EY744804
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744804 vs. ExPASy Swiss-Prot
Match: PABP2_ARATH (Polyadenylate-binding protein 2 OS=Arabidopsis thaliana GN=PAB2 PE=1 SV=1) HSP 1 Score: 253.447 bits (646), Expect = 4.002e-86 Identity = 126/182 (69.23%), Postives = 144/182 (79.12%), Query Frame = 1 Query: 13 QHQAQMSGPNGVAA----------GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 528 Q Q Q PNG A GA+ QF TSLYVGDLDFNVTDSQL+D F Q+G V++VRVCRDL TRRSLGYGYVN+ NP DAARA+ LN+ PL K IR+MYSHRDPS+R+SG GNIFIKNLD+SIDHKALHDTFSSFGNI+SCK+A D SGQSKG+GFVQ+ N+ESAQ AI+KL Sbjct: 3 QVQLQGQTPNGSTAAVTSAPATSGGATATQFGNTSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQELNYIPLYGKPIRVMYSHRDPSVRRSGAGNIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDSSGQSKGYGFVQYANEESAQKAIEKL 184 HSP 2 Score: 87.4261 bits (215), Expect = 4.002e-86 Identity = 41/55 (74.55%), Postives = 48/55 (87.27%), Query Frame = 2 Query: 530 NGMLINDKQVFVGHFLRKQEREIVAIKTKFNNVFVKNLAESTTNEDLKKFFGEYG 694 NGML+NDKQV+VG FLR+QER+ A KTKF NV+VKNLAESTT++DLK FGEYG Sbjct: 185 NGMLLNDKQVYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAFGEYG 239 HSP 3 Score: 108.227 bits (269), Expect = 8.656e-29 Identity = 56/157 (35.67%), Postives = 90/157 (57.32%), Query Frame = 1 Query: 85 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI----MYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLKWHAY 543 ++++ +LD ++ L+D FS G ++S +V D S+ +S GYG+V YAN A +A++ LN LN+K + + RD + K+ N+++KNL +S L + F +G I S + DG G+SKGFGFV FEN + A A++ L H + Sbjct: 125 NIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVD-SSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGEGKSKGFGFVNFENADDAARAVESLNGHKF 280 HSP 4 Score: 40.817 bits (94), Expect = 8.656e-29 Identity = 24/68 (35.29%), Postives = 36/68 (52.94%), Query Frame = 2 Query: 530 NGMLINDKQVFVGHFLRKQEREI------------VAIKTKFNNVFVKNLAESTTNEDLKKFFGEYGT 697 NG +DK+ +VG +K ERE A K + +N++VKNL S ++E LK+ F +GT Sbjct: 276 NGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVKNLDPSISDEKLKEIFSPFGT 343 HSP 5 Score: 93.5893 bits (231), Expect = 1.948e-18 Identity = 58/173 (33.53%), Postives = 92/173 (53.18%), Query Frame = 1 Query: 58 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI----MYSHRDPSIR------------KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 528 ++ N+ T++YV +L + TD L + F + G++ S V +D +S G+G+VN+ N DAARA++ LN ++K + S R+ +R K + N+++KNLD SI + L + FS FG + S K+ D +G SKG GFV F E A A+ +L Sbjct: 207 STANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKD-GEGKSKGFGFVNFENADDAARAVESLNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPEEATEAMSQL 378
BLAST of EY744804 vs. ExPASy Swiss-Prot
Match: PABP5_ARATH (Polyadenylate-binding protein 5 OS=Arabidopsis thaliana GN=PAB5 PE=1 SV=2) HSP 1 Score: 201.445 bits (511), Expect = 8.750e-65 Identity = 105/165 (63.64%), Postives = 130/165 (78.79%), Query Frame = 1 Query: 46 VAAGASGNQFLTT----SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 528 VAA A+ + L T SLYVGDLD +V +S L DLF+QV V ++RVCRDL T RSLGY YVN+ANP DA+RA++ LN+ P+ ++ IRIM S+RDPS R SG GN+FIKNLD SID+KAL++TFSSFG ILSCK+A D G+SKG+GFVQFE +E+AQ AIDKL Sbjct: 29 VAAAAAAAEALQTHPNSSLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRDL-THRSLGYAYVNFANPEDASRAMESLNYAPIRDRPIRIMLSNRDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTILSCKVAMDVVGRSKGYGFVQFEKEETAQAAIDKL 192 HSP 2 Score: 68.1662 bits (165), Expect = 8.750e-65 Identity = 34/58 (58.62%), Postives = 46/58 (79.31%), Query Frame = 2 Query: 530 NGMLINDKQVFVGHFLRKQER---EIVAIKTKFNNVFVKNLAESTTNEDLKKFFGEYG 694 NGML+NDKQVFVGHF+R+Q+R E A+ + F NV+VKNL + T+++LKK FG+YG Sbjct: 193 NGMLLNDKQVFVGHFVRRQDRARSESGAVPS-FTNVYVKNLPKEITDDELKKTFGKYG 249 HSP 3 Score: 94.7449 bits (234), Expect = 7.234e-24 Identity = 53/154 (34.42%), Postives = 86/154 (55.84%), Query Frame = 1 Query: 85 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTG------NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 528 ++++ +LD ++ + LY+ FS G +LS +V D+ RS GYG+V + A A+D LN LN+K + + + R +S +G N+++KNL K I L TF +G+I S + D SG S+ FGFV F + E+A A++K+ Sbjct: 133 NVFIKNLDASIDNKALYETFSSFGTILSCKVAMDV-VGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDRARSESGAVPSFTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSPEAAAVAVEKM 285 HSP 4 Score: 37.7354 bits (86), Expect = 7.234e-24 Identity = 21/68 (30.88%), Postives = 37/68 (54.41%), Query Frame = 2 Query: 530 NGMLINDKQVFVGHFLRKQEREIVAIKTKF-------------NNVFVKNLAESTTNEDLKKFFGEYG 694 NG+ + + ++VG +K +RE ++ KF +N+++KNL +S +E LK+ F EYG Sbjct: 286 NGISLGEDVLYVGRAQKKSDRE-EELRRKFEQERISRFEKLQGSNLYLKNLDDSVNDEKLKEMFSEYG 352 HSP 5 Score: 87.8113 bits (216), Expect = 5.112e-17 Identity = 52/165 (31.52%), Postives = 87/165 (52.73%), Query Frame = 1 Query: 82 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI----MYSHRDPSIR------------KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 528 T++YV +L +TD +L F + G + S V +D S S +G+VN+ +P AA A++ +N L + + S R+ +R K N+++KNLD S++ + L + FS +GN+ SCK+ + G S+GFGFV + N E A A+ ++ Sbjct: 225 TNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGN-SRSFGFVNFVSPEAAAVAVEKMNGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLAMKEM 388 HSP 6 Score: 21.557 bits (44), Expect = 5.112e-17 Identity = 9/22 (40.91%), Postives = 14/22 (63.64%), Query Frame = 2 Query: 530 NGMLINDKQVFVGHFLRKQERE 595 NG +I K ++V RK+ER+ Sbjct: 389 NGKMIGRKPLYVALAQRKEERQ 410
BLAST of EY744804 vs. ExPASy Swiss-Prot
Match: PABPB_XENLA (Polyadenylate-binding protein 1-B OS=Xenopus laevis GN=pabpc1-B PE=2 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 3.596e-63 Identity = 99/156 (63.46%), Postives = 123/156 (78.85%), Query Frame = 1 Query: 61 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 528 S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PADA RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FGNILSCK+ D +G SKG+GFV FE +E+A+ AIDK+ Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIDKM 158 HSP 2 Score: 60.077 bits (144), Expect = 3.596e-63 Identity = 29/63 (46.03%), Postives = 43/63 (68.25%), Query Frame = 2 Query: 530 NGMLINDKQVFVGHFLRKQERE--IVAIKTKFNNVFVKNLAESTTNEDLKKFFGEYGTNYPVQ 712 NGML+ND++VFVG F ++ERE + A +F NV++KN E +E LK++FG+YG V+ Sbjct: 159 NGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEWFGQYGAALSVK 221 HSP 3 Score: 95.9005 bits (237), Expect = 9.422e-24 Identity = 53/154 (34.42%), Postives = 86/154 (55.84%), Query Frame = 1 Query: 85 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 528 ++++ +LD ++ + LYD FS G +LS +V D S GYG+V++ A RA+D +N LN++ + + R+ + R N++IKN + +D + L + F +G LS K+ TD G+S+GFGFV FE E AQ A+D + Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD--ENGSKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEWFGQYGAALSVKVMTDDHGKSRGFGFVSFERHEDAQKAVDDM 251 HSP 4 Score: 36.1946 bits (82), Expect = 9.422e-24 Identity = 23/69 (33.33%), Postives = 35/69 (50.72%), Query Frame = 2 Query: 530 NGMLINDKQVFVGHFLRKQEREIVAIKTKFN-------------NVFVKNLAESTTNEDLKKFFGEYGT 697 NG +N K +FVG +K ER+ +K KF N++VKNL + +E L+K F +G+ Sbjct: 252 NGKDLNGKAIFVGRAQKKVERQ-TELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFTPFGS 319 HSP 5 Score: 89.3521 bits (220), Expect = 3.029e-17 Identity = 58/175 (33.14%), Postives = 93/175 (53.14%), Query Frame = 1 Query: 55 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHR-----------------DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 528 GA +F T++Y+ + ++ D +L + F Q G LSV+V D +S G+G+V++ DA +A+D +N LN K+I + + + D R G N+++KNLD ID + L F+ FG+I S K+ +G G+SKGFGFV F + E A A+ ++ Sbjct: 184 GARAKEF--TNVYIKNFGEDMDDERLKEWFGQYGAALSVKVMTD-DHGKSRGFGFVSFERHEDAQKAVDDMNGKDLNGKAIFVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVKNLDDGIDDERLRKEFTPFGSITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEM 353 HSP 6 Score: 20.7866 bits (42), Expect = 3.029e-17 Identity = 8/22 (36.36%), Postives = 14/22 (63.64%), Query Frame = 2 Query: 530 NGMLINDKQVFVGHFLRKQERE 595 NG ++ K ++V RK+ER+ Sbjct: 354 NGRIVATKPLYVALAQRKEERQ 375
BLAST of EY744804 vs. ExPASy Swiss-Prot
Match: PABP3_ARATH (Polyadenylate-binding protein 3 OS=Arabidopsis thaliana GN=PAB3 PE=2 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 6.112e-63 Identity = 100/149 (67.11%), Postives = 121/149 (81.21%), Query Frame = 1 Query: 82 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 528 +SLY GDLD VT++ L+DLF V V+SVRVCRD RRSLGY Y+N++NP DA RA++ LN+TPL ++ IRIM S+RDPS R SG GNIFIKNLD SID+KAL +TFSSFG ILSCK+A D +G+SKG+GFVQFE +ESAQ AIDKL Sbjct: 49 SSLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRD-QNRRSLGYAYINFSNPNDAYRAMEALNYTPLFDRPIRIMLSNRDPSTRLSGKGNIFIKNLDASIDNKALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKL 196 HSP 2 Score: 63.1586 bits (152), Expect = 6.112e-63 Identity = 30/57 (52.63%), Postives = 42/57 (73.68%), Query Frame = 2 Query: 530 NGMLINDKQVFVGHFLRKQE--REIVAIKTKFNNVFVKNLAESTTNEDLKKFFGEYG 694 NGML+NDKQVFVGHF+R+QE R+ +F NV+VKNL + ++L+K FG++G Sbjct: 197 NGMLMNDKQVFVGHFIRRQERARDENTPTPRFTNVYVKNLPKEIGEDELRKTFGKFG 253 HSP 3 Score: 95.1301 bits (235), Expect = 1.490e-24 Identity = 55/154 (35.71%), Postives = 84/154 (54.55%), Query Frame = 1 Query: 85 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKS------IRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 528 ++++ +LD ++ + L++ FS G +LS +V D+ T RS GYG+V + A A+D LN +N+K IR RD + N+++KNL K I L TF FG I S + D SG S+ FGFV FE E+A +A++K+ Sbjct: 137 NIFIKNLDASIDNKALFETFSSFGTILSCKVAMDV-TGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQVFVGHFIRRQERARDENTPTPRFTNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCFGFVNFECTEAAASAVEKM 289 HSP 4 Score: 39.6614 bits (91), Expect = 1.490e-24 Identity = 23/68 (33.82%), Postives = 36/68 (52.94%), Query Frame = 2 Query: 530 NGMLINDKQVFVGHFLRKQEREIVAIKTKFN-------------NVFVKNLAESTTNEDLKKFFGEYG 694 NG+ + D ++VG +K ERE ++ KF N+++KNL +S +E LK+ F EYG Sbjct: 290 NGISLGDDVLYVGRAQKKSERE-EELRRKFEQERINRFEKSQGANLYLKNLDDSVDDEKLKEMFSEYG 356 HSP 5 Score: 81.6481 bits (200), Expect = 7.660e-15 Identity = 51/165 (30.91%), Postives = 85/165 (51.52%), Query Frame = 1 Query: 82 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI----MYSHRDPSIR------------KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 528 T++YV +L + + +L F + G + S V RD S S +G+VN+ AA A++ +N L + + + S R+ +R KS N+++KNLD S+D + L + FS +GN+ S K+ + G S+GFGFV + N E A A+ ++ Sbjct: 229 TNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGN-SRCFGFVNFECTEAAASAVEKMNGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEKSQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRALSEM 392
BLAST of EY744804 vs. ExPASy Swiss-Prot
Match: PABP_NEOFI (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=pab1 PE=3 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.038e-62 Identity = 98/157 (62.42%), Postives = 123/157 (78.34%), Query Frame = 1 Query: 49 AAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAI 519 +A S NQ + SLYVG+LD +VT++ LY+LFS +GQV S+RVCRD TRRSLGY YVNY N AD RAL+ LN+T + K RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK+A D G SKG+GFV +E E+A NAI Sbjct: 41 SATPSANQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAI 197 HSP 2 Score: 59.6918 bits (143), Expect = 1.038e-62 Identity = 25/57 (43.86%), Postives = 41/57 (71.93%), Query Frame = 2 Query: 530 NGMLINDKQVFVGHFLRKQERE--IVAIKTKFNNVFVKNLAESTTNEDLKKFFGEYG 694 NGML+NDK+VFVGH + K++R+ +K F NV++KN+ + T+E+ +K F ++G Sbjct: 201 NGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQEVTDEEFRKMFEKFG 257 HSP 3 Score: 89.3521 bits (220), Expect = 1.487e-20 Identity = 49/154 (31.82%), Postives = 86/154 (55.84%), Query Frame = 1 Query: 85 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMY--SHRDPSIR----KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 528 ++++ +LD + + L+D F+ G +LS +V +D S GYG+V+Y A A+ +N LN+K + + + S +D + K+ N++IKN+D+ + + F FG I S ++ D G+S+GFGFV F +SAQ A+D++ Sbjct: 141 NVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQEVTDEEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNFSTHDSAQAAVDEM 293 HSP 4 Score: 31.9574 bits (71), Expect = 1.487e-20 Identity = 21/69 (30.43%), Postives = 34/69 (49.28%), Query Frame = 2 Query: 542 INDKQV-----FVGHFLRKQEREIV------------AIKTKFNNVFVKNLAESTTNEDLKKFFGEYGT 697 +NDK++ +VG +K ERE A K + N++VKNL + +E L++ F +GT Sbjct: 293 MNDKEIKGQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDVDDEKLRELFSPFGT 361
BLAST of EY744804 vs. ExPASy Swiss-Prot
Match: PABPA_XENLA (Polyadenylate-binding protein 1-A OS=Xenopus laevis GN=pabpc1-A PE=1 SV=3) HSP 1 Score: 203.371 bits (516), Expect = 2.304e-62 Identity = 98/156 (62.82%), Postives = 123/156 (78.85%), Query Frame = 1 Query: 61 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 528 S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PADA RALD +NF + + +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FGNILSCK+ D +G SKG+GFV FE +E+A+ AIDK+ Sbjct: 4 SAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIDKM 158 HSP 2 Score: 58.151 bits (139), Expect = 2.304e-62 Identity = 27/57 (47.37%), Postives = 40/57 (70.18%), Query Frame = 2 Query: 530 NGMLINDKQVFVGHFLRKQERE--IVAIKTKFNNVFVKNLAESTTNEDLKKFFGEYG 694 NGML+ND++VFVG F ++ERE + A +F NV++KN + +E LK+ FG+YG Sbjct: 159 NGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDDMNDERLKEMFGKYG 215 HSP 3 Score: 96.2857 bits (238), Expect = 7.241e-24 Identity = 53/154 (34.42%), Postives = 87/154 (56.49%), Query Frame = 1 Query: 85 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 528 ++++ +LD ++ + LYD FS G +LS +V D S GYG+V++ A RA+D +N LN++ + + R+ + R N++IKN ++ + L + F +G LS K+ TD +G+SKGFGFV FE E AQ A+D++ Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD--ENGSKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDNGKSKGFGFVSFERHEDAQKAVDEM 251 HSP 4 Score: 36.1946 bits (82), Expect = 7.241e-24 Identity = 24/69 (34.78%), Postives = 35/69 (50.72%), Query Frame = 2 Query: 530 NGMLINDKQVFVGHFLRKQEREIVAIKTKFN-------------NVFVKNLAESTTNEDLKKFFGEYGT 697 NG +N K +FVG +K ER+ +K KF N++VKNL + +E L+K F +GT Sbjct: 252 NGKDMNGKSMFVGRAQKKVERQ-TELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFLPFGT 319 HSP 5 Score: 88.5817 bits (218), Expect = 5.119e-17 Identity = 56/175 (32.00%), Postives = 92/175 (52.57%), Query Frame = 1 Query: 55 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHR-----------------DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 528 GA +F T++Y+ + ++ D +L ++F + G LSV+V D +S G+G+V++ DA +A+D +N +N KS+ + + + D R G N+++KNLD ID + L F FG I S K+ +G G+SKGFGFV F + E A A+ ++ Sbjct: 184 GARAKEF--TNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTD-DNGKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVKNLDDGIDDERLRKEFLPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEM 353 HSP 6 Score: 20.7866 bits (42), Expect = 5.119e-17 Identity = 8/22 (36.36%), Postives = 14/22 (63.64%), Query Frame = 2 Query: 530 NGMLINDKQVFVGHFLRKQERE 595 NG ++ K ++V RK+ER+ Sbjct: 354 NGRIVATKPLYVALAQRKEERQ 375
BLAST of EY744804 vs. ExPASy Swiss-Prot
Match: PABP_DROME (Polyadenylate-binding protein OS=Drosophila melanogaster GN=pAbp PE=1 SV=3) HSP 1 Score: 206.068 bits (523), Expect = 3.004e-62 Identity = 97/148 (65.54%), Postives = 121/148 (81.76%), Query Frame = 1 Query: 85 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 528 SLYVGDL +V +S L+D FS G VLS+RVCRD+ TRRSLGY YVN+ PADA RALD +NF + NK IRIM+S RDPS+R+SG GN+FIKNLD++ID+KA++DTFS+FGNILSCK+ATD G SKG+GFV FE +E+A +IDK+ Sbjct: 3 SLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDTMNFDLVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDEKGNSKGYGFVHFETEEAANTSIDKV 150 HSP 2 Score: 55.0694 bits (131), Expect = 3.004e-62 Identity = 32/64 (50.00%), Postives = 43/64 (67.19%), Query Frame = 2 Query: 530 NGMLINDKQVFVGHFLRKQEREI-VAIKTK-FNNVFVKNLAESTTNEDLKKFFGEYG--TNYPV 709 NGML+N K+V+VG F+ ++ERE + K K F NV+VKN E +E LK+FF YG T+Y V Sbjct: 151 NGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKV 214 HSP 3 Score: 83.9593 bits (206), Expect = 6.653e-17 Identity = 48/154 (31.17%), Postives = 82/154 (53.25%), Query Frame = 1 Query: 85 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI-MYSHRDPSIRKSGTG-----NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 528 ++++ +LD + + +YD FS G +LS +V D S GYG+V++ A ++D +N LN K + + + R ++ G N+++KN + D + L + F +G I S K+ + G+SKGFGFV FE E+A+ A+ L Sbjct: 91 NVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATD-EKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQAL 243 HSP 4 Score: 25.0238 bits (53), Expect = 6.653e-17 Identity = 17/61 (27.87%), Postives = 29/61 (47.54%), Query Frame = 2 Query: 551 KQVFVGHFLRKQEREIVAIKTKFN-------------NVFVKNLAESTTNEDLKKFFGEYG 694 K ++V +K ER+ +K KF N++VKNL ++ ++ L+ F YG Sbjct: 252 KSLYVARAQKKAERQ-QELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDRLRIAFSPYG 311
BLAST of EY744804 vs. ExPASy Swiss-Prot
Match: PABP_ASPFU (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus fumigatus GN=pab1 PE=3 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 6.651e-62 Identity = 96/153 (62.75%), Postives = 121/153 (79.08%), Query Frame = 1 Query: 61 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAI 519 S +Q + SLYVG+LD +VT++ LY+LFS +GQV S+RVCRD TRRSLGY YVNY N AD RAL+ LN+T + K RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK+A D G SKG+GFV +E E+A NAI Sbjct: 45 SASQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAI 197 HSP 2 Score: 59.6918 bits (143), Expect = 6.651e-62 Identity = 25/57 (43.86%), Postives = 41/57 (71.93%), Query Frame = 2 Query: 530 NGMLINDKQVFVGHFLRKQERE--IVAIKTKFNNVFVKNLAESTTNEDLKKFFGEYG 694 NGML+NDK+VFVGH + K++R+ +K F NV++KN+ + T+E+ +K F ++G Sbjct: 201 NGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQEVTDEEFRKMFEKFG 257 HSP 3 Score: 89.3521 bits (220), Expect = 1.487e-20 Identity = 49/154 (31.82%), Postives = 86/154 (55.84%), Query Frame = 1 Query: 85 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMY--SHRDPSIR----KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 528 ++++ +LD + + L+D F+ G +LS +V +D S GYG+V+Y A A+ +N LN+K + + + S +D + K+ N++IKN+D+ + + F FG I S ++ D G+S+GFGFV F +SAQ A+D++ Sbjct: 141 NVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQEVTDEEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNFSTHDSAQAAVDEM 293 HSP 4 Score: 31.9574 bits (71), Expect = 1.487e-20 Identity = 21/69 (30.43%), Postives = 34/69 (49.28%), Query Frame = 2 Query: 542 INDKQV-----FVGHFLRKQEREIV------------AIKTKFNNVFVKNLAESTTNEDLKKFFGEYGT 697 +NDK++ +VG +K ERE A K + N++VKNL + +E L++ F +GT Sbjct: 293 MNDKEIKGQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDVDDEKLRELFSPFGT 361
BLAST of EY744804 vs. ExPASy Swiss-Prot
Match: PABP1_RAT (Polyadenylate-binding protein 1 OS=Rattus norvegicus GN=Pabpc1 PE=2 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 6.660e-62 Identity = 98/156 (62.82%), Postives = 123/156 (78.85%), Query Frame = 1 Query: 61 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 528 S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PADA RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FGNILSCK+ D +G SKG+GFV FE +E+A+ AI+K+ Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKM 158 HSP 2 Score: 57.3806 bits (137), Expect = 6.660e-62 Identity = 27/57 (47.37%), Postives = 40/57 (70.18%), Query Frame = 2 Query: 530 NGMLINDKQVFVGHFLRKQERE--IVAIKTKFNNVFVKNLAESTTNEDLKKFFGEYG 694 NGML+ND++VFVG F ++ERE + A +F NV++KN E +E LK+ FG++G Sbjct: 159 NGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFG 215 HSP 3 Score: 99.3673 bits (246), Expect = 6.314e-26 Identity = 55/154 (35.71%), Postives = 88/154 (57.14%), Query Frame = 1 Query: 85 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 528 ++++ +LD ++ + LYD FS G +LS +V D S GYG+V++ A RA++ +N LN++ + + R+ + R N++IKN + +D + L + F FG LS K+ TD SG+SKGFGFV FE E AQ A+D++ Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD--ENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEM 251 HSP 4 Score: 40.0466 bits (92), Expect = 6.314e-26 Identity = 24/69 (34.78%), Postives = 36/69 (52.17%), Query Frame = 2 Query: 530 NGMLINDKQVFVGHFLRKQEREIVAIKTKFN-------------NVFVKNLAESTTNEDLKKFFGEYGT 697 NG +N KQ++VG +K ER+ +K KF N++VKNL + +E L+K F +GT Sbjct: 252 NGKELNGKQIYVGRAQKKVERQ-TELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGT 319 HSP 5 Score: 92.4337 bits (228), Expect = 3.711e-18 Identity = 60/175 (34.29%), Postives = 93/175 (53.14%), Query Frame = 1 Query: 55 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHR-----------------DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 528 GA +F T++Y+ + ++ D +L +LF + G LSV+V D S + S G+G+V++ DA +A+D +N LN K I + + + D R G N+++KNLD ID + L FS FG I S K+ +G G+SKGFGFV F + E A A+ ++ Sbjct: 184 GARAKEF--TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGK-SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEM 353 HSP 6 Score: 20.7866 bits (42), Expect = 3.711e-18 Identity = 8/22 (36.36%), Postives = 14/22 (63.64%), Query Frame = 2 Query: 530 NGMLINDKQVFVGHFLRKQERE 595 NG ++ K ++V RK+ER+ Sbjct: 354 NGRIVATKPLYVALAQRKEERQ 375
BLAST of EY744804 vs. ExPASy Swiss-Prot
Match: PABP4_HUMAN (Polyadenylate-binding protein 4 OS=Homo sapiens GN=PABPC4 PE=1 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 8.682e-62 Identity = 98/157 (62.42%), Postives = 123/157 (78.34%), Query Frame = 1 Query: 58 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 528 A+ + + SLYVGDL +VT++ LY+ FS G VLS+RVCRD+ TRRSLGY YVN+ PADA RALD +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS+FGNILSCK+ D +G SKG+ FV FE +E+A AI+K+ Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKM 158 HSP 2 Score: 57.3806 bits (137), Expect = 8.682e-62 Identity = 27/63 (42.86%), Postives = 41/63 (65.08%), Query Frame = 2 Query: 530 NGMLINDKQVFVGHFLRKQERE--IVAIKTKFNNVFVKNLAESTTNEDLKKFFGEYGTNYPVQ 712 NGML+ND++VFVG F ++ERE + A +F NV++KN E +E LK+ F ++G V+ Sbjct: 159 NGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVK 221 HSP 3 Score: 90.5077 bits (223), Expect = 4.883e-22 Identity = 49/154 (31.82%), Postives = 87/154 (56.49%), Query Frame = 1 Query: 85 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI-MYSHRDPSIRKSGTG-----NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 528 ++++ +LD ++ + LYD FS G +LS +V D S GY +V++ A +A++ +N LN++ + + + R + G N++IKN + +D ++L + FS FG LS K+ D +G+SKGFGFV +E E A A++++ Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD--ENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEM 251 HSP 4 Score: 35.8094 bits (81), Expect = 4.883e-22 Identity = 22/69 (31.88%), Postives = 36/69 (52.17%), Query Frame = 2 Query: 530 NGMLINDKQVFVGHFLRKQEREIVAIKTKFN-------------NVFVKNLAESTTNEDLKKFFGEYGT 697 NG I+ K +FVG +K ER+ +K KF N+++KNL ++ +E L+K F +G+ Sbjct: 252 NGKEISGKIIFVGRAQKKVERQ-AELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGS 319 HSP 5 Score: 92.4337 bits (228), Expect = 4.339e-18 Identity = 60/174 (34.48%), Postives = 92/174 (52.87%), Query Frame = 1 Query: 55 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSI----------------RIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 528 GA +F T++Y+ + V D L +LFSQ G+ LSV+V RD +S G+G+V+Y DA +A++ +N ++ K I R + I + N++IKNLD +ID + L FS FG+I S K+ + G+SKGFGFV F + E A A+ ++ Sbjct: 184 GAKAKEF--TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEM 353 The following BLAST results are available for this feature:
BLAST of EY744804 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744804 ID=EY744804; Name=EY744804; organism=Citrus sinensis; type=EST; length=1000bpback to top |