EY744817
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: RH20_ARATH (DEAD-box ATP-dependent RNA helicase 20 OS=Arabidopsis thaliana GN=RH20 PE=1 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 8.448e-70 Identity = 128/166 (77.11%), Postives = 145/166 (87.35%), Query Frame = 3 Query: 9 PRKLDLPPLTPFEMNFYVESPSVAAMSXXXXXXXXXXXXITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVPQG 506 PRKLDL LTPFE NFYVESP+VAAM+ ITVEG D+PKPVKSFRDVGFPDYV++E+ KAGF EPTPIQ+QGWPMA+KGRDLIGIAETGSGKTL+YLLPAIVHVNAQP L G+GPIVLVLAPTRELAVQIQQE++KFG+SS+IK+TC+YGGVP+G Sbjct: 48 PRKLDLDGLTPFEKNFYVESPAVAAMTDTEVEEYRKLREITVEGKDIPKPVKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIVHVNAQPMLAHGDGPIVLVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKG 213
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: RH20_ORYSJ (DEAD-box ATP-dependent RNA helicase 20 OS=Oryza sativa subsp. japonica GN=Os01g0197200 PE=3 SV=2) HSP 1 Score: 256.144 bits (653), Expect = 2.301e-67 Identity = 127/162 (78.40%), Postives = 139/162 (85.80%), Query Frame = 3 Query: 21 DLPPLTPFEMNFYVESPSVAAMSXXXXXXXXXXXXITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVPQG 506 DL L FE NFYVESPSVA M+ ITVEG DVPKPV+ FRDVGFP+YV+QEI+KAGF EPTPIQ+QGWPMAL+GRDLIGIAETGSGKTLAYLLPAIVHVNAQP L PG+GPIVLVLAPTRELAVQIQQE+TKFGASS+IKSTC+YGGVP+G Sbjct: 44 DLDGLPRFEKNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEITKAGFVEPTPIQSQGWPMALRGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEATKFGASSKIKSTCIYGGVPKG 205
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: RH30_ORYSJ (DEAD-box ATP-dependent RNA helicase 30 OS=Oryza sativa subsp. japonica GN=Os01g0911100 PE=2 SV=2) HSP 1 Score: 225.328 bits (573), Expect = 4.349e-58 Identity = 110/164 (67.07%), Postives = 128/164 (78.05%), Query Frame = 3 Query: 15 KLDLPPLTPFEMNFYVESPSVAAMSXXXXXXXXXXXXITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVPQG 506 K D L PFE NFYVE P+V AMS ITVEG DVPKPV+ F++ FPDY MQ I+K+GF EPTPIQ+QGWPMALKGRD+IGIA+TGSGKTL+YLLP +VHV AQP L G+GPIVL+LAPTRELAVQIQQES KFG+ S+ +STC+YGG P+G Sbjct: 202 KPDFRSLIPFEKNFYVECPAVQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPDYCMQAIAKSGFVEPTPIQSQGWPMALKGRDMIGIAQTGSGKTLSYLLPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQQESGKFGSYSRTRSTCIYGGAPKG 365
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: RH30_ARATH (DEAD-box ATP-dependent RNA helicase 30 OS=Arabidopsis thaliana GN=RH30 PE=2 SV=2) HSP 1 Score: 218.394 bits (555), Expect = 5.316e-56 Identity = 107/158 (67.72%), Postives = 125/158 (79.11%), Query Frame = 3 Query: 33 LTPFEMNFYVESPSVAAMSXXXXXXXXXXXXITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVPQG 506 L FE NFYVESP+V AM+ I+VEG DVPKP+K F+D FPD +++ I+K GF EPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPA+VHV+AQP L +GPIVL+LAPTRELAVQIQ+ES KFG S ++STC+YGG P+G Sbjct: 122 LVHFEKNFYVESPTVQAMTEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLGQDDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKG 279
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: DBP2_SCLS1 (ATP-dependent RNA helicase dbp2 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=dbp2 PE=3 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 6.943e-56 Identity = 106/162 (65.43%), Postives = 124/162 (76.54%), Query Frame = 3 Query: 21 DLPPLTPFEMNFYVESPSVAAMSXXXXXXXXXXXXITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVPQG 506 DL L FE +FY E P VAA S I V+GP++PKPV++F + GFP YVM E+ GF PTPIQ+QGWPMAL GRD++GIAETGSGKTL Y LPAIVH+NAQP L PG+GPIVLVLAPTRELAVQIQQE TKFG SS+I++TC+YGGVP+G Sbjct: 102 DLNTLPKFEKSFYKEDPVVAARSEEDVAKFRAQHNIAVQGPNIPKPVETFDEAGFPAYVMTEVKAQGFPAPTPIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQQEITKFGKSSRIRNTCVYGGVPKG 263
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: DBP2_BOTFB (ATP-dependent RNA helicase dbp2 OS=Botryotinia fuckeliana (strain B05.10) GN=dbp2 PE=3 SV=2) HSP 1 Score: 217.624 bits (553), Expect = 9.068e-56 Identity = 105/162 (64.81%), Postives = 124/162 (76.54%), Query Frame = 3 Query: 21 DLPPLTPFEMNFYVESPSVAAMSXXXXXXXXXXXXITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVPQG 506 DL + FE +FY E P VAA S I V+GP++PKPV++F + GFP YVM E+ GF PTPIQ+QGWPMAL GRD++GIAETGSGKTL Y LPAIVH+NAQP L PG+GPIVLVLAPTRELAVQIQQE TKFG SS+I++TC+YGGVP+G Sbjct: 55 DLSTMPKFEKSFYKEDPVVAARSEEDVAKFRAQHNIAVQGPNIPKPVETFDEAGFPAYVMTEVKAQGFPAPTPIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQQEITKFGKSSRIRNTCVYGGVPKG 216
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: DBP2_KLULA (ATP-dependent RNA helicase DBP2 OS=Kluyveromyces lactis GN=DBP2 PE=3 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 1.309e-54 Identity = 101/161 (62.73%), Postives = 123/161 (76.40%), Query Frame = 3 Query: 21 DLPPLTPFEMNFYVESPSVAAMSXXXXXXXXXXXXITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVPQ 503 +LP L FE NFY E P VA MS +T+ G DVPKP++SF + GFP YV+ E+ + GF +PT IQ QGWPMAL GRD+IG+A TGSGKTL+Y LP IVH+NAQP L PG+GPIVLVLAPTRELAVQIQ+E +KFGASS+I++TC+YGGVP+ Sbjct: 66 ELPNLPVFEKNFYQEHPDVAQMSESEVIEFRKENEMTISGHDVPKPIRSFDEAGFPSYVLDEVKQEGFAKPTGIQCQGWPMALSGRDMIGVAATGSGKTLSYCLPGIVHINAQPLLSPGDGPIVLVLAPTRELAVQIQKECSKFGASSRIRNTCVYGGVPK 226
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: DBP2_AJECN (ATP-dependent RNA helicase DBP2 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=DBP2 PE=3 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 6.499e-54 Identity = 102/162 (62.96%), Postives = 122/162 (75.31%), Query Frame = 3 Query: 21 DLPPLTPFEMNFYVESPSVAAMSXXXXXXXXXXXXITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVPQG 506 DL + FE +FY E P+V+ S ITV+G +VP+PV++F + GFP YVM E+ GF PT IQAQGWPMAL GRD++GIAETGSGKTL Y LPAIVH+NAQP L PG+GPIVLVLAPTRELAVQIQ E TKFG SS+I++TC+YGGVP+G Sbjct: 78 DLSTMPKFEKSFYKEHPNVSQRSTHEVDAFRKEHEITVQGKNVPRPVETFDEAGFPQYVMSEVKAQGFARPTAIQAQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQTEITKFGKSSRIRNTCVYGGVPKG 239
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: DBP2_CHAGB (ATP-dependent RNA helicase DBP2 OS=Chaetomium globosum GN=DBP2 PE=3 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 8.488e-54 Identity = 104/162 (64.20%), Postives = 122/162 (75.31%), Query Frame = 3 Query: 21 DLPPLTPFEMNFYVESPSVAAMSXXXXXXXXXXXXITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVPQG 506 DL L FE +FY E P+VAA S +TV G +VP PV++F + GFP YVM E+ GF PT IQ+QGWPMAL GRD++GIAETGSGKTL Y LPAIVH+NAQP L PG+GPIVLVLAPTRELAVQIQQE TKFG SS+I++TC+YGGVP+G Sbjct: 89 DLDTLPKFEKSFYQEHPNVAARSQAEVDKFRRDHAMTVAGNNVPSPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQQEITKFGKSSRIRNTCVYGGVPKG 250
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: DBP2_PICGU (ATP-dependent RNA helicase DBP2 OS=Pichia guilliermondii GN=DBP2 PE=3 SV=3) HSP 1 Score: 210.69 bits (535), Expect = 1.108e-53 Identity = 101/162 (62.35%), Postives = 121/162 (74.69%), Query Frame = 3 Query: 21 DLPPLTPFEMNFYVESPSVAAMSXXXXXXXXXXXXITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVPQG 506 DL L FE NFY E P V+A S + G D+PKP+ SF + GFPDYV+ E+ + GF +PT IQ QGWPMAL GRD+IGIA TGSGKTL+Y LP+IVH+NAQP L PG+GPIVLVLAPTRELAVQIQQE +KFGASS+I++TC+YGG P+G Sbjct: 78 DLDSLPKFEKNFYSEHPDVSARSESEVQSFRKEHDMKCVGTDIPKPITSFDEAGFPDYVLNEVKQQGFPKPTAIQCQGWPMALSGRDMIGIAATGSGKTLSYCLPSIVHINAQPLLGPGDGPIVLVLAPTRELAVQIQQECSKFGASSRIRNTCIYGGAPKG 239 The following BLAST results are available for this feature:
BLAST of EY744817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744817 ID=EY744817; Name=EY744817; organism=Citrus sinensis; type=EST; length=1010bpback to top |