EY753427

Overview
NameEY753427
Unique NameEY753427
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length491
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753427 vs. ExPASy Swiss-Prot
Match: EF1B_ORYSJ (Elongation factor 1-beta OS=Oryza sativa subsp. japonica GN=Os07g0662500 PE=1 SV=3)

HSP 1 Score: 78.9518 bits (193), Expect = 1.313e-14
Identity = 38/45 (84.44%), Postives = 41/45 (91.11%), Query Frame = 3
Query:    3 INMLQIMITIVDDLVSVDSLIEEHLTAEPCNEYIQSCDIVAFNKI 137
            I  LQIM+TIVDDLVSVDSLIEEHLT EP NE++QSCDIVAFNKI
Sbjct:  180 IKKLQIMLTIVDDLVSVDSLIEEHLTEEPINEFVQSCDIVAFNKI 224          
BLAST of EY753427 vs. ExPASy Swiss-Prot
Match: EF1D_PIMBR (Elongation factor 1-delta OS=Pimpinella brachycarpa PE=2 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 2.924e-14
Identity = 37/45 (82.22%), Postives = 41/45 (91.11%), Query Frame = 3
Query:    3 INMLQIMITIVDDLVSVDSLIEEHLTAEPCNEYIQSCDIVAFNKI 137
            I  LQIM+TIVDDLVSVD L+E++LTAEP NEYIQSCDIVAFNKI
Sbjct:  182 IKKLQIMLTIVDDLVSVDDLVEDYLTAEPANEYIQSCDIVAFNKI 226          
BLAST of EY753427 vs. ExPASy Swiss-Prot
Match: EF1D_BETVU (Elongation factor 1-delta OS=Beta vulgaris PE=2 SV=3)

HSP 1 Score: 73.559 bits (179), Expect = 5.515e-13
Identity = 35/45 (77.78%), Postives = 40/45 (88.89%), Query Frame = 3
Query:    3 INMLQIMITIVDDLVSVDSLIEEHLTAEPCNEYIQSCDIVAFNKI 137
            I  L IM+TIVDDLVSVD+LIE++LT EP NEY+QSCDIVAFNKI
Sbjct:  187 IKKLTIMMTIVDDLVSVDNLIEDYLTVEPINEYVQSCDIVAFNKI 231          
BLAST of EY753427 vs. ExPASy Swiss-Prot
Match: EF1D1_ORYSJ (Elongation factor 1-delta 1 OS=Oryza sativa subsp. japonica GN=Os07g0614500 PE=2 SV=3)

HSP 1 Score: 73.559 bits (179), Expect = 5.515e-13
Identity = 36/45 (80.00%), Postives = 39/45 (86.67%), Query Frame = 3
Query:    3 INMLQIMITIVDDLVSVDSLIEEHLTAEPCNEYIQSCDIVAFNKI 137
            I  LQIM+TIVDDLVSVDSLIE++   EP NEYIQSCDIVAFNKI
Sbjct:  185 IKKLQIMMTIVDDLVSVDSLIEDYFYTEPANEYIQSCDIVAFNKI 229          
BLAST of EY753427 vs. ExPASy Swiss-Prot
Match: EF1D1_ARATH (Elongation factor 1-delta 1 OS=Arabidopsis thaliana GN=At1g30230 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 7.203e-13
Identity = 34/45 (75.56%), Postives = 39/45 (86.67%), Query Frame = 3
Query:    3 INMLQIMITIVDDLVSVDSLIEEHLTAEPCNEYIQSCDIVAFNKI 137
            I  LQI+ TIVDDLVS+D++IEE LT EP NEY+QSCDIVAFNKI
Sbjct:  187 IKKLQILCTIVDDLVSIDTMIEEQLTVEPINEYVQSCDIVAFNKI 231          
BLAST of EY753427 vs. ExPASy Swiss-Prot
Match: EF1D2_ARATH (Elongation factor 1-delta 2 OS=Arabidopsis thaliana GN=At2g18110 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.229e-12
Identity = 34/45 (75.56%), Postives = 38/45 (84.44%), Query Frame = 3
Query:    3 INMLQIMITIVDDLVSVDSLIEEHLTAEPCNEYIQSCDIVAFNKI 137
            I  L IM TIVDDLVS+D++IEE LT EP NEY+QSCDIVAFNKI
Sbjct:  187 IKKLHIMCTIVDDLVSIDTMIEEQLTVEPINEYVQSCDIVAFNKI 231          
BLAST of EY753427 vs. ExPASy Swiss-Prot
Match: EF1D2_ORYSJ (Elongation factor 1-delta 2 OS=Oryza sativa subsp. japonica GN=Os03g0406200 PE=2 SV=3)

HSP 1 Score: 72.0182 bits (175), Expect = 1.605e-12
Identity = 35/45 (77.78%), Postives = 39/45 (86.67%), Query Frame = 3
Query:    3 INMLQIMITIVDDLVSVDSLIEEHLTAEPCNEYIQSCDIVAFNKI 137
            I  LQIM+TIVDDLVSVDSLIE++   EP NE+IQSCDIVAFNKI
Sbjct:  182 IKKLQIMMTIVDDLVSVDSLIEDYFYTEPANEFIQSCDIVAFNKI 226          
BLAST of EY753427 vs. ExPASy Swiss-Prot
Match: EF1B1_ARATH (Elongation factor 1-beta 1 OS=Arabidopsis thaliana GN=At5g12110 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 1.605e-12
Identity = 36/45 (80.00%), Postives = 40/45 (88.89%), Query Frame = 3
Query:    3 INMLQIMITIVDDLVSVDSLIEEHLTAEPCNEYIQSCDIVAFNKI 137
            I  L IM+TIVDDLVSVD+LIE+HLT+EP NEYIQS DIVAFNKI
Sbjct:  184 IKKLTIMMTIVDDLVSVDNLIEDHLTSEPNNEYIQSVDIVAFNKI 228          
BLAST of EY753427 vs. ExPASy Swiss-Prot
Match: EF1B2_ARATH (Elongation factor 1-beta 2 OS=Arabidopsis thaliana GN=At5g19510 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 7.964e-12
Identity = 35/45 (77.78%), Postives = 38/45 (84.44%), Query Frame = 3
Query:    3 INMLQIMITIVDDLVSVDSLIEEHLTAEPCNEYIQSCDIVAFNKI 137
            I  L IM TIVDDLVS D+LIE+ LT+EP NEYIQSCDIVAFNKI
Sbjct:  180 IKKLTIMFTIVDDLVSPDNLIEDFLTSEPNNEYIQSCDIVAFNKI 224          
The following BLAST results are available for this feature:
BLAST of EY753427 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
EF1B_ORYSJ1.313e-1484.44Elongation factor 1-beta OS=Oryza sativa subsp. ja... [more]
EF1D_PIMBR2.924e-1482.22Elongation factor 1-delta OS=Pimpinella brachycarp... [more]
EF1D_BETVU5.515e-1377.78Elongation factor 1-delta OS=Beta vulgaris PE=2 SV... [more]
EF1D1_ORYSJ5.515e-1380.00Elongation factor 1-delta 1 OS=Oryza sativa subsp.... [more]
EF1D1_ARATH7.203e-1375.56Elongation factor 1-delta 1 OS=Arabidopsis thalian... [more]
EF1D2_ARATH1.229e-1275.56Elongation factor 1-delta 2 OS=Arabidopsis thalian... [more]
EF1D2_ORYSJ1.605e-1277.78Elongation factor 1-delta 2 OS=Oryza sativa subsp.... [more]
EF1B1_ARATH1.605e-1280.00Elongation factor 1-beta 1 OS=Arabidopsis thaliana... [more]
EF1B2_ARATH7.964e-1277.78Elongation factor 1-beta 2 OS=Arabidopsis thaliana... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-002-F07-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753427 ID=EY753427; Name=EY753427; organism=Citrus sinensis; type=EST; length=491bp
GGATTAATATGCTGCAAATCATGATTACAATCGTTGACGATCTTGTTTCT
GTGGATTCACTGATAGAGGAACACCTCACAGCTGAGCCCTGCAATGAGTA
TATTCAGAGCTGCGACATCGTCGCCTTCAATAAAATTTAAGAATCCTCTC
ATTGTTTTGCCTTATAGTGCAGCCATTTTTGGCTGCAATTTAGTTTTTGT
CGTTTTAATTGTGTTCTGCTTTTTAATGGTTTTGCTTGGCCTGCATTTTC
CGTTGCTAAATTGAGAAGAAATGACGAGATGATCTTTCAAATTTCCTTGA
TATACTTCTTTATATTATCCATTGCCTCACTAATATCATAGAAGACTCTG
ATGATGTATACCAAATATGGAGGGTGTGTTTTAAAATTTTAATGCACATG
AAGAATGGGATGTAATATTGTTTTGTAACGTGCCTATTTATATGATGGTA
CACTATTGCCCTCANAAAAAAAAAAAAANAAAAAAANAAAA
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