EY691968

Overview
NameEY691968
Unique NameEY691968
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length479
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY691968 vs. ExPASy Swiss-Prot
Match: SPCS2_ARATH (Probable signal peptidase complex subunit 2 OS=Arabidopsis thaliana GN=At2g39960 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 6.142e-38
Identity = 77/92 (83.70%), Postives = 83/92 (90.22%), Query Frame = 1 
Query:    1 LIIHTKEKNAILFTYPPEGSFTSTGLVVSSKLPRFSDLYTLTVASADPKSISAGQPVEFTKSVTQWFAKDGVLVEGLFWKDVLALLDEYAIE 276
            LI++TKEKNAILFTYPPEGSFTSTGLVVSSKLPRFSD YTLT+ SADPKSISAG+ V+ TKSVTQWF KDGVLVEGLFWKDV AL+  YA E
Sbjct:   95 LILYTKEKNAILFTYPPEGSFTSTGLVVSSKLPRFSDQYTLTIDSADPKSISAGKSVQLTKSVTQWFTKDGVLVEGLFWKDVEALIKNYAEE 186
The following BLAST results are available for this feature:
BLAST of EY691968 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
SPCS2_ARATH6.142e-3883.70Probable signal peptidase complex subunit 2 OS=Ara... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-102-H06-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY691968 ID=EY691968; Name=EY691968; organism=Citrus sinensis; type=EST; length=479bp
CTAATCATACACACTAAGGAAAAGAACGCAATCTTGTTTACCTATCCTCC
TGAGGGCTCGTTCACTAGCACTGGTTTGGTGGTTTCTTCTAAATTGCCAA
GATTTTCTGATCTCTACACGCTGACAGTAGCGAGTGCGGATCCAAAATCA
ATTTCTGCTGGGCAACCAGTAGAGTTTACTAAAAGCGTCACCCAGTGGTT
CGCCAAAGATGGAGTTCTGGTGGAGGGCTTATTCTGGAAAGATGTTCTCG
CACTCCTTGATGAATATGCCATAGAACCGAAGAAGAAAAAGTGATCTATA
AAACTTAAGATCTCCTGTCATAGGTTATCGGTTAGAGATATCCAGTAACA
TTATGATTTGGTATGGATGTTATTCATAATCAAGGATTCTCTTATTAGAA
AATTTTTGGAACCAAACCAATGAATGGAATTTTCATTAAAAGGGAAGAAA
TAAAAAACATAGAAAAAAAAAAAAAATAG
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