EY686953
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY686953 vs. ExPASy Swiss-Prot
Match: ATL4C_ARATH (Putative RING-H2 finger protein ATL4C OS=Arabidopsis thaliana GN=ATL4C PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.201e-12 Identity = 33/77 (42.86%), Postives = 50/77 (64.94%), Query Frame = 1 Query: 256 RRLDSKVVEALPCFLFSSASSSQC-HGGETCAICLEDYQDGEKLKVLS-CKHEFHASCVDSWLTKWGTFCPVCKHDM 480 R L+ +V+E+ P FL+S + GG CAICL +++D E L+ + C H FHA+C+D WL+ W T CPVC+ ++ Sbjct: 93 RGLEKEVIESFPTFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDVWLSSWST-CPVCRANL 168
BLAST of EY686953 vs. ExPASy Swiss-Prot
Match: RNF13_PONAB (RING finger protein 13 OS=Pongo abelii GN=RNF13 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.568e-12 Identity = 41/131 (31.30%), Postives = 61/131 (46.56%), Query Frame = 1 Query: 148 LMVSVFSLIVVFALFAVAFITPRPWRPWPGQNQPQPRRLDSKVVEALPCFLFSSASSSQCHGGETCAICLEDYQDGEKLKVLSCKHEFHASCVDSWLTKWGTFCPVCKH-----------DMRNNSESNEV 507 L++ LI++ F+ R ++ + RL ++ LP F + CAICL++Y+DG+KL++L C H +H CVD WLTK CPVCK D ++ E NEV Sbjct: 188 LIIVGICLILIVIFMITKFVQDR--------HRARRNRLRKDQLKKLPVHKFKKGDEY-----DVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDSSQEENEV 305
BLAST of EY686953 vs. ExPASy Swiss-Prot
Match: RNF13_HUMAN (RING finger protein 13 OS=Homo sapiens GN=RNF13 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.568e-12 Identity = 41/131 (31.30%), Postives = 61/131 (46.56%), Query Frame = 1 Query: 148 LMVSVFSLIVVFALFAVAFITPRPWRPWPGQNQPQPRRLDSKVVEALPCFLFSSASSSQCHGGETCAICLEDYQDGEKLKVLSCKHEFHASCVDSWLTKWGTFCPVCKH-----------DMRNNSESNEV 507 L++ LI++ F+ R ++ + RL ++ LP F + CAICL++Y+DG+KL++L C H +H CVD WLTK CPVCK D ++ E NEV Sbjct: 188 LIIVGICLILIVIFMITKFVQDR--------HRARRNRLRKDQLKKLPVHKFKKGDEY-----DVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDSSQEENEV 305
BLAST of EY686953 vs. ExPASy Swiss-Prot
Match: RNF13_BOVIN (RING finger protein 13 OS=Bos taurus GN=RNF13 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.568e-12 Identity = 41/131 (31.30%), Postives = 61/131 (46.56%), Query Frame = 1 Query: 148 LMVSVFSLIVVFALFAVAFITPRPWRPWPGQNQPQPRRLDSKVVEALPCFLFSSASSSQCHGGETCAICLEDYQDGEKLKVLSCKHEFHASCVDSWLTKWGTFCPVCKH-----------DMRNNSESNEV 507 L++ LI++ F+ R ++ + RL ++ LP F + CAICL++Y+DG+KL++L C H +H CVD WLTK CPVCK D ++ E NEV Sbjct: 188 LIIVGICLILIVIFMITKFVQDR--------HRARRNRLRKDQLKKLPVHKFKKGDEY-----DVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDSSQEENEV 305
BLAST of EY686953 vs. ExPASy Swiss-Prot
Match: RNF13_RAT (RING finger protein 13 OS=Rattus norvegicus GN=Rnf13 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.048e-12 Identity = 37/108 (34.26%), Postives = 54/108 (50.00%), Query Frame = 1 Query: 148 LMVSVFSLIVVFALFAVAFITPRPWRPWPGQNQPQPRRLDSKVVEALPCFLFSSASSSQCHGGETCAICLEDYQDGEKLKVLSCKHEFHASCVDSWLTKWGTFCPVCK 471 L++ LI++ F+ R ++ + RL ++ LP F + CAICLE+Y+DG+KL++L C H +H CVD WLTK CPVCK Sbjct: 188 LIIVGICLILIVIFMITKFVQDR--------HRNRRNRLRKDQLKKLPVHKFKKGDEY-----DVCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCK 282
BLAST of EY686953 vs. ExPASy Swiss-Prot
Match: RNF13_MOUSE (RING finger protein 13 OS=Mus musculus GN=Rnf13 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.048e-12 Identity = 37/108 (34.26%), Postives = 54/108 (50.00%), Query Frame = 1 Query: 148 LMVSVFSLIVVFALFAVAFITPRPWRPWPGQNQPQPRRLDSKVVEALPCFLFSSASSSQCHGGETCAICLEDYQDGEKLKVLSCKHEFHASCVDSWLTKWGTFCPVCK 471 L++ LI++ F+ R ++ + RL ++ LP F + CAICLE+Y+DG+KL++L C H +H CVD WLTK CPVCK Sbjct: 188 LIIVGICLILIVIFMITKFVQDR--------HRNRRNRLRKDQLKKLPVHKFKKGDEY-----DVCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCK 282
BLAST of EY686953 vs. ExPASy Swiss-Prot
Match: RNF13_CHICK (RING finger protein 13 OS=Gallus gallus GN=RNF13 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.675e-12 Identity = 53/179 (29.61%), Postives = 76/179 (42.46%), Query Frame = 1 Query: 148 LMVSVFSLIVVFALFAVAFITPRPWRPWPGQNQPQPRRLDSKVVEALPCFLFSSASSSQCHGGETCAICLEDYQDGEKLKVLSCKHEFHASCVDSWLTKWGTFCPVCKH-----------DMRNNSESNEVKRGN*ALKSVD*DDNLASIWNQGSFHVVGMCFELHGIFNF--SSTYPE 645 L++ LI++ F+ R ++ + RL ++ LP F + CAICL++Y+DG+KL++L C H +H CVD WLTK CPVCK + ++ E NEV L+ LAS+ Q G E H N SS Y E Sbjct: 188 LIIVGICLILIVIFMITKFVQDR--------HRARRNRLRKDQLKKLPVHKFKKGDEY-----DVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSETDSSQEENEVSENTPLLRP------LASVSTQS----FGALSESHSHQNMTESSEYEE 343
BLAST of EY686953 vs. ExPASy Swiss-Prot
Match: ATL2G_ARATH (RING-H2 finger protein ATL2G OS=Arabidopsis thaliana GN=ATL2G PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.016e-11 Identity = 33/85 (38.82%), Postives = 54/85 (63.53%), Query Frame = 1 Query: 256 RRLDSKVVEALPCFLFSSASSSQC-HGGETCAICLEDYQDGEKLKVLS-CKHEFHASCVDSWLTKWGTFCPVCKHDMRNNSESNE 504 R LD++ +E P FL+S + + GG CA+CL +++D E L+++ C H FHA CVD WL++ T CP+C+ D+ N + ++ Sbjct: 105 RGLDAEAIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEHST-CPLCRADLVLNQQGDD 188
BLAST of EY686953 vs. ExPASy Swiss-Prot
Match: RN167_MOUSE (E3 ubiquitin-protein ligase RNF167 OS=Mus musculus GN=Rnf167 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.327e-11 Identity = 29/68 (42.65%), Postives = 42/68 (61.76%), Query Frame = 1 Query: 337 ETCAICLEDYQDGEKLKVLSCKHEFHASCVDSWLTKWGTFCPVCKH-------DMRNNSESNEVKRGN 519 + CAICL++Y+DG+KL+VL C H +H+ CVD WLT+ CP+CK D E+ E + G+ Sbjct: 228 DVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRGPGDEEQEEETQEQEEGD 295
BLAST of EY686953 vs. ExPASy Swiss-Prot
Match: ATL1N_ARATH (RING-H2 finger protein ATL1N OS=Arabidopsis thaliana GN=ATL1N PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.327e-11 Identity = 37/124 (29.84%), Postives = 68/124 (54.84%), Query Frame = 1 Query: 145 VLMVSVFSLIVVFALF---------AVAFITPRPWRPWPGQNQPQPRRLDSKVVEALPCFLFSSASSSQCHGGET--CAICLEDYQDGEKLKVL-SCKHEFHASCVDSWLTKWGTFCPVCKHDM 480 +++VSVF + F+++ + + P W N+ Q R LD+ ++E P F +S+ + + G E C++CL +++D E L+++ C H FH C+D+WL + T CP+C+ D+ Sbjct: 68 IVLVSVFFFLGFFSVYIRRCLERVMGMDYGNPNDAGNWLATNRQQARGLDASIIETFPTFQYSTVKTLRI-GKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWL-RSHTTCPLCRADL 189 The following BLAST results are available for this feature:
BLAST of EY686953 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >EY686953 ID=EY686953; Name=EY686953; organism=Citrus sinensis; type=EST; length=828bpback to top |