EY705680

Overview
NameEY705680
Unique NameEY705680
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length796
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY705680 vs. ExPASy Swiss-Prot
Match: NEP1_NEPGR (Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.700e-11
Identity = 46/151 (30.46%), Postives = 73/151 (48.34%), Query Frame = 2 
Query:   17 RLDIPATAFHPDAS-GSGQTIVDSGSEFTYLVDVAYNKIKEEIVRLAGPRMKKGYVYGGVADMCFDGNAMEVGRLIGDMVFEFERGVEILIEKERVLADVGGGVHCVGIGRSEMLGLASNIFGNFHQQNLWVEFDLASRRVGFAKAECSRS 466
            RL I  +AF  +++ G+G  I+DSG+  TY V+ AY  +++E +      +  G   G   D+CF   +      I   V  F+ G ++ +  E        G+ C+ +G S       +IFGN  QQN+ V +D  +  V FA A+C  S
Sbjct:  293 RLPIDPSAFALNSNNGTGGIIIDSGTTLTYFVNNAYQSVRQEFISQINLPVVNGSSSG--FDLCFQTPSDPSNLQIPTFVMHFDGG-DLELPSENYFISPSNGLICLAMGSSSQ---GMSIFGNIQQQNMLVVYDTGNSVVSFASAQCGAS 437
The following BLAST results are available for this feature:
BLAST of EY705680 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
NEP1_NEPGR4.700e-1130.46Aspartic proteinase nepenthesin-1 OS=Nepenthes gra... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-046-E09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY705680 ID=EY705680; Name=EY705680; organism=Citrus sinensis; type=EST; length=796bp
CCACGCGTCCGGCAAAAGACTGGATATTCCAGCCACGGCTTTCCACCCGG
ATGCTAGCGGGTCGGGTCAGACCATCGTCGATTCGGGATCCGAGTTCACT
TACTTGGTGGACGTGGCTTATAATAAAATTAAAGAAGAAATCGTGAGGCT
CGCGGGACCCAGGATGAAGAAGGGGTACGTGTACGGTGGAGTAGCCGACA
TGTGTTTCGATGGAAATGCGATGGAGGTCGGGCGGTTGATAGGCGACATG
GTATTCGAATTTGAGAGAGGCGTGGAGATTCTGATTGAAAAAGAAAGAGT
ATTAGCTGATGTCGGTGGTGGGGTCCACTGCGTGGGGATTGGACGGTCGG
AAATGCTCGGGCTAGCAAGTAATATTTTCGGGAATTTTCACCAGCAGAAT
CTGTGGGTGGAATTTGATCTTGCCAGCAGGAGGGTGGGTTTTGCTAAGGC
TGAGTGTAGCAGATCAGCGTAGAGACGGGGGGCTGGATTACCTATGTTCA
CGGGCGGGGACCTGATCTATAAGATATTTTTCCTTGAATGTGGTACAGAG
AACATCTGGGTGGGCCCTCTCTGGGGGGTCCGTATGCCAGGCGGGGATTT
AGTGTGAGCGGGACAGTTTATAATGATGGATAGTGTGTTGCCCTCGTTCA
TAACTGTTGTTGAGGCCCCCAGGCCTTGAGAAGCGGGGGTCCGCGGCTGG
GACGGGACACAGAGGGCGTACGAAGTGCGGATAGCAAGAGAGGTAGTGTG
GCGAGCGTCGGGCTTTGAGCAGTGTGGGGGGTGGTGTTGGTTTTGT
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