EY660363

Overview
NameEY660363
Unique NameEY660363
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length463
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7132 contig Csv1_Contig7132:1376..1838. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY660363 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSJ (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA2 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 7.394e-11
Identity = 28/32 (87.50%), Postives = 31/32 (96.88%), Query Frame = 3 
Query:   12 LLASIFSLLWVRVDPFTTRVTGPDVEQCGINC 107
            LLASIFSLLWVR+DPFTTRVTGPD ++CGINC
Sbjct: 1042 LLASIFSLLWVRIDPFTTRVTGPDTQKCGINC 1073
[Close]
BLAST of EY660363 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSI (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA2 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 7.394e-11
Identity = 28/32 (87.50%), Postives = 31/32 (96.88%), Query Frame = 3 
Query:   12 LLASIFSLLWVRVDPFTTRVTGPDVEQCGINC 107
            LLASIFSLLWVR+DPFTTRVTGPD ++CGINC
Sbjct: 1042 LLASIFSLLWVRIDPFTTRVTGPDTQKCGINC 1073
The following BLAST results are available for this feature:
BLAST of EY660363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
CESA2_ORYSJ7.394e-1187.50Probable cellulose synthase A catalytic subunit 2 ... [more]
CESA2_ORYSI7.394e-1187.50Probable cellulose synthase A catalytic subunit 2 ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-021-D08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660363 ID=EY660363; Name=EY660363; organism=Citrus sinensis; type=EST; length=463bp
CCACGCGTCCGCTCCTTGCCTCCATATTCTCTTTACTATGGGTGCGAGTT
GATCCCTTTACCACCAGAGTCACTGGTCCTGATGTCGAGCAATGTGGAAT
CAACTGCTGACAAATAGTGGCTGTATTTCAGAAAAATTGTTTTGGTCTCA
AGTCTAAAAGGTGGGAATCACTGAAGTTCATGATTTTGCCTCCTCGTCCT
GTCAGTGAACTTGTTTTTGTGTATGTGAACTTGTTTTTGTGTATGTGAAT
TCGCATCTTGTGCAGGATACATATATTTATATATCTATAGGTGGTGAAAA
CTAGAAAAATGGCGTTGTTGTTTATTTTTGAGAATCTGGAAGATTAGATT
ATTCTATTTTAATTGATACATGTAACCAAGCATACCGCTGAAAGATTTAT
TCATTCTTAGTATACATTGCCAAATTGGGAAGCAAAATCAAATAATAAAA
AAAAAAAAAAAAA
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