EY710868

Overview
NameEY710868
Unique NameEY710868
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDHC_MAIZE (Malate dehydrogenase, cytoplasmic OS=Zea mays PE=2 SV=2)

HSP 1 Score: 291.197 bits (744), Expect = 5.031e-78
Identity = 162/229 (70.74%), Postives = 174/229 (75.98%), Query Frame = 3
Query:   57 MAKEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F*KNLRHQSLLRNY-MLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVNTATGENLSMSLSGLCIVEW---RFITT 731
            MAKEP+RVLVTGAA QIGYALVPMIARGVMLG DQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGV ATTD VEACTGVN+AVMVGGFPRK+GM+RKDVMSKNVSIYK+ ASALE HAAPNCKVLVVANPAN      K        +N   L ++   + +G         VSD KNVIIWGNHSSSQYPDVN  TV T+TGE     L  +   EW    FITT
Sbjct:    1 MAKEPMRVLVTGAAGQIGYALVPMIARGVMLGADQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDVVEACTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEAHAAPNCKVLVVANPANTNALILKEFAPSIPEKNVTCLTRLDHNRALGQISERLNVQVSDVKNVIIWGNHSSSQYPDVNHATVKTSTGEKPVREL--VSDDEWLNGEFITT 227          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDHC1_ARATH (Malate dehydrogenase, cytoplasmic 1 OS=Arabidopsis thaliana GN=At1g04410 PE=1 SV=2)

HSP 1 Score: 289.656 bits (740), Expect = 1.464e-77
Identity = 152/207 (73.43%), Postives = 166/207 (80.19%), Query Frame = 3
Query:   57 MAKEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F*KNLRHQSLLRNY-MLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVNTATGE 674
            MAKEPVRVLVTGAA QIGYALVPMIARG+MLG DQPVILHMLDIPPAAEALNGVKMEL+DAAFPLLKGV ATTDAVE CTGVN+AVMVGGFPRK+GM+RKDVMSKNVSIYK+ A+ALE HAAPNCKVLVVANPAN      K        +N   L ++   + +G        PVSD KNVIIWGNHSSSQYPDVN   V T++GE
Sbjct:    1 MAKEPVRVLVTGAAGQIGYALVPMIARGIMLGADQPVILHMLDIPPAAEALNGVKMELIDAAFPLLKGVVATTDAVEGCTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQAAALEKHAAPNCKVLVVANPANTNALILKEFAPSIPEKNISCLTRLDHNRALGQISERLSVPVSDVKNVIIWGNHSSSQYPDVNHAKVQTSSGE 207          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDHC2_ARATH (Malate dehydrogenase, cytoplasmic 2 OS=Arabidopsis thaliana GN=At5g43330 PE=2 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 1.912e-77
Identity = 154/207 (74.40%), Postives = 166/207 (80.19%), Query Frame = 3
Query:   57 MAKEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F*KNLRHQSLLRNY-MLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVNTATGE 674
            MAKEPVRVLVTGAA QIGYALVPMIARG+MLG DQPVILHMLDIP AAEALNGVKMELVDAAFPLLKGV ATTDAVEACTGVN+AVMVGGFPRK+GM+RKDVMSKNVSIYK+ ASALE HAAPNCKVLVVANPAN      K        +N   L ++   + +G        PVSD KNVIIWGNHSS+QYPDVN  TV T+ GE
Sbjct:    1 MAKEPVRVLVTGAAGQIGYALVPMIARGIMLGADQPVILHMLDIPFAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPEKNITCLTRLDHNRALGQVSERLSVPVSDVKNVIIWGNHSSTQYPDVNHATVKTSVGE 207          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDHC_MEDSA (Malate dehydrogenase, cytoplasmic OS=Medicago sativa GN=CMDH PE=2 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 1.049e-75
Identity = 153/207 (73.91%), Postives = 163/207 (78.74%), Query Frame = 3
Query:   57 MAKEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F*KNLRHQSLLRNY-MLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVNTATGE 674
            MAK+PVRVLVTGAA QIGYALVPMIARGVMLG DQPVILHMLDI PAAE+LNGVKMELVDAAFPLLKGV ATTD VEACTGVNIAVMVGGFPRK+GM+RKDVMSKNVSIYK+ ASALE HAA NCKVLVVANPAN      K        RN   L ++   + +G         VSD KNVIIWGNHSS+QYPDVN  TVNT  GE
Sbjct:    1 MAKDPVRVLVTGAAGQIGYALVPMIARGVMLGPDQPVILHMLDIAPAAESLNGVKMELVDAAFPLLKGVVATTDVVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKHAAANCKVLVVANPANTNALILKEFAPSIPERNISCLTRLDHNRALGQISERLNVQVSDVKNVIIWGNHSSTQYPDVNHATVNTPAGE 207          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDHC_ORYSJ (Malate dehydrogenase, cytoplasmic OS=Oryza sativa subsp. japonica GN=Os10g0478200 PE=1 SV=3)

HSP 1 Score: 280.796 bits (717), Expect = 6.800e-75
Identity = 147/207 (71.01%), Postives = 164/207 (79.23%), Query Frame = 3
Query:   57 MAKEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F*KNLRHQSLLRNY-MLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVNTATGE 674
            MAKEP+RVLVTGAA QIGYALVPMIARGVMLG DQPVILHMLDIPPA E+LNG+KMELVDAAFPLLKG+ ATTD VEACTGVN+AVMVGGFPRK+GM+RKDVMSKNVSIYK+ ASALE HAAPNCKVLVVANPAN      K        +N   L ++   + +G    +    V+D KN IIWGNHSS+QYPDVN  TV T +GE
Sbjct:    1 MAKEPMRVLVTGAAGQIGYALVPMIARGVMLGADQPVILHMLDIPPATESLNGLKMELVDAAFPLLKGIVATTDVVEACTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEAHAAPNCKVLVVANPANTNALILKEFAPSIPEKNITCLTRLDHNRALGQISEKLNVQVTDVKNAIIWGNHSSTQYPDVNHATVKTPSGE 207          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDHC_BETVU (Malate dehydrogenase, cytoplasmic OS=Beta vulgaris GN=NR1 PE=1 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 8.880e-75
Identity = 149/207 (71.98%), Postives = 162/207 (78.26%), Query Frame = 3
Query:   57 MAKEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F*KNLRHQSLLRNY-MLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVNTATGE 674
            MA EP+RVLVTGAA QIGYALVPMIARGVMLG +QPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGV ATTD  EAC GVN+AVMVGGFPRK+GM+RKDVM KNVSIYK+ ASALE +AAPNCKVLVVANPAN      K        +N   L ++   + +G         VSD KNVIIWGNHSSSQYPDVN CTV T +GE
Sbjct:    1 MAVEPLRVLVTGAAGQIGYALVPMIARGVMLGANQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDVAEACKGVNVAVMVGGFPRKEGMERKDVMPKNVSIYKSQASALEQYAAPNCKVLVVANPANTNALILKEFAPSIPEKNITCLTRLDHNRALGQISERLNAQVSDVKNVIIWGNHSSSQYPDVNPCTVKTGSGE 207          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDHC_MESCR (Malate dehydrogenase, cytoplasmic OS=Mesembryanthemum crystallinum GN=MDH PE=2 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 5.756e-74
Identity = 148/203 (72.91%), Postives = 160/203 (78.82%), Query Frame = 3
Query:   57 MAKEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F*KNLRHQSLLRNY-MLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVNT 662
            MA EP+RVLVTGAA QIGYALVPMIARG+MLG +QPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGV ATTDA EAC GVN+AVMVGGFPRK+GM+RKDVMSKNVSIYKA ASALE HAAPNCKVLVVANPAN      K        +N   L ++   + +G         VSD KNVIIWGNHSS+QYPDVN  TV T
Sbjct:    1 MAVEPLRVLVTGAAGQIGYALVPMIARGIMLGANQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAAEACKGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPEKNISCLTRLDHNRALGQISERLNVQVSDVKNVIIWGNHSSTQYPDVNHATVKT 203          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_PSYWF (Malate dehydrogenase OS=Psychrobacter sp. (strain PRwf-1) GN=mdh PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.448e-42
Identity = 97/200 (48.50%), Postives = 125/200 (62.50%), Query Frame = 3
Query:   63 KEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F*KNLRHQSLLRNY-MLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVN 659
            K+PVRV VTGAA  I YA++  IA G MLG DQPVIL +L+I PA +AL GV MEL D AFPLL GV  T DA  A    + A++VG  PR  GM+RKD++  N +I+ A   AL   A+ + KVLVV NPAN      +        RN+  + ++   +G+     ET   V+D K +IIWGNHSS+QYPD+ +CTVN
Sbjct:    2 KQPVRVAVTGAAGNISYAMLFRIASGEMLGKDQPVILQLLEITPALDALKGVVMELEDCAFPLLAGVVQTDDATVAFKDADYALLVGARPRGPGMERKDLLEANAAIFSAQGKALNEVASRDVKVLVVGNPANTNALIAQRNAPDLDPRNFTAMTRLDHNRGMAQLAEETNSTVNDVKKMIIWGNHSSTQYPDLTECTVN 201          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_PSYCK (Malate dehydrogenase OS=Psychrobacter cryohalolentis (strain K5) GN=mdh PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 5.438e-40
Identity = 95/200 (47.50%), Postives = 124/200 (62.00%), Query Frame = 3
Query:   63 KEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F*KNLRHQSLLRNY-MLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVN 659
            K+PVRV VTGAA  I YA++  IA G MLG DQPVIL +L+I PA +AL GV MEL D AFPLL GV  T DA  A   V+ A++VG  PR  GM+RKD++  N +I+ A   AL   A+ + KVLVV NPAN      +        RN+  + ++   + +     +T+  V+D K +IIWGNHSS+QYPD+   TVN
Sbjct:    4 KQPVRVAVTGAAGNISYAMLFRIASGEMLGKDQPVILQLLEIAPALDALKGVVMELEDCAFPLLAGVVQTDDATVAFKDVDYALLVGSRPRGPGMERKDLLEANAAIFSAQGKALNDVASRDVKVLVVGNPANTNAVIAQRNAPDLDPRNFTAMTRLDHNRAMAQLAGKTDSTVNDVKKMIIWGNHSSTQYPDLTASTVN 203          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_PSYA2 (Malate dehydrogenase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=mdh PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 7.102e-40
Identity = 94/200 (47.00%), Postives = 124/200 (62.00%), Query Frame = 3
Query:   63 KEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F*KNLRHQSLLRNY-MLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVN 659
            K+PVRV VTGAA  I YA++  IA G MLG DQPVIL +L+I PA +AL GV MEL D AFPLL G+  T DA  A   V+ A++VG  PR  GM+RKD++  N +I+ A   AL   A+ + KVLVV NPAN      +        RN+  + ++   + +     +T+  V+D K +IIWGNHSS+QYPD+   TVN
Sbjct:    4 KQPVRVAVTGAAGNISYAMLFRIASGEMLGKDQPVILQLLEIAPALDALKGVVMELEDCAFPLLAGIVQTDDATVAFKDVDYALLVGSRPRGPGMERKDLLEANAAIFSAQGKALNDVASRDVKVLVVGNPANTNALIAQRNAPDLDPRNFTAMTRLDHNRAMAQLAGKTDSTVNDVKKMIIWGNHSSTQYPDLTASTVN 203          
The following BLAST results are available for this feature:
BLAST of EY710868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 187
Match NameE-valueIdentityDescription
MDHC_MAIZE5.031e-7870.74Malate dehydrogenase, cytoplasmic OS=Zea mays PE=2... [more]
MDHC1_ARATH1.464e-7773.43Malate dehydrogenase, cytoplasmic 1 OS=Arabidopsis... [more]
MDHC2_ARATH1.912e-7774.40Malate dehydrogenase, cytoplasmic 2 OS=Arabidopsis... [more]
MDHC_MEDSA1.049e-7573.91Malate dehydrogenase, cytoplasmic OS=Medicago sati... [more]
MDHC_ORYSJ6.800e-7571.01Malate dehydrogenase, cytoplasmic OS=Oryza sativa ... [more]
MDHC_BETVU8.880e-7571.98Malate dehydrogenase, cytoplasmic OS=Beta vulgaris... [more]
MDHC_MESCR5.756e-7472.91Malate dehydrogenase, cytoplasmic OS=Mesembryanthe... [more]
MDH_PSYWF4.448e-4248.50Malate dehydrogenase OS=Psychrobacter sp. (strain ... [more]
MDH_PSYCK5.438e-4047.50Malate dehydrogenase OS=Psychrobacter cryohalolent... [more]
MDH_PSYA27.102e-4047.00Malate dehydrogenase OS=Psychrobacter arcticus (st... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-001-B06-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710868 ID=EY710868; Name=EY710868; organism=Citrus sinensis; type=EST; length=862bp
CCACGCGTCCGGGAAAAATCTTTTCGTTTCCTGTGATACATCTCTGATCC
GAACTAATGGCCAAGGAACCAGTTCGCGTTCTCGTCACCGGCGCCGCAAG
GCAAATTGGATATGCACTTGTCCCCATGATTGCTAGGGGAGTGATGTTGG
GTACTGACCAGCCTGTGATTCTGCACATGCTTGATATCCCACCTGCAGCA
GAGGCATTGAATGGTGTGAAGATGGAGTTGGTTGATGCTGCATTCCCTCT
TCTTAAAGGTGTTGATGCTACAACTGATGCTGTTGAGGCATGCACTGGGG
TCAATATTGCCGTTATGGTTGGTGGCTTTCCAAGAAAACAAGGAATGGAT
AGAAAAGATGTGATGTCAAAGAACGTTTCAATCTACAAGGCTCATGCTTC
TGCCCTGGAGCATCACGCAGCTCCGAACTGCAAGGTTCTAGTTGTCGCTA
ACCCTGCAAACCCAATGCATTGATTCTGAAAGAATTTGCGCCATCAATCC
CTGCTAAGAAATTACATGCTTGACCAGATTGGATCATAACAGGGCATTGG
GACAAATATCTGAGAAACTGAATGTCCAGTATCTGATGCTAAGAATGTGA
TTATTTGGGGAAATCATTCATCATCTCAGTACCCTGATGTCAACCAGTGC
ACTGTCAATACTGCCACTGGGGAAAACCTGTCCATGAGCTTGTCAGGATT
ATGCATCGTTGAATGGAGATTCATAACCACAGCCAACAACGTGGTGCTGC
ATCATCAACTCCAAAAGCTCCCAAGGGTCTGCTGCTGCAATTCCGCTTTG
ACCTACCCGGATTGGGTTCTTGAACCCTTAGGACCTGGGCCCCAGGGGGT
TACCTGATGGTC
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