EY684687
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684687 vs. ExPASy Swiss-Prot
Match: CHIP_ARATH (E3 ubiquitin-protein ligase CHIP OS=Arabidopsis thaliana GN=CHIP PE=1 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 6.287e-63 Identity = 116/201 (57.71%), Postives = 151/201 (75.12%), Query Frame = 2 Query: 14 ETIQLDHDSVKGHYLLGQTLLQRNEYADGIKELEKALNLGRGAKPKGYIVEDIWQELARAKYLLWEQESSKRSWELQSXXXXXXXXXXXXHVLDISRKEGFLDEASSTHLKQMEALRQVFRKAAEDDTPAEVPDYLCCKITLDIFRDPVITPSGVTYERAVILDHLDKVGKFDPITREPLRESQLVPNLAIKETNSSIYEQ 616 + IQL H+SVK HY+LG LLQ+ E+ +G+KEL++AL+LGR + P GY+VE+IW+EL++AKY+ WE S+ RSWEL S LD+SR E DEA + H ++++AL +VF+KAAE+D P EVPDYLCC ITL+IFRDPVI+PSGVTYERA IL+HL KVGKFDPITRE + + LVPNLAIKE ++ E+ Sbjct: 69 KAIQLVHNSVKAHYMLGLALLQKKEFTNGVKELQRALDLGRCSNPTGYMVEEIWEELSKAKYMEWELVSAMRSWELNSLKETCEAALNQQRALDMSRTEESSDEAYTAHTERLKALERVFKKAAEEDKPTEVPDYLCCNITLEIFRDPVISPSGVTYERAAILEHLKKVGKFDPITREKIDPANLVPNLAIKEAVAAYLEK 269
BLAST of EY684687 vs. ExPASy Swiss-Prot
Match: STUB1_MOUSE (STIP1 homology and U box-containing protein 1 OS=Mus musculus GN=Stub1 PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.759e-26 Identity = 74/216 (34.26%), Postives = 111/216 (51.39%), Query Frame = 2 Query: 20 IQLDHDSVKGHYLLGQTLLQRNEYADGIKELEKALNLGRGAKPKGYIVEDIWQELARAKYLLWEQESSKR---SWELQSXXXXXXXXXXXXHVLDISRK-EGFLDEA---------SSTHLKQMEALRQVFRKAAEDDTPAEVPDYLCCKITLDIFRDPVITPSGVTYERAVILDHLDKVGKFDPITREPLRESQLVPNLAIKET-NSSIYEQTWL 625 ++LD SVK H+ LGQ L+ Y + I L++A +L + + +DI L AK W +R EL S + + R EG D+ + H K M + ++F + E ++PDYLC KI+ ++ R+P ITPSG+TY+R I +HL +VG FDP+TR PL + QL+PNLA+KE ++ I E W+ Sbjct: 88 LELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLN--FGDDIPSALRIAKKKRWNSIEERRIHQESELHSYLTRLIAAERERELEECQRNHEGHEDDGHIRAQQACIEAKHDKYMADMDELFSQVDEKRKKRDIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQEQLIPNLAMKEVIDAFISENGWV 301
BLAST of EY684687 vs. ExPASy Swiss-Prot
Match: STUB1_CHICK (STIP1 homology and U box-containing protein 1 OS=Gallus gallus GN=STUB1 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.759e-26 Identity = 73/220 (33.18%), Postives = 115/220 (52.27%), Query Frame = 2 Query: 11 EETIQLDHDSVKGHYLLGQTLLQRNEYADGIKELEKALNLGRGAKPKGYIVEDIWQELARAKYLLWEQESSKR---SWELQSXXXXXXXXXXXXHVLDI--SRKEGFLDEA---------SSTHLKQMEALRQVFRKAAEDDTPAEVPDYLCCKITLDIFRDPVITPSGVTYERAVILDHLDKVGKFDPITREPLRESQLVPNLAIKET-NSSIYEQTWL 625 + ++LD SVK H+ LGQ ++ Y + I L++A NL + + +DI L AK W KR EL S + + +++E +DE+ + H K + + ++F + E ++PDYLC KI+ ++ R+P ITPSG+TY+R I +HL +VG FDP+TR PL + QL+PNLA+KE ++ I E W+ Sbjct: 94 KRALELDGQSVKAHFFLGQCQMEMENYDEAIANLQRAYNLAKEQRLN--FGDDIPSALRIAKKKRWNSIEEKRINQENELHSYLTRLIMAEKERELAECRKAQQEENVDESRGRVQLAGIEAKHDKYLADMDELFSQVDEKRKKRDIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQDQLIPNLAMKEVIDAFISENGWV 311
BLAST of EY684687 vs. ExPASy Swiss-Prot
Match: STUB1_HUMAN (STIP1 homology and U box-containing protein 1 OS=Homo sapiens GN=STUB1 PE=1 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 3.603e-26 Identity = 74/216 (34.26%), Postives = 112/216 (51.85%), Query Frame = 2 Query: 20 IQLDHDSVKGHYLLGQTLLQRNEYADGIKELEKALNLGRGAKPKGYIVEDIWQELARAKYLLWEQESSKR---SWELQSXXXXXXXXXXXXHVLDISRK-EGFLDEA---------SSTHLKQMEALRQVFRKAAEDDTPAEVPDYLCCKITLDIFRDPVITPSGVTYERAVILDHLDKVGKFDPITREPLRESQLVPNLAIKET-NSSIYEQTWL 625 ++LD SVK H+ LGQ L+ Y + I L++A +L + + +DI L AK W +R EL S + + R EG D++ + H K M + ++F + E ++PDYLC KI+ ++ R+P ITPSG+TY+R I +HL +VG FDP+TR PL + QL+PNLA+KE ++ I E W+ Sbjct: 87 LELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLN--FGDDIPSALRIAKKKRWNSIEERRIHQESELHSYLSRLIAAERERELEECQRNHEGDEDDSHVRAQQACIEAKHDKYMADMDELFSQVDEKRKKRDIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQEQLIPNLAMKEVIDAFISENGWV 300 The following BLAST results are available for this feature:
BLAST of EY684687 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY684687 ID=EY684687; Name=EY684687; organism=Citrus sinensis; type=EST; length=888bpback to top |