FK826671
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FK826671 vs. ExPASy Swiss-Prot
Match: CB4C_ARATH (Chlorophyll a-b binding protein CP29.3, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.3 PE=1 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 7.932e-29 Identity = 58/73 (79.45%), Postives = 68/73 (93.15%), Query Frame = 3 Query: 3 IEYQRNAELDPVKRLYPGGYVDPLGLASDPGKLENLQLAEIKHARLAMVAFLIFGIQAAFTGKGPISFVATFN 221 IE+QRN+ELDP KR+YPGGY DPLGLA+DP KL+ L+LAEIKH+RLAMVAFLIF +QAAFTGKGP+SF+ATFN Sbjct: 203 IEFQRNSELDPEKRIYPGGYFDPLGLAADPEKLDTLKLAEIKHSRLAMVAFLIFALQAAFTGKGPVSFLATFN 275
BLAST of FK826671 vs. ExPASy Swiss-Prot
Match: CB4A_ARATH (Chlorophyll a-b binding protein CP29.1, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.1 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.602e-21 Identity = 54/78 (69.23%), Postives = 61/78 (78.21%), Query Frame = 3 Query: 3 IEYQRNAELDPVKRLYPGG-YVDPLGLASDPGKLENLQLAEIKHARLAMVAFLIFGIQAAFTGKGPISFVATFNQ*PI 233 IE+QRNAELD KRLYPGG + DPLGLA+DP K LQLAEIKHARLAMVAFL F +QAA TGKGP++ AT P+ Sbjct: 202 IEFQRNAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPL 279
BLAST of FK826671 vs. ExPASy Swiss-Prot
Match: CB4B_ARATH (Chlorophyll a-b binding protein CP29.2, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.2 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 3.569e-21 Identity = 54/78 (69.23%), Postives = 60/78 (76.92%), Query Frame = 3 Query: 3 IEYQRNAELDPVKRLYPGG-YVDPLGLASDPGKLENLQLAEIKHARLAMVAFLIFGIQAAFTGKGPISFVATFNQ*PI 233 IE+QRNAELD KRLYPGG + DPLGLASDP K LQLAEIKHARLAMV FL F +QAA TGKGP++ AT P+ Sbjct: 199 IEFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPL 276
BLAST of FK826671 vs. ExPASy Swiss-Prot
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.413e-14 Identity = 38/71 (53.52%), Postives = 49/71 (69.01%), Query Frame = 3 Query: 6 EYQRNAELDPVKRLYPGGYVDPLGLASDPGKLENLQLAEIKHARLAMVAFLIFGI-QAAFTGKGPISFVAT 215 E QR E DP K+ YPGG DPLG + DP K E L+L EIK+ RLAM+AF+ F + Q+A+ G GP+ +AT Sbjct: 153 EQQRTMEKDPEKKKYPGGAFDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLAT 223
BLAST of FK826671 vs. ExPASy Swiss-Prot
Match: CB29_CHLRE (Chlorophyll a-b binding protein CP29 OS=Chlamydomonas reinhardtii GN=Lhcb4 PE=1 SV=3) HSP 1 Score: 74.7146 bits (182), Expect = 1.606e-13 Identity = 39/72 (54.17%), Postives = 50/72 (69.44%), Query Frame = 3 Query: 6 EYQRNAELDPVKRLYPGGYVDPLGLAS-DPGKLENLQLAEIKHARLAMVAFLIFGIQAAFTGKGPISFVATF 218 E+ RN+E +P KR YPGG DPL LAS D + L+ AEIKHARLAMV+F +G+QA TG+G + +A F Sbjct: 199 EFYRNSETNPEKRCYPGGVFDPLKLASEDEERAFRLKTAEIKHARLAMVSFFGYGVQALSTGEGALGSLAKF 270
BLAST of FK826671 vs. ExPASy Swiss-Prot
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.955e-12 Identity = 34/72 (47.22%), Postives = 50/72 (69.44%), Query Frame = 3 Query: 3 IEYQRNAELDPVKRLYPGGYVDPLGLASDPGKLENLQLAEIKHARLAMVAFLIFGI-QAAFTGKGPISFVAT 215 +E+QR+ E D K+ YPGG DPLG + DP K E L++ EIK+ RLA++A + F + Q+A+ G GP+ +AT Sbjct: 153 VEHQRSMEKDSEKKKYPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLGTGPLENLAT 224 The following BLAST results are available for this feature:
BLAST of FK826671 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FK826671 ID=FK826671; Name=FK826671; organism=Citrus sinensis; type=EST; length=339bpback to top |