EY662312

Overview
NameEY662312
Unique NameEY662312
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length902
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY662312 vs. ExPASy Swiss-Prot
Match: NUD14_ARATH (Nudix hydrolase 14, chloroplastic OS=Arabidopsis thaliana GN=NUDT14 PE=1 SV=2)

HSP 1 Score: 283.878 bits (725), Expect = 8.694e-76
Identity = 156/261 (59.77%), Postives = 185/261 (70.88%), Query Frame = 2 
Query:   80 SSSSPLTHSITIPSQLSQPVHVVAAPGLSESDFRRVT*NCI*DS*VYYCFKKMMGLRRCAVESTLFKQWLKNLQSETGILANGDMLLKQVLIQGVDMFGKRIGFLKFKADIFCKETGQKV---------------LYSHEDQL*LS*FFWTRKVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCDEEISLFLYRGRVDQEIIMQLQGKETGLRDHGELIKGSCVP 817
            SSSS LT SIT+PSQ ++PV V A  G+S SDFR                         A++S+LF+ WL+NL+SE+GILA+G M LKQVLIQGVDMFGKRIGFLKFKADIF KETGQKV               L   + +   +    T +VRVPTG+++LELPAGMLDDDKGDFVGTAVREVEEE GI+LK EDM+DLTAFL PSTG + FPS GGCDEE+S+FLYRG+V++E I QLQGKETGLR+HGE IK   +P
Sbjct:   38 SSSSSLTQSITLPSQPNEPVLVSATAGISSSDFRD------------------------AIDSSLFRNWLRNLESESGILADGSMTLKQVLIQGVDMFGKRIGFLKFKADIFDKETGQKVPGIVFARGPAVAVLILLESDGE---TYAVLTEQVRVPTGKIVLELPAGMLDDDKGDFVGTAVREVEEEIGIKLKKEDMVDLTAFLDPSTGYRIFPSPGGCDEEMSVFLYRGQVEKETIRQLQGKETGLREHGEFIKVRLIP 271
The following BLAST results are available for this feature:
BLAST of EY662312 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
NUD14_ARATH8.694e-7659.77Nudix hydrolase 14, chloroplastic OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-042-G07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY662312 ID=EY662312; Name=EY662312; organism=Citrus sinensis; type=EST; length=902bp
CCTCGAAAAGAGCCACGCGTCCGCACTTTTTTACAGATCATCGAGAACGA
GACTAGTTTGTTCCAAAATGCCCACCGAGTCATCTTCTTCCCCTTTGACT
CATTCTATCACCATCCCGAGTCAACTCAGCCAACCCGTCCACGTTGTTGC
TGCCCCTGGTCTCTCCGAGTCCGATTTCAGGCGAGTAACATAAAATTGCA
TTTAAGATTCTTAGGTTTACTATTGTTTTAAAAAGATGATGGGGTTGCGC
AGGTGTGCTGTAGAATCAACTTTGTTCAAGCAATGGTTGAAAAACCTGCA
AAGCGAAACTGGGATTTTAGCCAATGGTGATATGCTCTTGAAACAAGTTC
TTATTCAGGGAGTGGATATGTTTGGGAAGCGTATTGGTTTTCTAAAGTTT
AAAGCAGACATTTTTTGTAAGGAAACAGGACAAAAGGTATTGTATTCGCA
CGAGGACCAGCTGTAGCTGTCTTAATTCTTTTGGACTCGGAAGGTAAGGG
TTCCCACTGGGAGAGTTATATTGGAATTACCTGCTGGGATGCTGGATGAT
GACAAGGGTGATTTTGTTGGCACAGCAGTCCGTGAGGTTGAGGAAGAGAC
TGGTATTCAGTTGAAGCTGGAAGACATGATTGACCTCACAGCCTTCTTGT
ACCCATCTACTGGATGCAAATTCTTCCCTTCTGCGGGAGGGTGCGATGAA
GAAATCAGCCTGTTTCTTTACAGAGGAAGAGTTGACCAGGAAATCATCAT
GCAGCTGCAAGGGAAAGAGACAGGTCTTCGCGACCATGGTGAGTTGATTA
AGGGTTCGTGTGTTCCCCTATCGTGAACTCTGGCGCACCACACCTGATGC
AAAGGGTTTAACTGCCATTGCCCTGTACGAGATGGCCAGTAAAGAAGAGC
TA
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