EY684645

Overview
NameEY684645
Unique NameEY684645
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length529
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4132 contig Csv1_Contig4132:468..996. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY684645 vs. ExPASy Swiss-Prot
Match: DIM_PEA (Cell elongation protein diminuto OS=Pisum sativum GN=DIM PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.294e-21
Identity = 48/59 (81.36%), Postives = 51/59 (86.44%), Query Frame = 2 
Query:   71 WRMFDADLYEKCRKKYKAVGTFMSVYYKSKKGRKTEKEVQEAEQAQLEPAYAEVDQPID 247
            WRMFDA LYE CR+KY AVGTFMSVYYK KKGRKTEKEV+EAEQA L+ AY EVDQP D
Sbjct:  509 WRMFDAGLYEHCRRKYGAVGTFMSVYYKCKKGRKTEKEVREAEQAHLDTAYPEVDQPPD 567
[Close]
BLAST of EY684645 vs. ExPASy Swiss-Prot
Match: DIM_ARATH (Cell elongation protein DIMINUTO OS=Arabidopsis thaliana GN=DIM PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 6.675e-21
Identity = 45/55 (81.82%), Postives = 51/55 (92.73%), Query Frame = 2 
Query:   71 WRMFDADLYEKCRKKYKAVGTFMSVYYKSKKGRKTEKEVQEAEQAQLEPAYAEVD 235
            WRMF+ +LYE+CRKKY+A+GTFMSVYYKSKKGRKTEKEV+EAEQA LE AYAE D
Sbjct:  507 WRMFNGELYEECRKKYRAIGTFMSVYYKSKKGRKTEKEVREAEQAHLETAYAEAD 561
The following BLAST results are available for this feature:
BLAST of EY684645 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
DIM_PEA2.294e-2181.36Cell elongation protein diminuto OS=Pisum sativum ... [more]
DIM_ARATH6.675e-2181.82Cell elongation protein DIMINUTO OS=Arabidopsis th... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-015-F07-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684645 ID=EY684645; Name=EY684645; organism=Citrus sinensis; type=EST; length=529bp
CCACGCGTCCGCGGACGCGTGGGCAGATAGTGCTGATCGTTAAGGATGAT
TTTTATTTTTATTTTTATTCTGGAGGATGTTTGATGCCGATCTGTATGAG
AAATGCAGGAAAAAGTATAAAGCTGTGGGAACCTTCATGAGCGTGTACTA
CAAGTCCAAGAAAGGAAGGAAGACCGAAAAGGAGGTGCAAGAAGCCGAAC
AAGCCCAACTTGAGCCTGCTTATGCAGAGGTTGACCAGCCCATTGACTGA
TTTAAAACCGATCTTGGATTAATTGGTAGGATTTCTTGCTTTCCCCACCT
TTTCTTGTCTGTGTTTGTCTGTGTTATCCTTTGGATTGTAGTTTTTCCAT
TCATATGGTATCTACTGCCATTATTGAGTGTGTCGAGTTTCTTAACAGAT
TAGCGTAAGACTATTTGGATGGTTTTATGACTTTGGACAATGATTTAGGC
TTAAGACTGGAATGTTTTATGGCTGCTCTCTCTCACTCATAATTTTAGTG
CCTATATTTCGCTAAAAAAAAAAAAAAAA
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