EY685151

Overview
NameEY685151
Unique NameEY685151
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length974
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY685151_ssr475 microsatellite EY685151_ssr475:475..489. BLAST: Citrus ESTs to Prunus persica proteins V1
EY685151_ssr504 microsatellite EY685151_ssr504:504..518. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY685151 vs. ExPASy Swiss-Prot
Match: GRXC6_ARATH (Glutaredoxin-C6 OS=Arabidopsis thaliana GN=GRXC6 PE=2 SV=2)

HSP 1 Score: 187.963 bits (476), Expect = 7.273e-47
Identity = 98/138 (71.01%), Postives = 111/138 (80.43%), Query Frame = 1
Query:   40 GLRRYPNDVVHLDLTPPSST--TNLSIDGEESSEARIQRLISEHPVIIFSRSSCCMCHVMKTLFATIGVHPTVIELDDHEISALPLVDHDESAHADSPRNPAPAPAVFIGGTCVGGLESLVALHIGGHLVPKLVEIGA 447
            GL+R+ NDVV LDLTPPS T  T+LSID EES+EA+I+RLISEHPVIIFSRSSCCMCHVMK L ATIGV PTVIELDDHE+S+LP    DE  ++       P PAVFIG  CVGGLESLVALH+ G LVPKLV++GA
Sbjct:    6 GLQRFSNDVVRLDLTPPSQTSSTSLSIDEEESTEAKIRRLISEHPVIIFSRSSCCMCHVMKRLLATIGVIPTVIELDDHEVSSLPTALQDE--YSGGVSVVGPPPAVFIGRECVGGLESLVALHLSGQLVPKLVQVGA 141          
BLAST of EY685151 vs. ExPASy Swiss-Prot
Match: GRC10_ARATH (Glutaredoxin-C10 OS=Arabidopsis thaliana GN=GRXC10 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 9.852e-36
Identity = 85/157 (54.14%), Postives = 104/157 (66.24%), Query Frame = 1
Query:   34 MQGLRRYPNDVVHLDLT----------PPS--------STTNLSIDGEESSEARIQRLISEHPVIIFSR-SSCCMCHVMKTLFATIGVHPTVIELDDHEISALPLVDHDESAHADSPRNPAPAPAVFIGGTCVGGLESLVALHIGGHLVPKLVEIGA 447
            M+GLR   ND V LDLT          PP+        ++T+LS D EE+SE++I RLISEHPVIIF+R SSCCMCHVMK L +T+GVHPTVIE+DD EI+ L +                 AP +FIGGTCVGG ESLVALH+ G L+P+LVE+GA
Sbjct:    4 MRGLRNCSNDAVTLDLTVHPPPPPPLPPPAPSTVSSSTASTSLSFDEEETSESKIGRLISEHPVIIFTRFSSCCMCHVMKKLLSTVGVHPTVIEIDDGEIAYLAV---------------EAAPVLFIGGTCVGGFESLVALHLSGQLIPRLVEVGA 145          
BLAST of EY685151 vs. ExPASy Swiss-Prot
Match: GRXC7_ORYSJ (Glutaredoxin-C7 OS=Oryza sativa subsp. japonica GN=GRXC7 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 4.019e-21
Identity = 54/110 (49.09%), Postives = 69/110 (62.73%), Query Frame = 1
Query:  118 GEESSEARIQRLISEHPVIIFSRSSCCMCHVMKTLFATIGVHPTVIELDDHEISALPLVDHDESAHADSPRNPAPAPAVFIGGTCVGGLESLVALHIGGHLVPKLVEIGA 447
            GE+ +E RI RL+ E PV+IF+R  CCMCHVM+ L A +G H TVIELD+    A           A S    A  PA+F+GG  VGGL+ L+ LH+ G LVP+L E+GA
Sbjct:   38 GEQPAE-RIGRLVRESPVVIFARRGCCMCHVMRRLLAAVGAHATVIELDEAAEEA-----------AASAAAAAAVPALFVGGAPVGGLDGLMGLHLSGRLVPRLREVGA 135          
BLAST of EY685151 vs. ExPASy Swiss-Prot
Match: GRXC3_ORYSJ (Glutaredoxin-C3 OS=Oryza sativa subsp. japonica GN=GRXC3 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.205e-19
Identity = 55/114 (48.25%), Postives = 70/114 (61.40%), Query Frame = 1
Query:  124 ESSEARIQRLISEHPVIIFSRSSCCMCHVMKTLFATIGVHPTVIELD------DHEISALPLVDHDESAHADSPRNPAPAPAVFIGGTCVGGLESLVALHIGGHLVPKLVEIGA 447
            ES+ AR++RL SE  V++FS SSCCMCH +K LF  +GVHPTV ELD      + E +   LV +   A A    +P   P VFIGG  VG ++ ++A HI G LVP L E GA
Sbjct:   23 ESAVARVERLASESAVVVFSVSSCCMCHAVKRLFCGMGVHPTVHELDLDPRGRELERALARLVGYGGPAAA----SPPVVPVVFIGGKLVGAMDRVMAAHINGSLVPLLKEAGA 132          
BLAST of EY685151 vs. ExPASy Swiss-Prot
Match: GRXS2_ORYSJ (Monothiol glutaredoxin-S2 OS=Oryza sativa subsp. japonica GN=GRXS2 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 3.184e-18
Identity = 53/118 (44.92%), Postives = 73/118 (61.86%), Query Frame = 1
Query:  103 NLSID--GEESSEA-RIQRLISEHPVIIFSRSSCCMCHVMKTLFATIGVHPTVIELDDHEISALPLVDHDESAHADSPRNPAPAPAVFIGGTCVGGLESLVALHIGGHLVPKLVEIGA 447
            +L+ID  GEE + A R+ RL+ E PV++F+R  C M HVM+ L A +G H TVIEL+          + +E+A        A  PA+F+GG  VGGLE L+ LH+ G LVP+L E+GA
Sbjct:   15 SLTIDPAGEEEAPAERVGRLVRESPVVVFARRGCYMAHVMRRLLAAVGAHATVIELEG------GAAEEEEAALGGG----AALPALFVGGDPVGGLEGLMGLHLSGRLVPRLREVGA 122          
BLAST of EY685151 vs. ExPASy Swiss-Prot
Match: GRXC5_ORYSJ (Putative glutaredoxin-C5 OS=Oryza sativa subsp. japonica GN=GRXC5 PE=3 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 2.696e-17
Identity = 52/114 (45.61%), Postives = 66/114 (57.89%), Query Frame = 1
Query:  124 ESSEARIQRLISEHPVIIFSRSSCCMCHVMKTLFATIGVHPTVIELD------DHEISALPLVDHDESAHADSPRNPAPAPAVFIGGTCVGGLESLVALHIGGHLVPKLVEIGA 447
            E++  R++RL SE  V++FS SSCCMCH +K LF  +GVHP V ELD      D E +   LV    +A        A  P VFIGG  VG ++ ++A HI G LVP L E GA
Sbjct:   26 ETAAERVERLASESAVVVFSVSSCCMCHAVKRLFCGMGVHPAVHELDLDPRGRDLERALARLVGAGGAA-------AAAVPVVFIGGKLVGAMDRVMAAHINGSLVPLLKEAGA 132          
BLAST of EY685151 vs. ExPASy Swiss-Prot
Match: GRXC1_ORYSJ (Glutaredoxin-C1 OS=Oryza sativa subsp. japonica GN=GRXC1.1 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.338e-16
Identity = 46/103 (44.66%), Postives = 61/103 (59.22%), Query Frame = 1
Query:  139 RIQRLISEHPVIIFSRSSCCMCHVMKTLFATIGVHPTVIELDDHEISALPLVDHDESAHADSPRNPAPAPAVFIGGTCVGGLESLVALHIGGHLVPKLVEIGA 447
            R+ RL ++  V+IFS SSCCMCH +  LF  +GV+PTV+ELD+      P     E A A         PAVFIGG  VG  + +++LH+ G+LVP L   GA
Sbjct:    3 RVNRLAAQRAVVIFSMSSCCMCHTVTRLFCELGVNPTVVELDED-----PRGKEMEKALARLLGRSPAVPAVFIGGRLVGSTDKVMSLHLSGNLVPLLRNAGA 100          
BLAST of EY685151 vs. ExPASy Swiss-Prot
Match: GRXS3_ARATH (Monothiol glutaredoxin-S3 OS=Arabidopsis thaliana GN=GRXS3 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.747e-16
Identity = 47/102 (46.08%), Postives = 64/102 (62.75%), Query Frame = 1
Query:  142 IQRLISEHPVIIFSRSSCCMCHVMKTLFATIGVHPTVIELDDHEISALPLVDHDESAHADSPRNPAPAPAVFIGGTCVGGLESLVALHIGGHLVPKLVEIGA 447
            +Q++ISE  V+IFS++SCCM H +KTLF  +GV+PT+ ELD  EIS    ++H  +    SP      P VFIGG  VGG   +++LH+   LVP L   GA
Sbjct:    4 LQKMISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELD--EISRGKEIEHALAQLGCSP----TVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGA 99          
BLAST of EY685151 vs. ExPASy Swiss-Prot
Match: GRXC9_ORYSJ (Glutaredoxin-C9 OS=Oryza sativa subsp. japonica GN=GRXC9 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 5.084e-16
Identity = 47/119 (39.50%), Postives = 67/119 (56.30%), Query Frame = 1
Query:  109 SIDGEESSEA------RIQRLISEHPVIIFSRSSCCMCHVMKTLFATIGVHPTVIELDDHEISALPLVDHDESAHADSPRNPAPAPAVFIGGTCVGGLESLVALHIGGHLVPKLVEIGA 447
            +++ EE++ A      R+ R+ S + V++FS S CCMCHV+K L   +GV P V ELD    +A    D   +     P    P P VF+GG  +GG+E ++A HI G LVP L + GA
Sbjct:   75 AVEEEEAAAAMMSVYERVARMASGNAVVVFSASGCCMCHVVKRLLLGLGVGPAVYELDQLAAAA----DIQAALSQLLPPGQPPVPVVFVGGRLLGGVEKVMACHINGTLVPLLKQAGA 189          
BLAST of EY685151 vs. ExPASy Swiss-Prot
Match: GRXS8_ARATH (Monothiol glutaredoxin-S8 OS=Arabidopsis thaliana GN=GRXS8 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.132e-15
Identity = 45/103 (43.69%), Postives = 64/103 (62.14%), Query Frame = 1
Query:  139 RIQRLISEHPVIIFSRSSCCMCHVMKTLFATIGVHPTVIELDDHEISALPLVDHDESAHADSPRNPAPAPAVFIGGTCVGGLESLVALHIGGHLVPKLVEIGA 447
            +IQ++ISE  V+IFS +SCCM H +KTLF  +GV+PT+ ELD  EI+    +++  +    SP      P VFIGG  VGG   +++LH+   L+P L   GA
Sbjct:    3 KIQKMISEKSVVIFSNNSCCMSHTIKTLFLDLGVNPTIYELD--EINRGKEIEYALAQLGCSP----TVPVVFIGGQLVGGANQVMSLHLNRSLIPMLKRFGA 99          
The following BLAST results are available for this feature:
BLAST of EY685151 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
GRXC6_ARATH7.273e-4771.01Glutaredoxin-C6 OS=Arabidopsis thaliana GN=GRXC6 P... [more]
GRC10_ARATH9.852e-3654.14Glutaredoxin-C10 OS=Arabidopsis thaliana GN=GRXC10... [more]
GRXC7_ORYSJ4.019e-2149.09Glutaredoxin-C7 OS=Oryza sativa subsp. japonica GN... [more]
GRXC3_ORYSJ2.205e-1948.25Glutaredoxin-C3 OS=Oryza sativa subsp. japonica GN... [more]
GRXS2_ORYSJ3.184e-1844.92Monothiol glutaredoxin-S2 OS=Oryza sativa subsp. j... [more]
GRXC5_ORYSJ2.696e-1745.61Putative glutaredoxin-C5 OS=Oryza sativa subsp. ja... [more]
GRXC1_ORYSJ1.338e-1644.66Glutaredoxin-C1 OS=Oryza sativa subsp. japonica GN... [more]
GRXS3_ARATH1.747e-1646.08Monothiol glutaredoxin-S3 OS=Arabidopsis thaliana ... [more]
GRXC9_ORYSJ5.084e-1639.50Glutaredoxin-C9 OS=Oryza sativa subsp. japonica GN... [more]
GRXS8_ARATH1.132e-1543.69Monothiol glutaredoxin-S8 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-010-D07-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685151 ID=EY685151; Name=EY685151; organism=Citrus sinensis; type=EST; length=974bp
CAAGAATCTGTTTCTACTTTCTATAGAGAGGAGATGCAAGGCCTAAGGCG
TTACCCAAACGACGTCGTCCACCTCGACCTCACCCCTCCCTCGTCAACCA
CTAACTTGTCCATCGACGGTGAAGAATCCTCGGAGGCAAGAATCCAACGC
CTGATATCCGAGCACCCGGTGATAATATTCAGCCGGTCGTCTTGCTGCAT
GTGCCACGTCATGAAAACGCTCTTCGCCACCATCGGGGTGCACCCTACCG
TCATCGAGCTCGATGATCACGAGATCTCAGCCCTCCCTCTTGTTGACCAT
GATGAGAGCGCTCACGCCGACTCCCCTCGTAATCCGGCGCCGGCGCCCGC
AGTCTTCATCGGCGGCACGTGCGTCGGTGGCCTCGAGTCCCTCGTCGCCC
TCCACATCGGCGGCCACCTCGTGCCCAAGCTTGTAGAAATTGGCGCTCTC
TGGGTATGATAATTATTAGTTACTTTATTATTATTATTACTATAATATAT
CAAAATAATAATAATAATAAATCTATTATTACTACTATTATTATTAGTAG
AATTAGAAAGGCACCCAATTCTGATTCTTATATATGTTATGTTAATTACT
TAGTTTGGGTTCTTAATTACTCCAGTGTTCTTTTAGGGTCTCTCTTTTCT
TATTGGAAGTGAACTTAAACTTTAGGAGATCAAAGGGAAAACAAAAAAAA
AAAAAAACTAAACCTTCTTTCCCTTTGGATGAATTGAGGAGGGGGCGGTT
AAAGAGAGTATGAGTTTGGAATACCTCGGAGAAAGGGCACAGCATACACG
CTATACATGCAACGCCCTAAATCCCAGCCCGACGGCCAGCCTGTTATCCT
AACCCTCCAGGATGGCGGGCGCCCCGTATCTCCCCAAAAACCAACAACAA
GCTCCAACAAACATATACAACACCAAGAATAAACACCAAAAAAAAAACAT
GCATGAACGTAACGAACACATAAC
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