------KQYRPRRFNPYMGYRGRRPYVPPYFYSPYGYGKVSRFXR 682 EL+ +K R+ +MEEEA L E+Q +VEK+M + P N V + K EAD+RS++VGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF + ++V+ +L L+ES GRQ+KV+PKRTN PG+ +YR R N Y R R FYS + R R Sbjct: 114 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRSRYRARTTN-YNSSRSR-------FYSGFNSRPRGRIYR 290
BLAST of EY753487 vs. ExPASy Swiss-Prot
Match: PABP2_HUMAN (Polyadenylate-binding protein 2 OS=Homo sapiens GN=PABPN1 PE=1 SV=3) HSP 1 Score: 145.976 bits (367), Expect = 2.909e-34 Identity = 79/154 (51.30%), Postives = 104/154 (67.53%), Query Frame = 2 Query: 167 ELDEMKKRLNDMEEEAAALGEMQAKVEKEMGAAQDPAN---VAANQASKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALQLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPYMGYRGR 616 EL+ +K R+ +MEEEA L E+Q +VEK+M + P N V + K EAD+RS++VGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF + ++V+ +L L+ES GRQ+KV+PKRTN PG+ R P YR R Sbjct: 118 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVIPKRTNRPGIS--TTDRGFPRARYRAR 269
BLAST of EY753487 vs. ExPASy Swiss-Prot
Match: PABP2_BOVIN (Polyadenylate-binding protein 2 OS=Bos taurus GN=PABPN1 PE=1 SV=3) HSP 1 Score: 145.976 bits (367), Expect = 2.909e-34 Identity = 79/154 (51.30%), Postives = 104/154 (67.53%), Query Frame = 2 Query: 167 ELDEMKKRLNDMEEEAAALGEMQAKVEKEMGAAQDPAN---VAANQASKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALQLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPYMGYRGR 616 EL+ +K R+ +MEEEA L E+Q +VEK+M + P N V + K EAD+RS++VGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF + ++V+ +L L+ES GRQ+KV+PKRTN PG+ R P YR R Sbjct: 118 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVIPKRTNRPGIS--TTDRGFPRARYRAR 269
BLAST of EY753487 vs. ExPASy Swiss-Prot
Match: PABP2_DROME (Polyadenylate-binding protein 2 OS=Drosophila melanogaster GN=Pabp2 PE=1 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 7.922e-32 Identity = 78/182 (42.86%), Postives = 106/182 (58.24%), Query Frame = 2 Query: 167 ELDEMKKRLNDMEEEAAALGEMQAKVEKEM--GAAQDPANVAANQASKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALQLNESELHGRQLKVLPKRTNVPGMKQYRP----------------------RRFNPYMGYRGRRPYVPPY 637 EL+ +K R+ +MEEEA + +MQ++V+K+M G+ A V + K+E D+RSV+VGNVDY + EE++ HF CGT+NRVTIL +K G PKGFAY+EF + V+ AL +NE+ GRQ+KV+ KRTN PG+ R MGYRGR Y PY Sbjct: 43 ELEAIKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLATVPLSLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRGRQIKVMSKRTNRPGLSTTNRFARGSFRGRGARVSRACCHSTFRGARRAMGYRGRANYYAPY 224
BLAST of EY753487 vs. ExPASy Swiss-Prot
Match: PABP2_DROPS (Polyadenylate-binding protein 2 OS=Drosophila pseudoobscura pseudoobscura GN=Pabp2 PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 5.135e-31 Identity = 78/183 (42.62%), Postives = 107/183 (58.47%), Query Frame = 2 Query: 167 ELDEMKKRLNDMEEEAAALGEMQAKVEKEM--GAAQDPANVAANQASKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALQLNESELHGRQLKVLPKRTNVPGMK--------QYRPR---------------RFNPYMGYRGRRPYVPPY 637 EL+ +K R+ +MEEEA + +MQ++V+K+M G+ A V + K+E D+RSV+VGNVDY + EE++ HF CGT+NRVTIL +K G PKGFAY+EF + V+ AL +NE+ GRQ+KV+ KRTN PG+ +R R GYRGR Y PY Sbjct: 43 ELEAIKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLAAVPLSLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRGRQIKVMSKRTNRPGLSTTNRFARGSFRGRGARASRACCHSTFRGARRAIRGYRGRANYYAPY 225
BLAST of EY753487 vs. ExPASy Swiss-Prot
Match: PABP2_DICDI (Polyadenylate-binding protein 2 OS=Dictyostelium discoideum GN=pabpn1 PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.398e-28 Identity = 80/199 (40.20%), Postives = 113/199 (56.78%), Query Frame = 2 Query: 53 NGGRRAEVYGGEIPDVEGDMDAHNTDVDMSXXXXXXVKELDEMKKRLNDMEEEAAALGEMQAKVEKEMGAAQDPANVAAN--------QASKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFLEIDAVQEALQLNESELHGRQLKVLPKRTNVP-GMKQ-YRPRRFNPYMGYRGR 616 N G E E E +++ H ++ + + EL+EMKKR +MEEEA L E+Q +E + + + N +EE DSRSV+VGNVDY T +++ +FQSCGTVNR+TIL+DK G PKG YVEF+ +++ A+ LN+S + RQLK+ PKRTN+P M+Q P + G RGR Sbjct: 5 NNGEIVEDKDNEKLKGEDNINNHISNHNNTEETSFEDPELEEMKKRFREMEEEAKKLTELQNNLESNI-TGNNGVGIGGNIGGGGGLMNTDQEEIDSRSVYVGNVDYKSTHDQILAYFQSCGTVNRITILSDKTTGHPKGCCYVEFVNKESIINAMALNDSFFNERQLKITPKRTNLPYYMRQGVLPPGRGGFRGGRGR 202 The following BLAST results are available for this feature:
BLAST of EY753487 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >EY753487 ID=EY753487; Name=EY753487; organism=Citrus sinensis; type=EST; length=924bpback to top |