EY660145
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660145 vs. ExPASy Swiss-Prot
Match: PSD11_MOUSE (26S proteasome non-ATPase regulatory subunit 11 OS=Mus musculus GN=Psmd11 PE=1 SV=3) HSP 1 Score: 100.908 bits (250), Expect = 2.041e-25 Identity = 53/144 (36.81%), Postives = 91/144 (63.19%), Query Frame = 3 Query: 180 AQAKEASNPSDAISMLYRVL--DDPSSSSEALRVKELAITELSDLLRQENRAQDLCNLLTQLRPFFSLIPKAKTAKIVRGIIDAVAKIPGTSELQIALCKEMVQWTRAEKRTFLRQRVEARLAALLMESREYTEALTLLTSLVK 605 AQ+ +++ +I +L+ ++ D + EA++VKE +I EL LL + +A +L LL +RPF + I KAK A++VR ++D + + ++ LC E ++W ++EKRTFLRQ +EARL +L +++ Y EAL L + L++ Sbjct: 12 AQSLLSTDREASIDILHSIVKRDIQENDEEAVQVKEQSILELGSLLAKTGQAAELGGLLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEVELCLECIEWAKSEKRTFLRQALEARLVSLYFDTKRYQEALHLGSQLLR 155 HSP 2 Score: 36.5798 bits (83), Expect = 2.041e-25 Identity = 18/51 (35.29%), Postives = 27/51 (52.94%), Query Frame = 2 Query: 689 PKGKGCPHSSEDSCKCYICATRLTGTIDLQSGILH-AEEXDXKLLIAIXFE 838 PK + S+ + C +L T+D+QSGI+H AEE D K + +E Sbjct: 184 PKARAALTSARTTANAIYCPPKLQATLDMQSGIIHAAEEKDWKTAYSYFYE 234
BLAST of EY660145 vs. ExPASy Swiss-Prot
Match: PSD11_HUMAN (26S proteasome non-ATPase regulatory subunit 11 OS=Homo sapiens GN=PSMD11 PE=1 SV=3) HSP 1 Score: 100.908 bits (250), Expect = 2.041e-25 Identity = 53/144 (36.81%), Postives = 91/144 (63.19%), Query Frame = 3 Query: 180 AQAKEASNPSDAISMLYRVL--DDPSSSSEALRVKELAITELSDLLRQENRAQDLCNLLTQLRPFFSLIPKAKTAKIVRGIIDAVAKIPGTSELQIALCKEMVQWTRAEKRTFLRQRVEARLAALLMESREYTEALTLLTSLVK 605 AQ+ +++ +I +L+ ++ D + EA++VKE +I EL LL + +A +L LL +RPF + I KAK A++VR ++D + + ++ LC E ++W ++EKRTFLRQ +EARL +L +++ Y EAL L + L++ Sbjct: 12 AQSLLSTDREASIDILHSIVKRDIQENDEEAVQVKEQSILELGSLLAKTGQAAELGGLLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEVELCLECIEWAKSEKRTFLRQALEARLVSLYFDTKRYQEALHLGSQLLR 155 HSP 2 Score: 36.5798 bits (83), Expect = 2.041e-25 Identity = 18/51 (35.29%), Postives = 27/51 (52.94%), Query Frame = 2 Query: 689 PKGKGCPHSSEDSCKCYICATRLTGTIDLQSGILH-AEEXDXKLLIAIXFE 838 PK + S+ + C +L T+D+QSGI+H AEE D K + +E Sbjct: 184 PKARAALTSARTTANAIYCPPKLQATLDMQSGIIHAAEEKDWKTAYSYFYE 234
BLAST of EY660145 vs. ExPASy Swiss-Prot
Match: PSD11_BOVIN (26S proteasome non-ATPase regulatory subunit 11 OS=Bos taurus GN=PSMD11 PE=2 SV=3) HSP 1 Score: 100.908 bits (250), Expect = 2.041e-25 Identity = 53/144 (36.81%), Postives = 91/144 (63.19%), Query Frame = 3 Query: 180 AQAKEASNPSDAISMLYRVL--DDPSSSSEALRVKELAITELSDLLRQENRAQDLCNLLTQLRPFFSLIPKAKTAKIVRGIIDAVAKIPGTSELQIALCKEMVQWTRAEKRTFLRQRVEARLAALLMESREYTEALTLLTSLVK 605 AQ+ +++ +I +L+ ++ D + EA++VKE +I EL LL + +A +L LL +RPF + I KAK A++VR ++D + + ++ LC E ++W ++EKRTFLRQ +EARL +L +++ Y EAL L + L++ Sbjct: 12 AQSLLSTDREASIDILHSIVKRDIQENDEEAVQVKEQSILELGSLLAKTGQAAELGGLLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEVELCLECIEWAKSEKRTFLRQALEARLVSLYFDTKRYQEALHLGSQLLR 155 HSP 2 Score: 36.5798 bits (83), Expect = 2.041e-25 Identity = 18/51 (35.29%), Postives = 27/51 (52.94%), Query Frame = 2 Query: 689 PKGKGCPHSSEDSCKCYICATRLTGTIDLQSGILH-AEEXDXKLLIAIXFE 838 PK + S+ + C +L T+D+QSGI+H AEE D K + +E Sbjct: 184 PKARAALTSARTTANAIYCPPKLQATLDMQSGIIHAAEEKDWKTAYSYFYE 234
BLAST of EY660145 vs. ExPASy Swiss-Prot
Match: RPN6_SCHPO (Probable 26S proteasome regulatory subunit rpn6 OS=Schizosaccharomyces pombe GN=rpn6 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 6.268e-24 Identity = 53/140 (37.86%), Postives = 83/140 (59.29%), Query Frame = 3 Query: 186 AKEASNPSDAISMLYRVLDDPSSSSEAL-RVKELAITELSDLLRQENRAQDLCNLLTQLRPFFSLIPKAKTAKIVRGIIDAVAKIPGTSELQIALCKEMVQWTRAEKRTFLRQRVEARLAALLMESREYTEALTLLTSLV 602 A ++++ AI + VL+ S E + +E A+T LSDL +ENR DL L+ Q RP + KAK+AKIVR +ID + + LQI + + ++W EKRTFLRQ +E +L +L ++ YT+A+ L+ +L+ Sbjct: 13 AVKSNDIEKAIDLYKEVLNKGVSKDEKVANEQEQALTNLSDLYVRENRHNDLAQLVQQSRPLMANFSKAKSAKIVRTLIDKFSGEKKSLPLQIEVANDCIKWAIKEKRTFLRQALETKLISLYYDNSSYTDAINLINTLL 152 HSP 2 Score: 40.817 bits (94), Expect = 6.268e-24 Identity = 19/54 (35.19%), Postives = 29/54 (53.70%), Query Frame = 2 Query: 677 IKKPPKGKGCPHSSEDSCKCYICATRLTGTIDLQSGILHAEEXDXKLLIAIXFE 838 I+ PK + +++ S C L G +DLQSGILHA++ D K + +E Sbjct: 178 IRNIPKARASLTAAKTSANAVYCPPMLQGNLDLQSGILHADDMDFKTAYSYFYE 231
BLAST of EY660145 vs. ExPASy Swiss-Prot
Match: PSD11_DICDI (26S proteasome non-ATPase regulatory subunit 11 OS=Dictyostelium discoideum GN=psmD11 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 9.320e-22 Identity = 52/143 (36.36%), Postives = 75/143 (52.45%), Query Frame = 3 Query: 183 QAKEASNPSD---AISMLYRVLDDPSSSSEALRVKELAITELSDLLRQENRAQDLCNLLTQLRPFFSLIPKAKTAKIVRGIIDAVAKIPGTSELQIALCKEMVQWTRAEKRTFLRQRVEARLAALLMESREYTEALTLLTSLV 602 Q +E N D AI ++L S + +KE AI L+ L + + L LL +RPFF I K KT KIVR ID + +P I KE +QW + R +LRQR+E +L L+ E+++Y AL+ LT+L+ Sbjct: 6 QLEEIGNCQDSNKAIQDYNKILTIQESPDD---IKEEAILRLAKLFVKIGKGDQLPTLLRSVRPFFDKISKPKTDKIVRNFIDIFSTVPDNLTTLIEFVKENIQWCKDTNRIYLRQRLETKLFTLMFEAKDYANALSGLTTLL 145 HSP 2 Score: 41.9726 bits (97), Expect = 9.320e-22 Identity = 20/54 (37.04%), Postives = 28/54 (51.85%), Query Frame = 2 Query: 677 IKKPPKGKGCPHSSEDSCKCYICATRLTGTIDLQSGILHAEEXDXKLLIAIXFE 838 +K PK + S+ + C +L ID+QSGILH+EE D K + FE Sbjct: 171 LKNIPKARAALTSARTNANTIYCPPKLQAEIDMQSGILHSEEKDYKTAFSYFFE 224
BLAST of EY660145 vs. ExPASy Swiss-Prot
Match: RPN6_YEAST (26S proteasome regulatory subunit RPN6 OS=Saccharomyces cerevisiae GN=RPN6 PE=1 SV=3) HSP 1 Score: 59.3066 bits (142), Expect = 2.040e-12 Identity = 34/143 (23.78%), Postives = 70/143 (48.95%), Query Frame = 3 Query: 207 SDAISMLYRVLDDPSSSSEAL----------RVKELAITELSDLLRQENRAQDLCNLLTQLRPFFSLIPKAKTAKIVRGIIDAVAKIPGTSELQIALCKEMVQWTRAEKRTFLRQRVEARLAALLMESREYTEALTLLTSLVK 605 ++A + +LD SS S A +E +I EL L L + + K+KT K+++ +I+ ++P + + QI +C++ +++ + EKR FL+ + +LA L + ++Y ++L L+ L++ Sbjct: 21 NEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLR 163 HSP 2 Score: 34.2686 bits (77), Expect = 2.040e-12 Identity = 16/49 (32.65%), Postives = 23/49 (46.94%), Query Frame = 2 Query: 692 KGKGCPHSSEDSCKCYICATRLTGTIDLQSGILHAEEXDXKLLIAIXFE 838 K K ++ + C T+ +DL SGILH E+ D K + FE Sbjct: 193 KSKASLTAARTAANSIYCPTQTVAELDLMSGILHCEDKDYKTAFSYFFE 241 The following BLAST results are available for this feature:
BLAST of EY660145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY660145 ID=EY660145; Name=EY660145; organism=Citrus sinensis; type=EST; length=899bpback to top |