EY691854
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY691854 vs. ExPASy Swiss-Prot
Match: CIRBB_XENLA (Cold-inducible RNA-binding protein B OS=Xenopus laevis GN=cirbp-B PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 8.003e-12 Identity = 36/87 (41.38%), Postives = 59/87 (67.82%), Query Frame = 3 Query: 246 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIA-KPGKERFGGY 503 ++ + L F T+E +L++ FS +G+++EV +VKD TK+S+G+ F+ + + DDA A+ +M+ K +DGR I VD A K +R GGY Sbjct: 6 KLFIGGLNFDTNEESLEQVFSKYGQISEVVVVKDRETKRSRGFGFVTFENPDDAKDAMMAMNGKAVDGRQIRVDQAGKSSGDRRGGY 92
BLAST of EY691854 vs. ExPASy Swiss-Prot
Match: CIRBP_XENTR (Cold-inducible RNA-binding protein OS=Xenopus tropicalis GN=cirbp PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.045e-11 Identity = 37/87 (42.53%), Postives = 59/87 (67.82%), Query Frame = 3 Query: 246 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIA-KPGKERFGGY 503 ++ V L F T E +L++ FS +G+VAEV +VKD +K+S+G+ F+ + + +DA A+ +M+ K++DGR I VD A K +R GGY Sbjct: 7 KLFVGGLNFETTEESLEQVFSKYGQVAEVVVVKDRESKRSRGFGFVTFENPEDAKDAMMAMNGKSVDGRQIRVDQAGKSSNDRRGGY 93
BLAST of EY691854 vs. ExPASy Swiss-Prot
Match: MRD1_DICDI (Multiple RNA-binding domain-containing protein 1 OS=Dictyostelium discoideum GN=mrd1 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.365e-11 Identity = 39/82 (47.56%), Postives = 53/82 (64.63%), Query Frame = 3 Query: 240 ASRIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIAKPGK 485 + RI VRNL ++T E L+K FS FG+++E+ + D +KKSKG AFI Y ++A+ AL MD K GRLI+V PGK Sbjct: 360 SGRIFVRNLSYSTKEEDLEKVFSKFGKISEIHIPIDYDSKKSKGIAFILYLIPENAVQALNDMDGKVFQGRLIHV---LPGK 438
BLAST of EY691854 vs. ExPASy Swiss-Prot
Match: CIRBA_XENLA (Cold-inducible RNA-binding protein A OS=Xenopus laevis GN=cirbp-A PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 1.365e-11 Identity = 36/87 (41.38%), Postives = 58/87 (66.67%), Query Frame = 3 Query: 246 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIA-KPGKERFGGY 503 ++ + L F T+E L++ F+ +G ++EV +VKD TK+S+G+ F+ + + DDA A+ +M+ K++DGR I VD A K ER GGY Sbjct: 6 KLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMAMNGKSVDGRQIRVDQAGKSSGERRGGY 92
BLAST of EY691854 vs. ExPASy Swiss-Prot
Match: CIRBP_RANCA (Cold-inducible RNA-binding protein OS=Rana catesbeiana GN=cirbp PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 6.775e-11 Identity = 36/87 (41.38%), Postives = 54/87 (62.07%), Query Frame = 3 Query: 246 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIA-KPGKERFGGY 503 ++ V L F T E L+ FS +G++ EV +VKD TK+S+G+ F+ + + +DA A+ M+ K +DGR I VD A K +R GGY Sbjct: 7 KLFVGGLSFDTDEQCLETVFSKYGQIQEVVVVKDRETKRSRGFGFVTFENCEDAKDAMAGMNGKTVDGRQIRVDQAGKSSNDRRGGY 93
BLAST of EY691854 vs. ExPASy Swiss-Prot
Match: CIRBP_PONAB (Cold-inducible RNA-binding protein OS=Pongo abelii GN=CIRBP PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 8.848e-11 Identity = 35/87 (40.23%), Postives = 58/87 (66.67%), Query Frame = 3 Query: 246 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIA-KPGKERFGGY 503 ++ V L F T+E +L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +M+ K++DGR I VD A K R GY Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKSSDNRSRGY 93
BLAST of EY691854 vs. ExPASy Swiss-Prot
Match: CIRBP_HUMAN (Cold-inducible RNA-binding protein OS=Homo sapiens GN=CIRBP PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 8.848e-11 Identity = 35/87 (40.23%), Postives = 58/87 (66.67%), Query Frame = 3 Query: 246 RIMVRNLPFTTHEHTLQKEFSAFGEVAEVKLVKDEITKKSKGYAFIQYTSQDDALLALESMDHKNLDGRLIYVDIA-KPGKERFGGY 503 ++ V L F T+E +L++ FS +G+++EV +VKD T++S+G+ F+ + + DDA A+ +M+ K++DGR I VD A K R GY Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKSSDNRSRGY 93 The following BLAST results are available for this feature:
BLAST of EY691854 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY691854 ID=EY691854; Name=EY691854; organism=Citrus sinensis; type=EST; length=1014bpback to top |