EY686969

Overview
NameEY686969
Unique NameEY686969
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length838
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY686969 vs. ExPASy Swiss-Prot
Match: IDND_VITVI (L-idonate 5-dehydrogenase OS=Vitis vinifera GN=GSVIVT00012394001 PE=1 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 4.300e-50
Identity = 94/112 (83.93%), Postives = 101/112 (90.18%), Query Frame = 1
Query:   22 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 357
            TG+DVSFDC G NKTMSTAL AT AGGKVCLVG+   EMTVPLTPAA REVD+VG+FRY+NTWPLCLE LRSGKIDVKPL+THRF FSQK+VEEAFETSARGG AIKVMFNL
Sbjct:  255 TGVDVSFDCVGFNKTMSTALNATRAGGKVCLVGLAQSEMTVPLTPAAAREVDIVGIFRYRNTWPLCLEFLRSGKIDVKPLITHRFTFSQKDVEEAFETSARGGNAIKVMFNL 366          
BLAST of EY686969 vs. ExPASy Swiss-Prot
Match: DHSO_MOUSE (Sorbitol dehydrogenase OS=Mus musculus GN=Sord PE=1 SV=3)

HSP 1 Score: 100.908 bits (250), Expect = 9.342e-21
Identity = 51/110 (46.36%), Postives = 74/110 (67.27%), Query Frame = 1
Query:   19 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 348
            G+  +V+ +C G   ++ T + AT +GG + +VGMG   + +PL  AA+REVD+ GVFRY NTWP+ + +L S  ++VKPLVTHRF    ++  EAFET A+ G  +KVM
Sbjct:  241 GSKPEVTIECTGAESSVQTGIYATHSGGTLVIVGMGAEMVNLPLVHAAIREVDIKGVFRYCNTWPMAISMLASKTLNVKPLVTHRFPL--EKAVEAFET-AKKGVGLKVM 347          
BLAST of EY686969 vs. ExPASy Swiss-Prot
Match: DHSO_RAT (Sorbitol dehydrogenase OS=Rattus norvegicus GN=Sord PE=1 SV=4)

HSP 1 Score: 100.138 bits (248), Expect = 1.594e-20
Identity = 52/110 (47.27%), Postives = 74/110 (67.27%), Query Frame = 1
Query:   19 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 348
            G+  +V+ +C G   ++ T + AT +GG + +VGMG   + +PL  AAVREVD+ GVFRY NTWP+ + +L S  ++VKPLVTHRF    ++  EAFET A+ G  +KVM
Sbjct:  241 GSKPEVTIECTGAESSVQTGIYATHSGGTLVVVGMGPEMINLPLVHAAVREVDIKGVFRYCNTWPMAVSMLASKTLNVKPLVTHRFPL--EKAVEAFET-AKKGLGLKVM 347          
BLAST of EY686969 vs. ExPASy Swiss-Prot
Match: DHSO_SHEEP (Sorbitol dehydrogenase OS=Ovis aries GN=SORD PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.718e-20
Identity = 51/110 (46.36%), Postives = 73/110 (66.36%), Query Frame = 1
Query:   19 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 348
            G+  +V+ +C G+  ++   + AT +GG + LVG+G    +VPL  AA REVD+ GVFRY NTWP+ + +L S  ++VKPLVTHRF    ++  EAFETS + G  +KVM
Sbjct:  238 GSKPEVTIECTGVETSIQAGIYATHSGGTLVLVGLGSEMTSVPLVHAATREVDIKGVFRYCNTWPMAISMLASKSVNVKPLVTHRFPL--EKALEAFETSKK-GLGLKVM 344          
BLAST of EY686969 vs. ExPASy Swiss-Prot
Match: DHSO_BOVIN (Sorbitol dehydrogenase OS=Bos taurus GN=SORD PE=2 SV=3)

HSP 1 Score: 99.3673 bits (246), Expect = 2.718e-20
Identity = 51/110 (46.36%), Postives = 73/110 (66.36%), Query Frame = 1
Query:   19 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 348
            G+  +V+ +C G+  ++   + AT +GG + LVG+G    +VPL  AA REVD+ GVFRY NTWP+ + +L S  ++VKPLVTHRF    ++  EAFETS + G  +KVM
Sbjct:  240 GSKPEVTIECTGVETSIQAGIYATHSGGTLVLVGLGSEMTSVPLVHAATREVDIKGVFRYCNTWPMAISMLASKSVNVKPLVTHRFPL--EKALEAFETSKK-GLGLKVM 346          
BLAST of EY686969 vs. ExPASy Swiss-Prot
Match: DHSO_HUMAN (Sorbitol dehydrogenase OS=Homo sapiens GN=SORD PE=1 SV=3)

HSP 1 Score: 97.0561 bits (240), Expect = 1.349e-19
Identity = 49/106 (46.23%), Postives = 70/106 (66.04%), Query Frame = 1
Query:   31 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 348
            +V+ +C G   ++   + AT +GG + LVG+G    TVPL  AA+REVD+ GVFRY NTWP+ + +L S  ++VKPLVTHRF    ++  EAFET  + G  +K+M
Sbjct:  245 EVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTWPVAISMLASKSVNVKPLVTHRFPL--EKALEAFETFKK-GLGLKIM 347          
BLAST of EY686969 vs. ExPASy Swiss-Prot
Match: DHSO_MACFA (Sorbitol dehydrogenase OS=Macaca fascicularis GN=SORD PE=2 SV=3)

HSP 1 Score: 96.6709 bits (239), Expect = 1.762e-19
Identity = 48/106 (45.28%), Postives = 70/106 (66.04%), Query Frame = 1
Query:   31 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 348
            +V+ +C G   ++   + AT +GG + LVG+G    T+PL  AAVREVD+ GVFRY NTWP+ + +L S  +++KPLVTHRF    ++  EAFET  + G  +K+M
Sbjct:  245 EVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTIPLLHAAVREVDIKGVFRYCNTWPVAISMLASKSVNIKPLVTHRFPL--EKALEAFETFKK-GLGLKIM 347          
BLAST of EY686969 vs. ExPASy Swiss-Prot
Match: DHSO_PONAB (Sorbitol dehydrogenase OS=Pongo abelii GN=SORD PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.301e-19
Identity = 47/106 (44.34%), Postives = 70/106 (66.04%), Query Frame = 1
Query:   31 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 348
            +V+ +C G   ++   + AT +GG + LVG+G    T+PL  AA+REVD+ GVFRY NTWP+ + +L S  ++VKPL+THRF    ++  EAFET  + G  +K+M
Sbjct:  245 EVTIECTGAGASIQAGIYATHSGGTLVLVGLGSEMTTIPLLHAAIREVDIKGVFRYCNTWPVAISMLASKSVNVKPLITHRFPL--EKALEAFETFKK-GLGLKIM 347          
BLAST of EY686969 vs. ExPASy Swiss-Prot
Match: DHSO_BOMMO (Sorbitol dehydrogenase OS=Bombyx mori GN=SDH PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.934e-11
Identity = 40/109 (36.70%), Postives = 60/109 (55.05%), Query Frame = 1
Query:   31 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 357
            DVS D  G       AL  T   G V +VG+    + +PL+ A +REVDVVG FR  NT+   L  + SG I +   +THRF  +  + +EA +  A+ G A+K++ ++
Sbjct:  241 DVSIDACGYGSAQRVALLVTKTAGLVLVVGIADKTVELPLSQALLREVDVVGSFRIMNTYQPALAAVSSGAIPLDKFITHRFPLN--KTKEALDL-AKSGAAMKILIHV 346          
BLAST of EY686969 vs. ExPASy Swiss-Prot
Match: DHSO2_YEAST (Sorbitol dehydrogenase 2 OS=Saccharomyces cerevisiae GN=SOR2 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.138e-11
Identity = 36/112 (32.14%), Postives = 65/112 (58.04%), Query Frame = 1
Query:   19 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYK-NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETS-ARGGTAIKVM 348
            G   DV F+C+G +  +  A+  T  GG +  VGMG +    P+   + +E+ ++G FRY    +   + L+ +GK++VKPL+TH+F F  ++  +A++ + A GG  +K +
Sbjct:  243 GNHADVVFECSGADVCIDAAVKTTKVGGTMVQVGMGKNYTNFPIAEVSGKEMKLIGCFRYSFGDYRDAVNLVATGKVNVKPLITHKFKF--EDAAKAYDYNIAHGGEVVKTI 352          
The following BLAST results are available for this feature:
BLAST of EY686969 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
IDND_VITVI4.300e-5083.93L-idonate 5-dehydrogenase OS=Vitis vinifera GN=GSV... [more]
DHSO_MOUSE9.342e-2146.36Sorbitol dehydrogenase OS=Mus musculus GN=Sord PE=... [more]
DHSO_RAT1.594e-2047.27Sorbitol dehydrogenase OS=Rattus norvegicus GN=Sor... [more]
DHSO_SHEEP2.718e-2046.36Sorbitol dehydrogenase OS=Ovis aries GN=SORD PE=1 ... [more]
DHSO_BOVIN2.718e-2046.36Sorbitol dehydrogenase OS=Bos taurus GN=SORD PE=2 ... [more]
DHSO_HUMAN1.349e-1946.23Sorbitol dehydrogenase OS=Homo sapiens GN=SORD PE=... [more]
DHSO_MACFA1.762e-1945.28Sorbitol dehydrogenase OS=Macaca fascicularis GN=S... [more]
DHSO_PONAB2.301e-1944.34Sorbitol dehydrogenase OS=Pongo abelii GN=SORD PE=... [more]
DHSO_BOMMO3.934e-1136.70Sorbitol dehydrogenase OS=Bombyx mori GN=SDH PE=2 ... [more]
DHSO2_YEAST5.138e-1132.14Sorbitol dehydrogenase 2 OS=Saccharomyces cerevisi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-031-D10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY686969 ID=EY686969; Name=EY686969; organism=Citrus sinensis; type=EST; length=838bp
TGCCCGACCCACGCGTCCGGGACAGGAATAGATGTGAGCTTTGATTGTGC
AGGCCTTAACAAAACCATGTCAACAGCACTGGGCGCCACTTGTGCAGGTG
GTAAAGTTTGCCTCGTGGGGATGGGTCATCATGAAATGACTGTCCCACTC
ACTCCAGCTGCTGTAAGGGAAGTGGATGTGGTGGGGGTGTTTCGCTACAA
GAATACCTGGCCACTGTGTCTGGAGTTGCTTAGAAGCGGAAAGATTGATG
TAAAGCCCCTTGTCACGCACAGGTTTGGTTTCTCCCAGAAAGAAGTGGAA
GAGGCCTTTGAAACAAGTGCTCGTGGTGGTACTGCAATCAAGGTCATGTT
TAATCTGTAAGATACAATGTACTGCAATCAAGGTCATGTTTAATCTGTAC
AATACAACGGCCATGTAAACGTTTGGGCAAACGATTAAATAAAATGGAAT
TGTCGCCGTGTAAACATACGCACACCTGCCCGCCACCTAGTATCTCTTCT
ATAGCGAGCACAAAATACACATCCCTGGGCGGGAAAGTTACACGTCCCTG
GATGGGGGGAGCCTTGCCCAAAACCAAATTAATCACCTTGCGAACGATGC
CCCCTTTCCCCCAGCTGGGGTAACTACCCAAGAATCCCATACCGGAGGCC
CCCTTTATAGCATTGCCGCCACCTGAACGGCACACTGAGATCCCCACTTG
TAACAAACTATTACCCCTCGCCGCCCGTGTCTGCCCCGCCCTAGTAGTGT
GAGAGTCTACAACATTGCCCTCTATCTACAAACCCGTATCGCCGCATGGC
CTCCGTTGCATACCCCCCACCCCCCGGAATTCACGCCG
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