EY687017
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY687017 vs. ExPASy Swiss-Prot
Match: C3H47_ARATH (Zinc finger CCCH domain-containing protein 47 OS=Arabidopsis thaliana GN=At3g55980 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 6.506e-30 Identity = 81/183 (44.26%), Postives = 103/183 (56.28%), Query Frame = 3 Query: 12 MRQNMNQQLRSSYPASSSPVR-PSQSFGIDTSGAIAAAVLSSRSAAFAKRSQSFIERNTVSRHSGFSSPDSTAAVMPSNLADWGSPDGKLDWGVQREDLNKLRKSASFGIRSNGGSVATSETSTPATADEPDVSWVQSLVRDSPSIRSGQFGFEEQQCHLNSGGSEMLPAWVEQLYMEQEQLV 557 M QNMNQ YP SSPVR P G ++S A A AV+ +RS AFAKRS SF +T A SNL+DWGSP+GKL+WG++ E+LNK+R+S SFGI N + A + DEPDVSWV SLV+DS + FG E+ + +W EQ+Y E+EQ V Sbjct: 431 MGQNMNQH----YP--SSPVRQPPSQHGFESSAAAAVAVMKARSTAFAKRSLSF--------------KPATQAAPQSNLSDWGSPNGKLEWGMKGEELNKMRRSVSFGIHGNNNNNAARD-----YRDEPDVSWVNSLVKDSTVVSERSFGMNER---------VRIMSWAEQMYREKEQTV 579
BLAST of EY687017 vs. ExPASy Swiss-Prot
Match: C3H29_ARATH (Zinc finger CCCH domain-containing protein 29 OS=Arabidopsis thaliana GN=At2g40140 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 3.570e-28 Identity = 77/175 (44.00%), Postives = 104/175 (59.43%), Query Frame = 3 Query: 48 YPASSSPVRPSQSFGIDTSGAIAAAVLSSRSAAFAKRSQSFIERNTVSRHSGFSSPDSTAAVMPSNLADWGSPDGKLDWGVQREDLNKLRKSASFGIRSNGGSVATSETSTPAT--ADEPDVSWVQSLVRDSPSIRSGQFGFEEQQCHLNSGGSE---MLPAWVEQLYMEQEQLV 557 YP SSPVR G ++S A+AAAV+++RS+AFAKRS SF A + SN++DWGSP+GKL+WG+QR++LNKLR+SASFGI N + S PA +DEPDVSWV SLV+++ R E +N S LP+W EQ+Y++ EQ + Sbjct: 448 YP--SSPVRQPPPHGFESSAAMAAAVMNARSSAFAKRSLSF-----------------KPAPVASNVSDWGSPNGKLEWGMQRDELNKLRRSASFGIHGNN----NNSVSRPARDYSDEPDVSWVNSLVKENAPERVN----ERVGNTVNGAASRDKFKLPSWAEQMYIDHEQQI 595
BLAST of EY687017 vs. ExPASy Swiss-Prot
Match: C3H33_ORYSJ (Zinc finger CCCH domain-containing protein 33 OS=Oryza sativa subsp. japonica GN=Os05g0128200 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.694e-25 Identity = 69/143 (48.25%), Postives = 88/143 (61.54%), Query Frame = 3 Query: 9 PMRQNMNQQLRSSYPASSSPVRPSQSFGIDTSGAIAAAVLSSRSAAFAKRSQSFIERN-TVSRHSGFSSPDSTAAVMPSNLADWGSPDGKLDWGVQREDLNKLRKSASFGIRSNGGSVATSETSTPATADEPDVSWVQSLVRD 434 P +M + P S + +FG+D S +A A++SSR++AFAKRSQSFI+R SP +T A PS L+DWGSPDGKLDWGVQ ++L+KLRKSASF R + +T A A EPDVSWV SLV+D Sbjct: 448 PAYSSMADTTQMHMPTSPMVGGANTAFGLDHS--MAKAIMSSRASAFAKRSQSFIDRGGRAPAARSLMSPATTGA--PSILSDWGSPDGKLDWGVQGDELHKLRKSASFAFRGQ----SAMPVATHAAAAEPDVSWVNSLVKD 582
BLAST of EY687017 vs. ExPASy Swiss-Prot
Match: C3H66_ARATH (Zinc finger CCCH domain-containing protein 66 OS=Arabidopsis thaliana GN=At5g58620 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 6.302e-25 Identity = 80/184 (43.48%), Postives = 100/184 (54.35%), Query Frame = 3 Query: 15 RQNMNQQLRSSYPASSSPVRPSQSFGIDTSGAIAAAVLSSRSAAFAK-RSQSFIERNT-VSRHSGFSSPDSTAAVMPSNLADWGSPDGKLDWGVQREDLNKLRKSASFGIRSNGGSVATSETSTPATADEPDVSWVQSLVRDSPSIRSGQFGFEEQQCHLNSGGSEMLPAWVEQLYMEQEQLVA 560 R +N QL S+ SSSPV + F +D+S AVL+SR+A FAK RSQSFIERN ++ H SS +T L DWGS DGKLDW VQ ++L KLRKS SF +R+ G T +EPDVSWV+ LV++ R + P W+EQ YME EQ VA Sbjct: 457 RSVINPQLHSN-SLSSSPVGANSLFSMDSS-----AVLASRAAEFAKQRSQSFIERNNGLNHHPAISSMTTTC------LNDWGSLDGKLDWSVQGDELQKLRKSTSFRLRAGGMESRLPNEGT--GLEEPDVSWVEPLVKEPQETR-------------------LAPVWMEQSYMETEQTVA 607
BLAST of EY687017 vs. ExPASy Swiss-Prot
Match: C3H24_ORYSJ (Zinc finger CCCH domain-containing protein 24 OS=Oryza sativa subsp. japonica GN=Os03g0698800 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.103e-12 Identity = 55/149 (36.91%), Postives = 79/149 (53.02%), Query Frame = 3 Query: 27 NQQLRSSYPASSSPVRPSQSFGIDTSGAIAAAVLSSRS-------AAFAKRS-QSFIERNTVSRHSGFSSPDSTAAV---MPSNLADWGSPDGKLDWGVQREDLNKLRKSASFGIRSNGGSVATSETSTPATADEPDVSWVQSLVRDSP 440 NQQL P+ SS ++ S GI + G ++ + S S AA A+R Q R+ SR G S+ ++ V + S+ + WGSP G DWGV E+L KLR+S+SF +RS G D+PD+SWV +LV++SP Sbjct: 573 NQQL----PSHSSLLQAS--LGISSPGRMSPRCVESGSPMNSHLAAALAQREKQQQTMRSLSSRDLGPSAARASGVVGSPLSSSWSKWGSPSGTPDWGVNGEELGKLRRSSSFELRSGG--------------DDPDLSWVHTLVKESP 701 The following BLAST results are available for this feature:
BLAST of EY687017 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY687017 ID=EY687017; Name=EY687017; organism=Citrus sinensis; type=EST; length=849bpback to top |