EY719593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY719593 vs. ExPASy Swiss-Prot
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1) HSP 1 Score: 268.47 bits (685), Expect = 3.892e-77 Identity = 134/174 (77.01%), Postives = 151/174 (86.78%), Query Frame = 1 Query: 13 PLSFNGSGAATS-VPSSSFFGTSLKKVSSRIPPSKVPSASFKITA-EVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGHQP 528 PLS NGSGA S VPS++FFG+SLKK +++ P K S +FKI A E+ E++QT +D+WKGLAYD SDDQQDITRGKG VD+LFQAPM +GTHYAVMSSYDYISQGLR YNLDN +DG YIAPAFMDKLVVHITKNF+SLPNIK+PLILGIWGGKGQGKSFQCELVFAKMG P Sbjct: 15 PLSLNGSGARASLVPSTAFFGSSLKKSAAKFP--KASSGNFKIVAQEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINP 186 HSP 2 Score: 42.3578 bits (98), Expect = 3.892e-77 Identity = 20/27 (74.07%), Postives = 23/27 (85.19%), Query Frame = 2 Query: 512 RWGINPIMMSGRKLESGMAGKPAKLIR 592 + GINPIMMS +LESG AG+PAKLIR Sbjct: 181 KMGINPIMMSAGELESGNAGEPAKLIR 207
BLAST of EY719593 vs. ExPASy Swiss-Prot
Match: RCA2_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1) HSP 1 Score: 268.47 bits (685), Expect = 3.894e-77 Identity = 134/174 (77.01%), Postives = 151/174 (86.78%), Query Frame = 1 Query: 13 PLSFNGSGAATS-VPSSSFFGTSLKKVSSRIPPSKVPSASFKITA-EVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGHQP 528 PLS NGSGA S VPS++FFG+SLKK +++ P K S +FKI A E+ E++QT +D+WKGLAYD SDDQQDITRGKG VD+LFQAPM +GTHYAVMSSYDYISQGLR YNLDN +DG YIAPAFMDKLVVHITKNF+SLPNIK+PLILGIWGGKGQGKSFQCELVFAKMG P Sbjct: 15 PLSLNGSGARASLVPSTAFFGSSLKKSAAKFP--KASSGNFKIVAQEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINP 186 HSP 2 Score: 42.3578 bits (98), Expect = 3.894e-77 Identity = 20/27 (74.07%), Postives = 23/27 (85.19%), Query Frame = 2 Query: 512 RWGINPIMMSGRKLESGMAGKPAKLIR 592 + GINPIMMS +LESG AG+PAKLIR Sbjct: 181 KMGINPIMMSAGELESGNAGEPAKLIR 207
BLAST of EY719593 vs. ExPASy Swiss-Prot
Match: RCA_MALDO (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1) HSP 1 Score: 270.011 bits (689), Expect = 3.261e-76 Identity = 130/172 (75.58%), Postives = 147/172 (85.47%), Query Frame = 1 Query: 13 PLSFNGSGAATSVPSSSFFGTSLKKVSSRIPPSKVPSASFKITAEVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGHQP 528 P + NGS ++ SVPSS+F G+SLKKV+SR SKV S S +I A VDE+KQT +DRWKGLA+D SDDQQDITRGKG VDSLFQAP G+GTH+A+MSSY+YIS GLR YN DN +DG YIAPAFMDKLVVHITKNFM+LPN+KVPLILGIWGGKGQGKSFQCELVFAKM P Sbjct: 15 PPNLNGSSSSASVPSSTFLGSSLKKVNSRFTNSKVSSGSLRIVASVDEDKQTDKDRWKGLAFDTSDDQQDITRGKGKVDSLFQAPQGSGTHFAIMSSYEYISTGLRQYNFDNNMDGYYIAPAFMDKLVVHITKNFMTLPNMKVPLILGIWGGKGQGKSFQCELVFAKMRISP 186 HSP 2 Score: 37.7354 bits (86), Expect = 3.261e-76 Identity = 18/24 (75.00%), Postives = 21/24 (87.50%), Query Frame = 2 Query: 521 INPIMMSGRKLESGMAGKPAKLIR 592 I+PIMMS +LESG AG+PAKLIR Sbjct: 184 ISPIMMSAGELESGNAGEPAKLIR 207
BLAST of EY719593 vs. ExPASy Swiss-Prot
Match: RCA_PHAVU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus vulgaris GN=RCA1 PE=2 SV=1) HSP 1 Score: 262.692 bits (670), Expect = 2.093e-75 Identity = 131/175 (74.86%), Postives = 146/175 (83.43%), Query Frame = 1 Query: 16 LSFNGSGAATSVPSSSFFGTSLKKV-SSRIPPSKVPSASFKITA---EVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGHQP 528 L+ NGSG S PSS+FFGTSLKKV SSR+P SK+ S SFKI A E++E +QT+ DRW+GLAYD SDDQQDITRGKG VDSLFQAPM GTHYAV+SS+ Y+S GLR YN DN DG YIAPAF+DKLVVHI KNFM+LPNIKVPLILG+WGGKGQGKSFQCELVFAKMG P Sbjct: 16 LNLNGSGGGASGPSSAFFGTSLKKVISSRVPNSKLTSGSFKIVAADKEIEETQQTEGDRWRGLAYDVSDDQQDITRGKGLVDSLFQAPMDAGTHYAVISSHKYLSAGLRQYNFDNIKDGFYIAPAFLDKLVVHIAKNFMTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINP 190 HSP 2 Score: 42.3578 bits (98), Expect = 2.093e-75 Identity = 20/27 (74.07%), Postives = 23/27 (85.19%), Query Frame = 2 Query: 512 RWGINPIMMSGRKLESGMAGKPAKLIR 592 + GINPIMMS +LESG AG+PAKLIR Sbjct: 185 KMGINPIMMSAGELESGNAGEPAKLIR 211
BLAST of EY719593 vs. ExPASy Swiss-Prot
Match: RCA1_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 5.535e-73 Identity = 128/176 (72.73%), Postives = 141/176 (80.11%), Query Frame = 1 Query: 13 PLSFNGSGAATSVPSSSFFGTSLKKVSSR-IPPSKVPSASFKITAE---VDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGHQP 528 PLS N S A TSVPS++FFG +LKKV + + KV + S +I AE VD KQT DRWKGL D SDDQQDITRGKG VDSLFQAP GTGTH+AV+ SY+Y+SQGLR YNLDN +DG YIAPAFMDKLVVHITKNF+ LPNIKVPLILGIWGGKGQGKSFQCELVF KMG P Sbjct: 15 PLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNKSLRIVAEQIDVDPKKQTDSDRWKGLVQDFSDDQQDITRGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILGIWGGKGQGKSFQCELVFRKMGINP 190 HSP 2 Score: 42.3578 bits (98), Expect = 5.535e-73 Identity = 20/27 (74.07%), Postives = 23/27 (85.19%), Query Frame = 2 Query: 512 RWGINPIMMSGRKLESGMAGKPAKLIR 592 + GINPIMMS +LESG AG+PAKLIR Sbjct: 185 KMGINPIMMSAGELESGNAGEPAKLIR 211
BLAST of EY719593 vs. ExPASy Swiss-Prot
Match: RCA2_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Nicotiana tabacum GN=RCA PE=2 SV=1) HSP 1 Score: 251.136 bits (640), Expect = 6.041e-72 Identity = 125/180 (69.44%), Postives = 141/180 (78.33%), Query Frame = 1 Query: 1 AAAVPLSFNGSGAATSVPSSSFFGTSLKKVSSR-IPPSKVPSASFKITAE---VDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGHQP 528 A PLS N S A TSVPS++FFG +LKKV + + KV + S +I AE D KQT DRWKGL D SDDQQDI RGKG VDSLFQAP GTGTH+AV+ SY+Y+SQGLR YN+DNT+DG YIAP+FMDKLVVHITKNF+ LPNIKVPLILG+WGGKGQGKSFQCELVF KMG P Sbjct: 11 ANKAPLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNRSLRIAAEEKDADPKKQTYSDRWKGLVQDFSDDQQDIARGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNMDNTLDGFYIAPSFMDKLVVHITKNFLKLPNIKVPLILGVWGGKGQGKSFQCELVFRKMGINP 190 HSP 2 Score: 42.3578 bits (98), Expect = 6.041e-72 Identity = 20/27 (74.07%), Postives = 23/27 (85.19%), Query Frame = 2 Query: 512 RWGINPIMMSGRKLESGMAGKPAKLIR 592 + GINPIMMS +LESG AG+PAKLIR Sbjct: 185 KMGINPIMMSAGELESGNAGEPAKLIR 211
BLAST of EY719593 vs. ExPASy Swiss-Prot
Match: RCA_SOLPN (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Solanum pennellii PE=2 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 1.906e-70 Identity = 123/178 (69.10%), Postives = 145/178 (81.46%), Query Frame = 1 Query: 1 AAAVPLSFNGSGAATSVPSSSFFGTSLKKVSSR-IPPSKVPSASFKITA-EVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGHQP 528 A+ PLS N S A TSVPS++FFG SLKKV ++ + KV + + ++ A EVDE TK+DRWKGL + SDDQQDI RGKG VDSLFQAP GTGTH+A+M+SY+Y+SQ L+TY LDN +DG YIAPAFMDKLVVHITKNF++LPNIKVPLILG+WGGKGQGKSFQCELVF KMG P Sbjct: 11 ASKAPLSLNNSVAGTSVPSTAFFGKSLKKVYAKGVSSPKVSNRNLRVVAQEVDE---TKEDRWKGLYDNTSDDQQDIARGKGLVDSLFQAPTGTGTHHAIMNSYEYVSQALKTYQLDNKLDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFRKMGINP 185 HSP 2 Score: 42.3578 bits (98), Expect = 1.906e-70 Identity = 20/27 (74.07%), Postives = 23/27 (85.19%), Query Frame = 2 Query: 512 RWGINPIMMSGRKLESGMAGKPAKLIR 592 + GINPIMMS +LESG AG+PAKLIR Sbjct: 180 KMGINPIMMSAGELESGNAGEPAKLIR 206
BLAST of EY719593 vs. ExPASy Swiss-Prot
Match: RCA_CUCSA (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 1.908e-70 Identity = 119/170 (70.00%), Postives = 138/170 (81.18%), Query Frame = 1 Query: 19 SFNGSGAATSVPSSSFFGTSLKKVSSRIPPSKVPSASFKITAEVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGHQP 528 + N S VP+S+F G+ LK VSSR SK+ + +FKI AE DE KQT++D+W+GLA+D SDDQQDITRGKG D LFQAPMGTGTH AV+SSY+YIS GLR Y+ DN +DG YIAPAFMDKL VHI KNF++LPNIKVPLILG+WGGKGQGKSFQCELVFAKMG P Sbjct: 15 TLNNSNYGGLVPNSAFLGSRLK-VSSRFTTSKMVTGNFKIVAEQDEEKQTEKDKWRGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYEYISAGLRDYSYDNNVDGFYIAPAFMDKLTVHIVKNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINP 183 HSP 2 Score: 42.3578 bits (98), Expect = 1.908e-70 Identity = 20/27 (74.07%), Postives = 23/27 (85.19%), Query Frame = 2 Query: 512 RWGINPIMMSGRKLESGMAGKPAKLIR 592 + GINPIMMS +LESG AG+PAKLIR Sbjct: 178 KMGINPIMMSAGELESGNAGEPAKLIR 204
BLAST of EY719593 vs. ExPASy Swiss-Prot
Match: RCA_PHAAU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2 SV=2) HSP 1 Score: 263.462 bits (672), Expect = 1.257e-69 Identity = 143/222 (64.41%), Postives = 167/222 (75.23%), Query Frame = 1 Query: 16 LSFNGSGAATSVPSSSFFGTSLKK-VSSRIPPSKVPSASFKITA---EVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGHQPNYDEWPKIGKWHGWKTR*IDQAEGTVEGNLIYSGKGKKCGWLWINDI 669 L+ NGSGA S P+S+FFGTSLKK V+SR+P SKV + SFKI A E++E++QT +DRWKGLAYD SDDQQDITRGKG VD LFQAPM GTHYAVMSSY+Y+S GLR LDN DG YIAPAF+DKLVVHITKNFM+LPNIKVPLILGIWGGKGQGKSFQCELVFAKMG P ++ + + + + +LI KGK C L+IND+ Sbjct: 16 LNLNGSGAGASAPTSAFFGTSLKKAVASRVPNSKVTNGSFKIVAAEKEIEESQQTNKDRWKGLAYDISDDQQDITRGKGMVDPLFQAPMDAGTHYAVMSSYEYLSTGLR--QLDNIKDGFYIAPAFLDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLI--AKGKMCA-LFINDL 232
BLAST of EY719593 vs. ExPASy Swiss-Prot
Match: RCA_ARATH (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2) HSP 1 Score: 253.447 bits (646), Expect = 1.301e-66 Identity = 140/230 (60.87%), Postives = 167/230 (72.61%), Query Frame = 1 Query: 13 PLSFNGSGA-ATSVPSSSFFGTSLKKVSSRIPPSKVPSASFKITAEVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGHQPNYDEWPKIGKWHGWKTR*IDQAEGTVEGNLIYSGKGKKCGWLWINDI*AWSWIGGMG 699 PLS NGSG+ A S P+S+F G + VS +K + SFK+ A V E+KQT DRW+GLAYD SDDQQDITRGKG VDS+FQAPMGTGTH+AV+SSY+Y+SQGLR YNLDN +DG YIAPAFMDKLVVHITKNF++LPNIKVPLILGIWGGKGQGKSFQCELV AKMG P ++ + + + + +LI KGK C L+IND+ A + G MG Sbjct: 15 PLSLNGSGSGAVSAPASTFLGKKVVTVSRFAQSNKKSNGSFKVLA-VKEDKQTDGDRWRGLAYDTSDDQQDITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGLRQYNLDNMMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELVMAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLI--KKGKMC-CLFINDLDAGA--GRMG 238 The following BLAST results are available for this feature:
BLAST of EY719593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >EY719593 ID=EY719593; Name=EY719593; organism=Citrus sinensis; type=EST; length=924bpback to top |