FE660222
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FE660222 vs. ExPASy Swiss-Prot
Match: ALIS4_ARATH (Putative ALA-interacting subunit 4 OS=Arabidopsis thaliana GN=ALIS4 PE=2 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 1.333e-61 Identity = 110/158 (69.62%), Postives = 127/158 (80.38%), Query Frame = 3 Query: 3 YQLDNFYQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLDESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVILENNYNT 476 YQL+N+YQNHRRYVKSR D QL+ ET C PEDT G+PIVPCGL+AWSLFNDTY F+RN ++L VNK I+WKSDR+ KFGK VFP NFQ G+LIGG LD+ IPLS+QEDLIVWMRTAALPTFRKLYGKI+ DL+ D I V+L+NNYNT Sbjct: 128 YQLENYYQNHRRYVKSRQDGQLRSPKDEHETKSCAPEDTL-GGQPIVPCGLVAWSLFNDTYDFTRNNQKLPVNKKDISWKSDRESKFGKNVFPKNFQKGSLIGGKSLDQDIPLSEQEDLIVWMRTAALPTFRKLYGKIDTDLQAGDTIKVLLQNNYNT 284
BLAST of FE660222 vs. ExPASy Swiss-Prot
Match: ALIS5_ARATH (ALA-interacting subunit 5 OS=Arabidopsis thaliana GN=ALIS5 PE=1 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 2.969e-61 Identity = 111/158 (70.25%), Postives = 126/158 (79.75%), Query Frame = 3 Query: 3 YQLDNFYQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLDESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVILENNYNT 476 YQL+NFYQNHRRYVKSRND QL+ + + C PED G+PIVPCGL+AWSLFNDTY+FSRN +QL VNK GI+WKSDR++KFGK VFP NFQ G IGG L+ S PLS+QEDLIVWMRTAALPTFRKLYGKIE DL D I V+L+NNYNT Sbjct: 125 YQLENFYQNHRRYVKSRNDAQLRSPKEEHDVKTCAPEDNV-GGEPIVPCGLVAWSLFNDTYSFSRNSQQLLVNKKGISWKSDRENKFGKNVFPKNFQKGAPIGGGTLNISKPLSEQEDLIVWMRTAALPTFRKLYGKIETDLHAGDTITVLLQNNYNT 281
BLAST of FE660222 vs. ExPASy Swiss-Prot
Match: ALIS1_ARATH (ALA-interacting subunit 1 OS=Arabidopsis thaliana GN=ALIS1 PE=1 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 3.877e-61 Identity = 112/158 (70.89%), Postives = 126/158 (79.75%), Query Frame = 3 Query: 3 YQLDNFYQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLDESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVILENNYNT 476 YQL+NFYQNHRRYVKSR+D QL+ ++ C+PED G+PIVPCGLIAWSLFNDTY SRN + LTVNK GIAWKSD++HKFGK VFP NFQ G L GGA LD + PLS QEDLIVWMRTAALPTFRKLYGKIE DLE+ + I V L+NNYNT Sbjct: 126 YQLENFYQNHRRYVKSRSDSQLRSVKDENQIDACKPEDDF-GGQPIVPCGLIAWSLFNDTYVLSRNNQGLTVNKKGIAWKSDKEHKFGKNVFPKNFQKGNLTGGASLDPNKPLSDQEDLIVWMRTAALPTFRKLYGKIESDLEKGENIQVTLQNNYNT 282
BLAST of FE660222 vs. ExPASy Swiss-Prot
Match: ALIS3_ARATH (ALA-interacting subunit 3 OS=Arabidopsis thaliana GN=ALIS3 PE=1 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 6.614e-61 Identity = 112/158 (70.89%), Postives = 124/158 (78.48%), Query Frame = 3 Query: 3 YQLDNFYQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLDESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVILENNYNT 476 YQL+NFYQNHRRYVKSR+D QL+ ++ S C+PED G+PIVPCGLIAWSLFNDTY SRN L VNK GIAWKSD++HKFG +VFP NFQ G + GGA LD IPLS+QEDLIVWMRTAALPTFRKLYGKIE DLE D I V L NNYNT Sbjct: 125 YQLENFYQNHRRYVKSRSDSQLRSTKYENQISACKPEDDV-GGQPIVPCGLIAWSLFNDTYALSRNNVSLAVNKKGIAWKSDKEHKFGNKVFPKNFQKGNITGGATLDPRIPLSEQEDLIVWMRTAALPTFRKLYGKIESDLEMGDTIHVKLNNNYNT 281
BLAST of FE660222 vs. ExPASy Swiss-Prot
Match: ALIS2_ARATH (Putative ALA-interacting subunit 2 OS=Arabidopsis thaliana GN=ALIS2 PE=2 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 2.513e-60 Identity = 109/158 (68.99%), Postives = 130/158 (82.28%), Query Frame = 3 Query: 3 YQLDNFYQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLDESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVILENNYNT 476 YQLDN+YQNHRRYVKSR+D+QL + S TS CEPE+++ +G PIVPCGLIAWS+FNDT+TFSR + +L V++N IAWKSDR+HKFGK V+P NFQNGTLIGGA LD IPLS QED IVWMR AAL +FRKLYG+IE DLE +++V L NNYNT Sbjct: 122 YQLDNYYQNHRRYVKSRSDQQLLHGLEYSHTSSCEPEESS-NGLPIVPCGLIAWSMFNDTFTFSRERTKLNVSRNNIAWKSDREHKFGKNVYPINFQNGTLIGGAKLDPKIPLSDQEDFIVWMRAAALLSFRKLYGRIEEDLEPGKVVEVNLMNNYNT 278
BLAST of FE660222 vs. ExPASy Swiss-Prot
Match: CC50A_CHICK (Cell cycle control protein 50A OS=Gallus gallus GN=TMEM30A PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 6.466e-24 Identity = 74/156 (47.44%), Postives = 89/156 (57.05%), Query Frame = 3 Query: 3 YQLDNFYQNHRRYVKSRNDEQLK--KRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDT---YTFSRNKRQ-LTVNKNGIAWKSDRDHKFGKEVFPSN----FQNGTLIGG----AHLDESIPLSK---QEDLIVWMRTAALPTFRKLYGKIE 419 Y L NFYQNHRRYVKSR+D QL S + + +CEP T D KPI PCG IA S+FNDT Y + R +T+ K GIAW +D++ KF N FQ T ++ +S P + ED IVWMRTAALPTFRKLY IE Sbjct: 134 YGLSNFYQNHRRYVKSRDDSQLNGDNSSLLNPSKECEPYRTNED-KPIAPCGAIANSMFNDTLELYHIENDTRTAITLIKKGIAWWTDKNVKFRNPKGDGNLTALFQGTTKPVNWPKPVYMLDSEPDNNGFINEDFIVWMRTAALPTFRKLYRLIE 288
BLAST of FE660222 vs. ExPASy Swiss-Prot
Match: CC50A_RAT (Cell cycle control protein 50A OS=Rattus norvegicus GN=Tmem30a PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 2.457e-23 Identity = 71/160 (44.38%), Postives = 86/160 (53.75%), Query Frame = 3 Query: 3 YQLDNFYQNHRRYVKSRNDEQLK--KRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQ-------LTVNKNGIAWKSDRDHKF----GKEVFPSNFQNGTLIGGAHL--------DESIPLSKQEDLIVWMRTAALPTFRKLYGKIE 419 Y L NFYQNHRRYVKSR+D QL + + + +CEP D KPI PCG IA S+FNDT + + + K GIAW +D++ KF GK+ F++ T H DES ED IVWMRTAALPTFRKLY IE Sbjct: 86 YGLSNFYQNHRRYVKSRDDSQLNGDPSALLNPSKECEPYRRNED-KPIAPCGAIANSMFNDTLELFLVANESDPKPVPILLKKKGIAWWTDKNVKFRNPPGKDSLQEKFKDTTKPVNWHKPVYELDPDDESNNGFINEDFIVWMRTAALPTFRKLYRLIE 244
BLAST of FE660222 vs. ExPASy Swiss-Prot
Match: CC50A_PONAB (Cell cycle control protein 50A OS=Pongo abelii GN=TMEM30A PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 7.148e-23 Identity = 69/157 (43.95%), Postives = 85/157 (54.14%), Query Frame = 3 Query: 3 YQLDNFYQNHRRYVKSRNDEQLKKRSKT--SETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTF-----SRNKRQLTVNKNGIAWKSDRDHKFG--------KEVFPSNFQNGTLIGGAHLDESIPLSK---QEDLIVWMRTAALPTFRKLYGKIE 419 Y L NFYQNHRRYVKSR+D QL S + + +CEP D KPI PCG IA S+FNDT + + K GIAW +D++ KF KE F + + ++ +S P + ED IVWMRTAALPTFRKLY IE Sbjct: 122 YGLSNFYQNHRRYVKSRDDSQLNGDSSALLNPSKECEPYRRNED-KPIAPCGAIANSMFNDTLELFLIGNDSYPIPIALKKKGIAWWTDKNVKFRNPPGGDNLKERFKGTTKPVNWLKPVYMLDSDPDNNGFINEDFIVWMRTAALPTFRKLYRLIE 277
BLAST of FE660222 vs. ExPASy Swiss-Prot
Match: CC50A_MOUSE (Cell cycle control protein 50A OS=Mus musculus GN=Tmem30a PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.219e-22 Identity = 70/160 (43.75%), Postives = 85/160 (53.12%), Query Frame = 3 Query: 3 YQLDNFYQNHRRYVKSRNDEQLK--KRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQ-------LTVNKNGIAWKSDRDHKF----GKEVFPSNFQNGTLIGGAHL--------DESIPLSKQEDLIVWMRTAALPTFRKLYGKIE 419 Y L NFYQNHRRYVKSR+D QL + + + +CEP D +PI PCG IA S+FNDT + + + K GIAW +D++ KF GKE F++ H DES ED IVWMRTAALPTFRKLY IE Sbjct: 122 YGLSNFYQNHRRYVKSRDDSQLNGDPSALLNPSKECEPYRRNED-RPIAPCGAIANSMFNDTLELYLVANESDPKPIPIPLKKKGIAWWTDKNVKFRNPPGKESLEEKFKDTIKPVNWHKAVYELDPEDESNNGFINEDFIVWMRTAALPTFRKLYRLIE 280
BLAST of FE660222 vs. ExPASy Swiss-Prot
Match: CC50A_HUMAN (Cell cycle control protein 50A OS=Homo sapiens GN=TMEM30A PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.593e-22 Identity = 69/157 (43.95%), Postives = 86/157 (54.78%), Query Frame = 3 Query: 3 YQLDNFYQNHRRYVKSRNDEQLKKRSKT--SETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTF-----SRNKRQLTVNKNGIAWKSDRDHKF----GKEVFPSNFQNGTL----IGGAHLDESIPLSK---QEDLIVWMRTAALPTFRKLYGKIE 419 Y L NFYQNHRRYVKSR+D QL S + + +CEP D KPI PCG IA S+FNDT + + K GIAW +D++ KF G + F+ T + ++ +S P + ED IVWMRTAALPTFRKLY IE Sbjct: 122 YGLSNFYQNHRRYVKSRDDSQLNGDSSALLNPSKECEPYRRNED-KPIAPCGAIANSMFNDTLELFLIGNDSYPIPIALKKKGIAWWTDKNVKFRNPPGGDNLEERFKGTTKPVNWLKPVYMLDSDPDNNGFINEDFIVWMRTAALPTFRKLYRLIE 277 The following BLAST results are available for this feature:
BLAST of FE660222 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >FE660222 ID=FE660222; Name=FE660222; organism=Citrus sinensis; type=EST; length=476bpback to top |