EY679889
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679889 vs. ExPASy Swiss-Prot
Match: PSAF_ARATH (Photosystem I reaction center subunit III, chloroplastic OS=Arabidopsis thaliana GN=PSAF PE=1 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.994e-42 Identity = 78/87 (89.66%), Postives = 85/87 (97.70%), Query Frame = 2 Query: 2 LPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWPVAAYREFVNGELVVKDV 262 LPHLIV+GDQRHWGEFITPG+LFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASR++FRGF WPVAAYREF+NG+L+ KDV Sbjct: 135 LPHLIVNGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRIIFRGFIWPVAAYREFLNGDLIAKDV 221
BLAST of EY679889 vs. ExPASy Swiss-Prot
Match: PSAF_HORVU (Photosystem I reaction center subunit III, chloroplastic OS=Hordeum vulgare GN=PSAF PE=1 SV=2) HSP 1 Score: 160.229 bits (404), Expect = 1.538e-38 Identity = 73/86 (84.88%), Postives = 81/86 (94.19%), Query Frame = 2 Query: 2 LPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWPVAAYREFVNGELVVKD 259 LPHLIVSGDQRHWGEFITPG+LFLYIAGWIGWVGRSYLIA+SGEKKPAM+EIIIDV LA+R++ RGF WPVAAYRE +NG+LVV D Sbjct: 145 LPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSGEKKPAMREIIIDVELAARIIPRGFIWPVAAYRELINGDLVVDD 230
BLAST of EY679889 vs. ExPASy Swiss-Prot
Match: PSAF_FLATR (Photosystem I reaction center subunit III, chloroplastic OS=Flaveria trinervia GN=PSAF PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 2.008e-38 Identity = 72/83 (86.75%), Postives = 79/83 (95.18%), Query Frame = 2 Query: 2 LPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWPVAAYREFVNGELV 250 LPHLIVSGDQRHWGEFITPG+LFLYIAGWIGWVGRSYLIAI EKKP KEIIIDVPLA++L+FRGFSWPVAAYRE++NGEL+ Sbjct: 146 LPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLATKLLFRGFSWPVAAYREYLNGELI 228
BLAST of EY679889 vs. ExPASy Swiss-Prot
Match: PSAF_SPIOL (Photosystem I reaction center subunit III, chloroplastic OS=Spinacia oleracea GN=PSAF PE=1 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 3.426e-38 Identity = 74/83 (89.16%), Postives = 77/83 (92.77%), Query Frame = 2 Query: 2 LPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWPVAAYREFVNGELV 250 LPHLIVSGDQRHWGEFITPG+LFLYIAGWIGWVGRSYLIAI EKKP KEIIIDVPLAS L+FRGFSWPVAAYRE +NGELV Sbjct: 145 LPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLASSLLFRGFSWPVAAYRELLNGELV 227
BLAST of EY679889 vs. ExPASy Swiss-Prot
Match: PSAF_SYNP6 (Photosystem I reaction center subunit III OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=psaF PE=1 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 7.409e-25 Identity = 54/85 (63.53%), Postives = 65/85 (76.47%), Query Frame = 2 Query: 2 LPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWPVAAYREFVNGELVVK 256 LPHLIV G H G+FI P LLFLYIAGWIGWVGRSYL AI +K A KEI+IDVPLA + GF+WP+AA++EF +G+L+ K Sbjct: 66 LPHLIVDGRLDHAGDFIIPSLLFLYIAGWIGWVGRSYLQAIKSDKDAAGKEIVIDVPLAVKFSLTGFAWPLAAFQEFSSGKLLAK 150
BLAST of EY679889 vs. ExPASy Swiss-Prot
Match: PSAF_SYNY3 (Photosystem I reaction center subunit III OS=Synechocystis sp. (strain PCC 6803) GN=psaF PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 1.070e-23 Identity = 50/85 (58.82%), Postives = 64/85 (75.29%), Query Frame = 2 Query: 5 PHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWPVAAYREFVNGELVVKD 259 PHLIV G H G+F+ P +LFLYIAGWIGWVGRSYLI I K P M+E++I+VPLA + + GF WP+AA E+ +G+LV+KD Sbjct: 73 PHLIVDGRFTHAGDFLIPSILFLYIAGWIGWVGRSYLIEIRESKNPEMQEVVINVPLAIKKMLGGFLWPLAAVGEYTSGKLVMKD 157
BLAST of EY679889 vs. ExPASy Swiss-Prot
Match: PSAF_GRATL (Photosystem I reaction center subunit III OS=Gracilaria tenuistipitata var. liui GN=psaF PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 3.113e-23 Identity = 53/89 (59.55%), Postives = 62/89 (69.66%), Query Frame = 2 Query: 2 LPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWPVAAYREFVNGELVV--KDV 262 LPHLI G H GEF+ PG+LFLYI GWIGWVGR YL IS KP KEII+DVPLA + GF+WP+AA +E +GELV KD+ Sbjct: 94 LPHLITDGRWNHAGEFMIPGVLFLYITGWIGWVGRGYLRDISQTTKPTEKEIILDVPLALKYCLSGFTWPLAAIKELTSGELVADNKDI 182
BLAST of EY679889 vs. ExPASy Swiss-Prot
Match: PSAF_PORYE (Photosystem I reaction center subunit III OS=Porphyra yezoensis GN=psaF PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 5.310e-23 Identity = 47/86 (54.65%), Postives = 64/86 (74.42%), Query Frame = 2 Query: 2 LPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWPVAAYREFVNGELVVKD 259 LPHLI G G+F+ PGLLFLYI GWIGWVGR YL++++ KP KEII+DVPLA + + GF+WP+AA++EF +G+L+ + Sbjct: 88 LPHLISDGRWSRAGDFVFPGLLFLYITGWIGWVGRGYLLSVAKTSKPTEKEIILDVPLAIKFMSSGFAWPLAAWQEFSSGQLIASN 173
BLAST of EY679889 vs. ExPASy Swiss-Prot
Match: PSAF_PORPU (Photosystem I reaction center subunit III OS=Porphyra purpurea GN=psaF PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 6.934e-23 Identity = 47/83 (56.63%), Postives = 63/83 (75.90%), Query Frame = 2 Query: 2 LPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWPVAAYREFVNGELV 250 LPHLI G G+F+ PGLLFLYI GWIGWVGR YL++++ KP KEII+DVPLA + + GF+WP+AA++EF +G+L+ Sbjct: 92 LPHLISDGRWSRAGDFVFPGLLFLYITGWIGWVGRGYLLSVAKTSKPTEKEIILDVPLAVKFMSSGFAWPLAAWQEFSSGQLI 174
BLAST of EY679889 vs. ExPASy Swiss-Prot
Match: PSAF_GUITH (Photosystem I reaction center subunit III OS=Guillardia theta GN=psaF PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 6.934e-23 Identity = 49/86 (56.98%), Postives = 60/86 (69.77%), Query Frame = 2 Query: 2 LPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWPVAAYREFVNGELVVKD 259 LPHLI G H GEF+ PGL FLYIAGWIGWVGR+Y+ S KP KEIIIDVP+A + G+ WP AA++EF +G L+ K+ Sbjct: 90 LPHLIADGRWSHAGEFMVPGLFFLYIAGWIGWVGRNYVQFASQTDKPTEKEIIIDVPVALSFISTGYIWPFAAFKEFTSGNLIAKE 175 The following BLAST results are available for this feature:
BLAST of EY679889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >EY679889 ID=EY679889; Name=EY679889; organism=Citrus sinensis; type=EST; length=941bpback to top |