EY687018
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY687018 vs. ExPASy Swiss-Prot
Match: ESF1_RAT (ESF1 homolog OS=Rattus norvegicus GN=Esf1 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.179e-18 Identity = 52/113 (46.02%), Postives = 64/113 (56.64%), Query Frame = 2 Query: 509 PEIDNETHRLAIVNMDWRHVKAVDLLVILSSFLPKDGQILSVAVYPSEFGIQRMKEGEVRGPVGLFDSQXXXXXXXXXXXXXXXKLRAYEKSTLRYCYAGVEWDSRGTADCLY 847 P D T RLA+ NMDW +KA DLL + +SF PK G + SV +YPSEFG QRMKE +++GPV L KLR Y+ L+Y YA VE DS TA +Y Sbjct: 333 PRADEITRRLAVCNMDWDRLKAKDLLALFNSFKPKGGVVFSVKIYPSEFGKQRMKEEQIQGPVELLS---IPEDAPEKDWASREKLRDYQFKRLKYYYAVVECDSPETASKIY 442
BLAST of EY687018 vs. ExPASy Swiss-Prot
Match: ESF1_HUMAN (ESF1 homolog OS=Homo sapiens GN=ESF1 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.430e-18 Identity = 52/113 (46.02%), Postives = 64/113 (56.64%), Query Frame = 2 Query: 509 PEIDNETHRLAIVNMDWRHVKAVDLLVILSSFLPKDGQILSVAVYPSEFGIQRMKEGEVRGPVGLFDSQXXXXXXXXXXXXXXXKLRAYEKSTLRYCYAGVEWDSRGTADCLY 847 P D T RLA+ NMDW +KA DLL + +SF PK G I SV +YPSEFG +RMKE +V+GPV L KLR Y+ L+Y YA V+ DS TA +Y Sbjct: 341 PRADEITRRLAVCNMDWDRLKAKDLLALFNSFKPKGGVIFSVKIYPSEFGKERMKEEQVQGPVELLS---IPEDAPEKDWTSREKLRDYQFKRLKYYYAVVDCDSPETASKIY 450
BLAST of EY687018 vs. ExPASy Swiss-Prot
Match: ESF1_MOUSE (ESF1 homolog OS=Mus musculus GN=Esf1 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.850e-18 Identity = 51/113 (45.13%), Postives = 63/113 (55.75%), Query Frame = 2 Query: 509 PEIDNETHRLAIVNMDWRHVKAVDLLVILSSFLPKDGQILSVAVYPSEFGIQRMKEGEVRGPVGLFDSQXXXXXXXXXXXXXXXKLRAYEKSTLRYCYAGVEWDSRGTADCLY 847 P D T RLA+ NMDW +KA DLL + +SF PK G + SV +YPSEFG +RMKE +V+GPV L KLR Y+ L+Y YA E DS TA +Y Sbjct: 335 PRADEITRRLAVCNMDWDRLKAKDLLALFNSFKPKGGVVFSVKIYPSEFGKERMKEEQVQGPVELLS---IPEDAPEKDWASREKLRDYQFKRLKYYYAVAECDSPETASKIY 444
BLAST of EY687018 vs. ExPASy Swiss-Prot
Match: ESF1_SCHPO (Pre-rRNA-processing protein esf1 OS=Schizosaccharomyces pombe GN=esf1 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.033e-14 Identity = 52/137 (37.96%), Postives = 67/137 (48.91%), Query Frame = 2 Query: 521 NETHRLAIVNMDWRHVKAVDLLVILSSFLPKDGQILSVAVYPSEFGIQRMKEGEVRGPV-GLF---------------------------DSQXXXXXXXXXXXXXXXKLRAYEKSTLRYCYAGVEWDSRGTADCLY 847 +ET+RLA+VNMDW +++AVDL V LSSF P G++L V++YPSEFG RM V+GP +F D + KLR Y+ LRY YA VE DS TA +Y Sbjct: 177 SETNRLAVVNMDWDNLQAVDLFVALSSFCPPGGKLLKVSIYPSEFGKSRMAAEHVQGPPRDIFTPADNQPSSAELHEAQKFGFDNNESDQDEEDALIEEDLGNEFDMVKLRQYQLERLRYYYAVVECDSVRTAKVIY 313
BLAST of EY687018 vs. ExPASy Swiss-Prot
Match: ESF1_ASHGO (Pre-rRNA-processing protein ESF1 OS=Ashbya gossypii GN=ESF1 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.924e-14 Identity = 49/130 (37.69%), Postives = 67/130 (51.54%), Query Frame = 2 Query: 509 PEIDNETHRLAIVNMDWRHVKAVDLLVILSSFLPKDGQILSVAVYPSEFGIQRMKEGEVRGPV-GLFDSQXXXXXXXXXXXXXXXK----------------LRAYEKSTLRYCYAGVEWDSRGTADCLY 847 PE + + LA+VN+DW HVK DLLV +SF+P+ G+I VA+YPSEFG +RM+ EV GP +F S+ K LR Y+ LRY YA V ++ TA+ +Y Sbjct: 144 PESGDPSKVLAVVNLDWDHVKCADLLVAFNSFVPEGGKIERVAIYPSEFGKERMQREEVEGPPREVFKSKKDKKAKQDDDDEIGLKDLYEQGDAEKDYDSKALRRYQLERLRYYYAVVYCNNVATAEAIY 273
BLAST of EY687018 vs. ExPASy Swiss-Prot
Match: ESF1_YEAST (Pre-rRNA-processing protein ESF1 OS=Saccharomyces cerevisiae GN=ESF1 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.322e-13 Identity = 35/64 (54.69%), Postives = 47/64 (73.44%), Query Frame = 2 Query: 503 AIPEIDNETHRLAIVNMDWRHVKAVDLLVILSSFLPKDGQILSVAVYPSEFGIQRMKEGEVRGP 694 A PE + + LA+VN+DW HVK+ DL++ SSF+PK G+I VA+YPSEFG +RM+ EV GP Sbjct: 138 AKPESGDISKNLAVVNLDWDHVKSEDLMITFSSFVPKGGKIERVAIYPSEFGKERMQREEVEGP 201 The following BLAST results are available for this feature:
BLAST of EY687018 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY687018 ID=EY687018; Name=EY687018; organism=Citrus sinensis; type=EST; length=861bpback to top |