EY680065
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RK24_PEA (50S ribosomal protein L24, chloroplastic OS=Pisum sativum GN=RPL24 PE=2 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.540e-61 Identity = 120/172 (69.77%), Postives = 138/172 (80.23%), Query Frame = 1 Query: 94 FFGQRLSFPSLSP-VTVKPTDKPCLIVVRLKRWERKECKPNSLPVLHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIIDSAENWKKLKEANRQEKTEVAT 606 F GQ LS +LSP + KPT+K CLIV++LKRWERKECKPNSLPVLHK+HVK GDTVKVI+G +KG+IGEITK+F+HNS+V+VKDINLKTKHV APIHSSNVMLYSKE +V SRVGHKVL++G RVRYLIKTGEIIDS ENWKKLKEAN++ AT Sbjct: 23 FLGQPLSPITLSPFLQGKPTEKKCLIVMKLKRWERKECKPNSLPVLHKLHVKVGDTVKVISGHEKGQIGEITKIFKHNSSVIVKDINLKTKHVKSNQEGEPGQINKVEAPIHSSNVMLYSKEKDVTSRVGHKVLENGKRVRYLIKTGEIIDSEENWKKLKEANKKTAEVAAT 194
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RK24_TOBAC (50S ribosomal protein L24, chloroplastic OS=Nicotiana tabacum GN=RPL24 PE=1 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 2.223e-60 Identity = 118/173 (68.21%), Postives = 131/173 (75.72%), Query Frame = 1 Query: 94 FFGQRLSFPSLSPVTVKPTDKPCLIVVRLKRWERKECKPNSLPVLHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIIDSAENWKKLKEANRQEKTEVATAA 612 FFGQR S P P VK T+ PCLI +LKRWERKECKPNSLPVLHKMHVK GDTVK+I+G DKGK+GEIT++ +HNS V+VKD+NLKTKHV APIHSSNVMLYSKE +VASRVGHK LD+G RVRYLIKTGEIIDSAENWK K +EKT A AA Sbjct: 15 FFGQRFSPPLSLPPLVKSTEGPCLIQAKLKRWERKECKPNSLPVLHKMHVKLGDTVKIISGHDKGKVGEITEIIKHNSKVVVKDVNLKTKHVKSRSEDEPGQIVKIEAPIHSSNVMLYSKEQKVASRVGHKTLDNGKRVRYLIKTGEIIDSAENWK--KAVKEKEKTTEAVAA 185
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RK24_ARATH (50S ribosomal protein L24, chloroplastic OS=Arabidopsis thaliana GN=RPL24 PE=2 SV=2) HSP 1 Score: 232.646 bits (592), Expect = 2.223e-60 Identity = 113/175 (64.57%), Postives = 134/175 (76.57%), Query Frame = 1 Query: 94 FFGQRLSFPSLSPVT--VKPTDKPCLIVVRLKRWERKECKPNSLPVLHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIIDSAENWKKLKEANRQEKTEVATAA 612 F GQRL P VT VKP + PCL++ +LKRWERKECKPNSLP+LHKMHVK GDTVKVI+G DKGKIGE+TK+F HNST+++KD+NLKTKH+ APIHSSNVMLYSKE +V SRVGHKVL+DG +VRYLIKTGE+ID+ E WK LKEA +E T+VA + Sbjct: 22 FLGQRLISPISLSVTSPVKPAENPCLVLAKLKRWERKECKPNSLPILHKMHVKFGDTVKVISGRDKGKIGEVTKIFTHNSTIVIKDVNLKTKHMKSREEGEPGQIVKIEAPIHSSNVMLYSKEKDVVSRVGHKVLEDGQKVRYLIKTGELIDTIEKWKLLKEAKDKETTQVAVTS 196
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RK24_SPIOL (50S ribosomal protein L24, chloroplastic OS=Spinacia oleracea GN=RPL24 PE=1 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 4.203e-51 Identity = 103/174 (59.20%), Postives = 128/174 (73.56%), Query Frame = 1 Query: 94 FFGQRLSFPSLSPVTVKPTD-KPCLIVVRLKRWERKECKPNSLPVLHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIIDSAENWKKLKEANRQEKTEVATAA 612 F GQRL FPS + + VK PCLIV+R+KRWERK+CKPNSLP LHK HVK GDTVKVI+G +KGKIGEI+K+ +HNSTV++KD+N KTKHV A IHSSNVML KE EVA RVGHK+L+D +VRYLIKTGEI+D+ + WK+++ ++ +T VA AA Sbjct: 20 FLGQRL-FPSPTTLQVKTEGHSPCLIVMRIKRWERKDCKPNSLPKLHKRHVKVGDTVKVISGGEKGKIGEISKIHKHNSTVIIKDLNFKTKHVKSKEEGEQGQIIKIEAAIHSSNVMLILKEQEVADRVGHKILEDVRKVRYLIKTGEIVDTPDRWKEIQN-KKESETAVAVAA 191
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_SYNP2 (50S ribosomal protein L24 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=rplX PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 4.232e-27 Identity = 59/113 (52.21%), Postives = 80/113 (70.80%), Query Frame = 1 Query: 205 KPNSLPVLHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 + +S P HKMHVK GDTV+VI+G DKGK+GE+ K +S V+VKD+N++TKHV APIHSSNVM YS++ +VASR+G+++ +DG +VR L KTGE+ID Sbjct: 4 RKSSTPTRHKMHVKTGDTVQVISGRDKGKVGEVIKTLPKSSKVVVKDVNIRTKHVKPQQEGESGQIQTFEAPIHSSNVMHYSEKEKVASRIGYQLTEDGRKVRVLKKTGEVID 116
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_TRIEI (50S ribosomal protein L24 OS=Trichodesmium erythraeum (strain IMS101) GN=rplX PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 5.174e-25 Identity = 58/108 (53.70%), Postives = 74/108 (68.52%), Query Frame = 1 Query: 220 PVLHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 P+ +K+HVK GDTV++IAG DKGK+GE+ KV S V+VKD+N+ TKHV APIHSSNVMLYS + +VASR+ + DDG +VR L KTGE+ID Sbjct: 15 PIRYKVHVKKGDTVQIIAGKDKGKVGEVLKVLPKVSKVIVKDVNIITKHVKPQQEGESGKIVTTEAPIHSSNVMLYSTKQKVASRICYTFTDDGRKVRMLKKTGEVID 122
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_MICAN (50S ribosomal protein L24 OS=Microcystis aeruginosa (strain NIES-843) GN=rplX PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.505e-24 Identity = 57/108 (52.78%), Postives = 72/108 (66.67%), Query Frame = 1 Query: 220 PVLHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 P KMHVK GD V+VIAG DKGK+GEI + STV+VK +N++TKH APIHSS VMLYS++ ++ASRVG+ + +DG +VR L KTGEIID Sbjct: 10 PQRQKMHVKKGDVVQVIAGSDKGKVGEILRALPQESTVVVKGVNIRTKHTKPQQEGESGQIVTYEAPIHSSKVMLYSEKKKIASRVGYTLTEDGRKVRILKKTGEIID 117
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_ANAVT (50S ribosomal protein L24 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=rplX PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.505e-24 Identity = 59/114 (51.75%), Postives = 74/114 (64.91%), Query Frame = 1 Query: 205 KPNSLPVLHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIIDS 546 K ++ P HK+HVK GDTV+VIAG DKGK+GE+ K S V+VK +N+KTKHV APIHSSNVMLYS + VASRV + +G +VR L KTGEI+D+ Sbjct: 4 KKDTTPKFHKLHVKTGDTVQVIAGKDKGKVGEVIKALPQLSKVIVKGVNIKTKHVKPQQEGESGRIVTQEAPIHSSNVMLYSTKQNVASRVCYTFTAEGKKVRKLKKTGEILDN 117
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_THEEB (50S ribosomal protein L24 OS=Thermosynechococcus elongatus (strain BP-1) GN=rplX PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.966e-24 Identity = 59/113 (52.21%), Postives = 72/113 (63.72%), Query Frame = 1 Query: 205 KPNSLPVLHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 543 K N PV ++MHVK GDTV+VIAG DK K+GE+ VF S V+VK +NLKTKH+ APIHS VMLYS + VASR+ + +DG +VR L KTGEIID Sbjct: 5 KANKKPVRYRMHVKKGDTVQVIAGSDKAKVGEVLAVFPKTSQVIVKGVNLKTKHLKPRQEGESGQIITKEAPIHSCKVMLYSTKQNVASRICYTYTEDGRKVRMLKKTGEIID 117
BLAST of EY680065 vs. ExPASy Swiss-Prot
Match: RL24_CYAA5 (50S ribosomal protein L24 OS=Cyanothece sp. (strain ATCC 51142) GN=rplX PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.568e-24 Identity = 57/109 (52.29%), Postives = 73/109 (66.97%), Query Frame = 1 Query: 220 PVLHKMHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVXXXXXXXXXXXXXXXAPIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIIDS 546 P +KMHVK GDT++VI+G DKGK+GE+ K S V+VK +N+KTKHV APIHSSNVMLYS + +VASR+ + ++G +VR L KTGEIIDS Sbjct: 7 PQRYKMHVKTGDTIQVISGRDKGKVGEVLKTIPTTSEVVVKGVNVKTKHVKPQQEGESGQIATFEAPIHSSNVMLYSTKEQVASRISYTFTEEGRKVRMLKKTGEIIDS 115 The following BLAST results are available for this feature:
BLAST of EY680065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >EY680065 ID=EY680065; Name=EY680065; organism=Citrus sinensis; type=EST; length=882bpback to top |