EY720221
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY720221 vs. ExPASy Swiss-Prot
Match: PSMD2_RAT (26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus GN=Psmd2 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 7.436e-40 Identity = 85/220 (38.64%), Postives = 131/220 (59.55%), Query Frame = 2 Query: 44 DEASIDDLMELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLYLTSAAKYLPGPDDMLVLDIAYMIYLRFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKKQFCDILARHGITLELXXXXXXXXXXRYALQDLVNNVKLSEGYLTLARDIEVMEPKSPEDLYNAHLLDGR-ASAGASVDSPRQNLAATLVNAFVNARFGHDKFMT 700 ++A + L+ LV+EIV ++M HNAE + + CLYLTS Y+P P++ +L A ++ +F FP AL++AL L++M+ V+ IFTSC D++ +KQ +L RHG+ LEL L ++++NV+L+ +L LAR++++MEPK P+D+Y HL + R +G+ VDS R NLA++ VN FVNA FG DK +T Sbjct: 177 EKAQREPLLTLVKEIVPYNMAHNAEHEACDLLMEIEQVDMLEKDIDENAYSKVCLYLTSCVNYVPEPENSALLRCALGVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQKQMAFMLGRHGVFLELSEDVEEYED----LTEIMSNVQLNSNFLALARELDIMEPKVPDDIYKTHLENNRFGGSGSQVDSARMNLASSFVNGFVNAAFGQDKLLT 392
BLAST of EY720221 vs. ExPASy Swiss-Prot
Match: PSMD2_MOUSE (26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus GN=Psmd2 PE=1 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 9.712e-40 Identity = 85/220 (38.64%), Postives = 131/220 (59.55%), Query Frame = 2 Query: 44 DEASIDDLMELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLYLTSAAKYLPGPDDMLVLDIAYMIYLRFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKKQFCDILARHGITLELXXXXXXXXXXRYALQDLVNNVKLSEGYLTLARDIEVMEPKSPEDLYNAHLLDGR-ASAGASVDSPRQNLAATLVNAFVNARFGHDKFMT 700 ++A + L+ LV+EIV ++M HNAE + + CLYLTS Y+P P++ +L A ++ +F FP AL++AL L++M+ V+ IFTSC D++ +KQ +L RHG+ LEL L ++++NV+L+ +L LAR++++MEPK P+D+Y HL + R +G+ VDS R NLA++ VN FVNA FG DK +T Sbjct: 177 EKAQREPLLTLVKEIVPYNMAHNAEHEACDLLMEIEQVDMLEKDIDENAYAKVCLYLTSCVNYVPEPENSALLRCALGVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQKQMAFMLGRHGVFLELSEDVEEYED----LTEIMSNVQLNSNFLALARELDIMEPKVPDDIYKTHLENNRFGGSGSQVDSARMNLASSFVNGFVNAAFGQDKLLT 392
BLAST of EY720221 vs. ExPASy Swiss-Prot
Match: PSMD2_HUMAN (26S proteasome non-ATPase regulatory subunit 2 OS=Homo sapiens GN=PSMD2 PE=1 SV=3) HSP 1 Score: 162.54 bits (410), Expect = 2.826e-39 Identity = 84/215 (39.07%), Postives = 128/215 (59.53%), Query Frame = 2 Query: 59 DDLMELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLYLTSAAKYLPGPDDMLVLDIAYMIYLRFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKKQFCDILARHGITLELXXXXXXXXXXRYALQDLVNNVKLSEGYLTLARDIEVMEPKSPEDLYNAHLLDGR-ASAGASVDSPRQNLAATLVNAFVNARFGHDKFMT 700 + L+ LV+EIV ++M HNAE + + CLYLTS Y+P P++ +L A ++ +F FP AL++AL L++M+ V+ IFTSC D++ +KQ +L RHG+ LEL L ++++NV+L+ +L LAR++++MEPK P+D+Y HL + R +G+ VDS R NLA++ VN FVNA FG DK +T Sbjct: 182 EPLLTLVKEIVPYNMAHNAEHEACDLLMEIEQVDMLEKDIDENAYAKVCLYLTSCVNYVPEPENSALLRCALGVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQKQMAFMLGRHGVFLELSEDVEEYED----LTEIMSNVQLNSNFLALARELDIMEPKVPDDIYKTHLENNRFGGSGSQVDSARMNLASSFVNGFVNAAFGQDKLLT 392
BLAST of EY720221 vs. ExPASy Swiss-Prot
Match: PSMD2_BOVIN (26S proteasome non-ATPase regulatory subunit 2 OS=Bos taurus GN=PSMD2 PE=1 SV=2) HSP 1 Score: 162.54 bits (410), Expect = 2.826e-39 Identity = 84/215 (39.07%), Postives = 128/215 (59.53%), Query Frame = 2 Query: 59 DDLMELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLYLTSAAKYLPGPDDMLVLDIAYMIYLRFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKKQFCDILARHGITLELXXXXXXXXXXRYALQDLVNNVKLSEGYLTLARDIEVMEPKSPEDLYNAHLLDGR-ASAGASVDSPRQNLAATLVNAFVNARFGHDKFMT 700 + L+ LV+EIV ++M HNAE + + CLYLTS Y+P P++ +L A ++ +F FP AL++AL L++M+ V+ IFTSC D++ +KQ +L RHG+ LEL L ++++NV+L+ +L LAR++++MEPK P+D+Y HL + R +G+ VDS R NLA++ VN FVNA FG DK +T Sbjct: 182 EPLLTLVKEIVPYNMAHNAEHEACDLLMEIEQVDMLEKDIDENAYAKVCLYLTSCVNYVPEPENSALLRCALGVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQKQMAFMLGRHGVFLELSEDVEEYED----LTEIMSNVQLNSNFLALARELDIMEPKVPDDIYKTHLENNRFGGSGSQVDSARMNLASSFVNGFVNAAFGQDKLLT 392
BLAST of EY720221 vs. ExPASy Swiss-Prot
Match: PSMD2_PONAB (26S proteasome non-ATPase regulatory subunit 2 OS=Pongo abelii GN=PSMD2 PE=2 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 3.691e-39 Identity = 83/215 (38.60%), Postives = 128/215 (59.53%), Query Frame = 2 Query: 59 DDLMELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLYLTSAAKYLPGPDDMLVLDIAYMIYLRFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKKQFCDILARHGITLELXXXXXXXXXXRYALQDLVNNVKLSEGYLTLARDIEVMEPKSPEDLYNAHLLDGR-ASAGASVDSPRQNLAATLVNAFVNARFGHDKFMT 700 + L+ LV+EI+ ++M HNAE + + CLYLTS Y+P P++ +L A ++ +F FP AL++AL L++M+ V+ IFTSC D++ +KQ +L RHG+ LEL L ++++NV+L+ +L LAR++++MEPK P+D+Y HL + R +G+ VDS R NLA++ VN FVNA FG DK +T Sbjct: 182 EPLLTLVKEIIPYNMAHNAEHEACDLLMEIEQVDMLEKDIDENAYAKVCLYLTSCVNYVPEPENSALLRCALGVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQKQMAFMLGRHGVFLELSEDVEEYED----LTEIMSNVQLNSNFLALARELDIMEPKVPDDIYKTHLENNRFGGSGSQVDSARMNLASSFVNGFVNAAFGQDKLLT 392
BLAST of EY720221 vs. ExPASy Swiss-Prot
Match: PSMD2_DICDI (26S proteasome non-ATPase regulatory subunit 2 OS=Dictyostelium discoideum GN=psmD2 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 7.963e-34 Identity = 79/222 (35.59%), Postives = 127/222 (57.21%), Query Frame = 2 Query: 44 DEASIDDLMELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLYLTSAAKYLPGPDDMLVLDIAYMIYLRFEEFPNALQIALFLDNMQYVKQIFTSCDD---LLRKKQFCDILARHGITLELXXXXXXXXXXRYALQDLVNNVKLSEGYLTLARDIEVMEPKSPEDLYNAHLLDGRASAGASVDSPRQNLAATLVNAFVNARFGHDKFMT 700 + S++DL++LV EIV F M HNAEP N+ R CLYL + Y+PGPDD+ +L + IY++ +++P+AL++A+ + + + + +IF ++ +L++ F ++AR I + ++ D++NN KLSE ++ LA D+++ EPK PE+++ +HL S A DS R NLA++ VNAFVNA FG DK MT Sbjct: 187 ENQSVEDLLKLVDEIVPFQMTHNAEPEACDLLLEVEQLSKIFQYIDENNYSRVCLYLFKCSYYVPGPDDINILKVCVEIYIKMKQYPDALRVAMKISDPELITEIFKLVENNKSILQQLGF--LVARQKIVPDNFNYD--------SISDIINNSKLSEYFMNLATDLDIREPKLPEEIFQSHL----DSTSAIADSARMNLASSFVNAFVNAGFGKDKLMT 394
BLAST of EY720221 vs. ExPASy Swiss-Prot
Match: RPN1_SCHPO (26S proteasome regulatory subunit rpn1 OS=Schizosaccharomyces pombe GN=rpn1 PE=1 SV=2) HSP 1 Score: 137.502 bits (345), Expect = 9.735e-32 Identity = 81/221 (36.65%), Postives = 116/221 (52.49%), Query Frame = 2 Query: 38 QTDEASIDDLMELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLYLTSAAKYLPGPDDMLVLDIAYMIYLRFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKKQFCDILARHGITLELXXXXXXXXXXRYALQDLVNNVKLSEGYLTLARDIEVMEPKSPEDLYNAHLLDGRASAGAS-VDSPRQNLAATLVNAFVNARFGHDKFM 697 Q +EA DDLMEL IV F + HNAE N R CLY+TS LP P+D+ +L A+ IY +F++ AL +A+ LD+M +K+ + D L KKQ +LAR I +++ L D +NN LS+ + L +++ +M+PK PED++ HL R GAS V S +QNLA T VNA VNA + +D+ + Sbjct: 177 QEEEAPTDDLMELALTIVPFFLTHNAEADAIDLLQELGAIEKVVPFVELDNASRVCLYITSCVNLLPFPEDVAMLRTAHAIYRKFDQLTQALNVAIRLDDMSLIKEDCEAATDPLLKKQMSYMLARQQIPMDMGDE---------ELNDALNNTHLSDHFHYLGKELNLMDPKVPEDIFKTHLEVARTGLGASGVYSAKQNLANTFVNALVNAGYSNDRLI 388
BLAST of EY720221 vs. ExPASy Swiss-Prot
Match: RPN1_CANGA (26S proteasome regulatory subunit RPN1 OS=Candida glabrata GN=RPN1 PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.718e-28 Identity = 73/219 (33.33%), Postives = 114/219 (52.05%), Query Frame = 2 Query: 47 EASIDDLMELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLYLTSAAKYLPGPDDMLVLDIAYMIYLRFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKKQFCDILARHGITLELXXXXXXXXXXRYALQDLVNNVKLSEGYLTLARDIEVMEPKSPEDLYNAHLLDGRA-SAGASVDSPRQNLAATLVNAFVNARFGHDKFMT 700 E S D +++L EIV + MKHN E +KR C Y+ + + LP P+D+ L AY IYL + P AL +A+ L N ++ +F + D + +Q ILA + E LQ+++ N KLSE +L LA+++ ++ PK PED+Y +HL ++ + A +DS +QNLAA+ VNAF+N + +DK +T Sbjct: 192 EFSKDVILQLSLEIVPYFMKHNGEEDAVDLLLEIEAIEKLPQFVDENTYKRVCQYMIACVQLLPPPEDISFLQTAYSIYLSELQLPEALSLAIRLGNEDMIRSVFDATSDPIVHQQLAYILAAQRVPFE-----------HPELQEIIGNTKLSEHFLYLAKELNLLTPKIPEDIYKSHLDSSKSVFSSAGLDSAQQNLAASFVNAFLNLGYCNDKMIT 399
BLAST of EY720221 vs. ExPASy Swiss-Prot
Match: RPN1_NEUCR (26S proteasome regulatory subunit rpn-1 OS=Neurospora crassa GN=rpn-1 PE=3 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 3.033e-25 Identity = 67/213 (31.46%), Postives = 109/213 (51.17%), Query Frame = 2 Query: 62 DLMELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLYLTSAAKYLPGPDDMLVLDIAYMIYLRFEEFPNALQIALFLDNMQYVKQIFTSCD-DLLRKKQFCDILARHGITLELXXXXXXXXXXRYALQDLVNNVKLSEGYLTLARDIEVMEPKSPEDLYNAHLLDGRASAGASVDSPRQNLAATLVNAFVNARFGHDKFM 697 +L++L +V +K NAE + R CLY+ S L PD+ L +A+ IY ++ + A+ +A+ L+++ +++ F + D D +KQ ++AR GI LE + + ++N KLSE + +L +++ ++EPK+ ED+Y +HL R + + DS R NLAA VNAFVNA FG DK M Sbjct: 187 ELVDLALVLVPLFLKSNAEADAVDLMSELEIIEELPKFLDENTYSRVCLYMVSMVNLLTYPDNETFLRVAHSIYKKYNQHTQAMVLAIRLNDLGLIEKDFEAADEDPALRKQLAFLIARQGIPLEFERSNDDDEK----IYECLSNQKLSEYFKSLGKELNILEPKTTEDIYKSHLESSRVAGMTNFDSARHNLAAGFVNAFVNAGFGSDKMM 395
BLAST of EY720221 vs. ExPASy Swiss-Prot
Match: RPN1_YEAST (26S proteasome regulatory subunit RPN1 OS=Saccharomyces cerevisiae GN=RPN1 PE=1 SV=3) HSP 1 Score: 115.161 bits (287), Expect = 5.174e-25 Identity = 67/218 (30.73%), Postives = 109/218 (50.00%), Query Frame = 2 Query: 47 EASIDDLMELVQEIVAFHMKHNAEPXXXXXXXXXXXXXXXXXXXXATNFKRTCLYLTSAAKYLPGPDDMLVLDIAYMIYLRFEEFPNALQIALFLDNMQYVKQIFTSCDDLLRKKQFCDILARHGITLELXXXXXXXXXXRYALQDLVNNVKLSEGYLTLARDIEVMEPKSPEDLYNAHLLDGRA-SAGASVDSPRQNLAATLVNAFVNARFGHDKFM 697 E S +D + L +IV + +KHN E F+R C Y+ + LP P+D+ L AY IYL E +A+ +A+ L ++ +F + D + KQ ILA + E +QD++ N KLSE +L LA+++ + PK PED+Y +HL + ++ + A +DS +QNLA++ VN F+N + +DK + Sbjct: 194 EFSKEDTLRLCLDIVPYFLKHNGEEDAVDLLLEIESIDKLPQFVDENTFQRVCQYMVACVPLLPPPEDVAFLKTAYSIYLSQNELTDAIALAVRLGEEDMIRSVFDATSDPVMHKQLAYILAAQKTSFEYE-----------GVQDIIGNGKLSEHFLYLAKELNLTGPKVPEDIYKSHLDNSKSVFSSAGLDSAQQNLASSFVNGFLNLGYCNDKLI 400 The following BLAST results are available for this feature:
BLAST of EY720221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY720221 ID=EY720221; Name=EY720221; organism=Citrus sinensis; type=EST; length=884bpback to top |