EY679809
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679809 vs. ExPASy Swiss-Prot
Match: RCA1_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 1.511e-81 Identity = 125/154 (81.17%), Postives = 131/154 (85.06%), Query Frame = 3 Query: 12 AGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPK 473 AGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNK+EN RVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVC GIFR DNV +D+VK+VD FPGQSIDFFGALRARVYDDEVR W L+NS + PTFEQPK Sbjct: 238 AGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCTGIFRTDNVPAEDVVKIVDNFPGQSIDFFGALRARVYDDEVRKWVSGTGIEKIGDKLLNSFDGPPTFEQPK 391 HSP 2 Score: 67.3958 bits (163), Expect = 1.511e-81 Identity = 32/41 (78.05%), Postives = 35/41 (85.37%), Query Frame = 1 Query: 451 PQHSSNPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEA 573 P P+MT+EKLLEYGNM+VQEQENVKRVQLADKYL EA Sbjct: 384 PPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLKEA 424
BLAST of EY679809 vs. ExPASy Swiss-Prot
Match: RCA2_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Nicotiana tabacum GN=RCA PE=2 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 4.374e-81 Identity = 125/154 (81.17%), Postives = 133/154 (86.36%), Query Frame = 3 Query: 12 AGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPK 473 AGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNK+EN RVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR DNV ++ ++K+VDTFPGQSIDFFGALRARVYDDEVR W L+NS + PTFEQPK Sbjct: 238 AGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVIKIVDTFPGQSIDFFGALRARVYDDEVRKWVSGTGIEAIGDKLLNSFDGPPTFEQPK 391 HSP 2 Score: 63.5438 bits (153), Expect = 4.374e-81 Identity = 30/41 (73.17%), Postives = 34/41 (82.93%), Query Frame = 1 Query: 451 PQHSSNPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEA 573 P P+MT+EKLLEYGNM+VQEQENVKRVQLA+ YL EA Sbjct: 384 PPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLAETYLKEA 424
BLAST of EY679809 vs. ExPASy Swiss-Prot
Match: RCA_SPIOL (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 249.595 bits (636), Expect = 4.176e-80 Identity = 121/154 (78.57%), Postives = 128/154 (83.12%), Query Frame = 3 Query: 12 AGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPK 473 AGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNK++N RVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVC GIF+ D V + +VKLVD FPGQSIDFFGALRARVY DEVR W LVNSK+ P FEQP+ Sbjct: 232 AGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYHDEVRKWVNSVGVDNVGKKLVNSKDGPPVFEQPE 385 HSP 2 Score: 62.003 bits (149), Expect = 4.176e-80 Identity = 28/41 (68.29%), Postives = 34/41 (82.93%), Query Frame = 1 Query: 451 PQHSSNPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEA 573 P P MT++KL+EYGNM+VQEQENVKRVQLAD+Y+S A Sbjct: 378 PPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSA 418 HSP 3 Score: 30.4166 bits (67), Expect = 4.176e-80 Identity = 18/50 (36.00%), Postives = 28/50 (56.00%), Query Frame = 2 Query: 575 ALGETNADAIPK*KFPWQSSPPNECTNSWKECPVPTAKTLNPIAKSDDGN 724 ALG+ N DAI + F +++ + + C P AK +P A+SDDG+ Sbjct: 419 ALGDANKDAIDRGTFFGKAAQQVSLPVA-QGCTDPEAKNYDPTARSDDGS 467
BLAST of EY679809 vs. ExPASy Swiss-Prot
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1) HSP 1 Score: 275.404 bits (703), Expect = 1.648e-74 Identity = 135/154 (87.66%), Postives = 136/154 (88.31%), Query Frame = 3 Query: 12 AGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPK 473 AGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR DNVADDDIVKLVDTFPGQSIDFFGALRARVY DEVR W LVNSKE P+FEQPK Sbjct: 234 AGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVADDDIVKLVDTFPGQSIDFFGALRARVYHDEVRKWVSEVGVDTIGKKLVNSKEGPPSFEQPK 387 HSP 2 Score: 26.5646 bits (57), Expect = 1.648e-74 Identity = 18/51 (35.29%), Postives = 24/51 (47.06%), Query Frame = 2 Query: 575 ALGETNADAIPK*KFPWQSSPPNECTNSWKE-CPVPTAKTLNPIAKSDDGN 724 ALG+ N DAI + F + E C P A +P A+SDDG+ Sbjct: 421 ALGDANNDAIKRGTFYGGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGS 471
BLAST of EY679809 vs. ExPASy Swiss-Prot
Match: RCA_ORYSJ (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2) HSP 1 Score: 267.7 bits (683), Expect = 4.768e-74 Identity = 128/154 (83.12%), Postives = 135/154 (87.66%), Query Frame = 3 Query: 12 AGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPK 473 AGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKE+NPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR+DR+GVCKGIFR DNV D+DIVK+VD+FPGQSIDFFGALRARVYDDEVR W LVNS+E P FEQPK Sbjct: 225 AGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSDTGVENIGKRLVNSREGPPEFEQPK 378 HSP 2 Score: 32.7278 bits (73), Expect = 4.768e-74 Identity = 18/50 (36.00%), Postives = 26/50 (52.00%), Query Frame = 2 Query: 575 ALGETNADAIPK*KFPWQSSPPNECTNSWKECPVPTAKTLNPIAKSDDGN 724 ALG+ N+DA+ F Q + + C P AK +P A+SDDG+ Sbjct: 412 ALGDANSDAMKTGSFYGQGAQQAGNLPVPEGCTDPVAKNFDPTARSDDGS 461
BLAST of EY679809 vs. ExPASy Swiss-Prot
Match: RCA_MALDO (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 4.953e-72 Identity = 133/154 (86.36%), Postives = 136/154 (88.31%), Query Frame = 3 Query: 12 AGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPK 473 AGR+GGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVC GIFR+DNVA +DIVKLVDTFPGQSIDFFGALRARVYDDEVR W LVNSKE PTFEQPK Sbjct: 234 AGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCIGIFRSDNVAKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWITGVGVDSIGKKLVNSKEGPPTFEQPK 387 HSP 2 Score: 69.3218 bits (168), Expect = 3.734e-11 Identity = 33/44 (75.00%), Postives = 38/44 (86.36%), Query Frame = 1 Query: 442 RKQPQHSSNPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEA 573 ++ P P+MT+EKLLEYGNM+VQEQENVKRVQLADKYLSEA Sbjct: 377 KEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLSEA 420
BLAST of EY679809 vs. ExPASy Swiss-Prot
Match: RCA2_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1) HSP 1 Score: 271.166 bits (692), Expect = 6.469e-72 Identity = 132/154 (85.71%), Postives = 135/154 (87.66%), Query Frame = 3 Query: 12 AGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPK 473 AGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR DNV ++DIVK+VD FPGQSIDFFGALRARVYDDEVR W LVNSKE PTFEQPK Sbjct: 234 AGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEDIVKVVDQFPGQSIDFFGALRARVYDDEVRKWVSEVGVDTIGKKLVNSKEGPPTFEQPK 387
BLAST of EY679809 vs. ExPASy Swiss-Prot
Match: RCA_MAIZE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Zea mays GN=RCA1 PE=2 SV=3) HSP 1 Score: 266.159 bits (679), Expect = 2.081e-70 Identity = 129/154 (83.77%), Postives = 134/154 (87.01%), Query Frame = 3 Query: 12 AGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPK 473 AGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKE+NPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR D V ++ +V+LVDTFPGQSIDFFGALRARVYDDEVR W LVNSKE PTFEQPK Sbjct: 230 AGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDGVDEEHVVQLVDTFPGQSIDFFGALRARVYDDEVRRWVSETGVENIARKLVNSKEGPPTFEQPK 383
BLAST of EY679809 vs. ExPASy Swiss-Prot
Match: RCAB_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplastic OS=Hordeum vulgare GN=RCAB PE=2 SV=1) HSP 1 Score: 266.159 bits (679), Expect = 2.081e-70 Identity = 129/154 (83.77%), Postives = 134/154 (87.01%), Query Frame = 3 Query: 12 AGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPK 473 AGRMGGTTQYTVNNQMVNATLMNIAD PT VQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR DNV D+ +V+LVDTFPGQSIDFFGALRARVYDDEVR W LVNS+E PTF+QPK Sbjct: 221 AGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPK 374
BLAST of EY679809 vs. ExPASy Swiss-Prot
Match: RCA_CUCSA (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 264.618 bits (675), Expect = 6.055e-70 Identity = 128/154 (83.12%), Postives = 134/154 (87.01%), Query Frame = 3 Query: 12 AGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPK 473 AGR+GGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRM+KFYWAPTREDRIG+C GIFR D V +DIVKLVDTFPGQSIDFFGALRARVYDDEVR W LVNSKE+ PTF+QPK Sbjct: 231 AGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIGICTGIFRTDGVPFEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGVERIGRNLVNSKESPPTFDQPK 384 The following BLAST results are available for this feature:
BLAST of EY679809 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >EY679809 ID=EY679809; Name=EY679809; organism=Citrus sinensis; type=EST; length=968bpback to top |