EY659486
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659486 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.121e-22 Identity = 69/204 (33.82%), Postives = 107/204 (52.45%), Query Frame = 1 Query: 133 DGSLTRH-NKF--PTVPPSASITDQLALSKDVPLNPQNKTFLRLFKPKDI---PPNTKL---------PLIIYFHGGGYILFSADAFIFHNSCCQLAAFIPALILSVDYRLAPEHRLPAAFDDAMESIQWVRDQALGDPWLRDYADLS-KCFLMGSSSGGGIAYHAGLRALDLDADHLSPVKIVXLVLNQPFFGGVXETEIEKR 696 DG+ RH +F VP +A+ + + S DV ++ Q R+++P D P T L P+I++FHGG + SA++ I+ C +L A+++SV+YR APE+R P A+DD ++WV + WLR D + FL G SSGG I ++ +RA++ S + ++ +L P FGG TE EKR Sbjct: 38 DGTFNRHLAEFLDRKVPANANPVNGV-FSFDVIIDRQTNLLSRVYRPADAGTSPSITDLQNPVDGEIVPVIVFFHGGSFAHSSANSAIYDTLCRRLVGLCGAVVVSVNYRRAPENRYPCAYDDGWAVLKWVNSSS----WLRSKKDSKVRIFLAGDSSGGNIVHNVAVRAVE------SRIDVLGNILLNPMFGGTERTESEKR 230 HSP 2 Score: 26.1794 bits (56), Expect = 1.121e-22 Identity = 9/21 (42.86%), Postives = 12/21 (57.14%), Query Frame = 3 Query: 732 DLMWDLSVPKGADRDHEYCXP 794 D W +P+G DR+H C P Sbjct: 243 DWYWRAFLPEGEDREHPACSP 263
BLAST of EY659486 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.702e-21 Identity = 55/144 (38.19%), Postives = 80/144 (55.56%), Query Frame = 1 Query: 268 DIPPNTKLPLIIYFHGGGYILFSADAFIFHNSCCQLAAFIPALILSVDYRLAPEHRLPAAFDDAMESIQWVRDQALGDPWLRDYADL-SKCFLMGSSSGGGIAYHAGLRALDLDADHLSPVKIVXLVLNQPFFGGVXETEIEKR 696 D P P+II+FHGG ++ SA + I+ + C + +++SV+YR APEHR P A+DD +++WV Q P++R D ++ FL G SSGG IA+H +RA D VK+ +L FGG TE E+R Sbjct: 106 DAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMSQ----PFMRSGGDAQARVFLSGDSSGGNIAHHVAVRAAD------EGVKVCGNILLNAMFGGTERTESERR 239
BLAST of EY659486 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.457e-21 Identity = 53/150 (35.33%), Postives = 83/150 (55.33%), Query Frame = 1 Query: 247 LRLFKPKDIPPNTKLPLIIYFHGGGYILFSADAFIFHNSCCQLAAFIPALILSVDYRLAPEHRLPAAFDDAMESIQWVRDQALGDPWLRDYADLS-KCFLMGSSSGGGIAYHAGLRALDLDADHLSPVKIVXLVLNQPFFGGVXETEIEK 693 L L KP + +P++I+FHGG + SA++ I+ C +L +++SVDYR +PEHR P A+DD ++ WV+ + WL+ D + +L G SSGG IA++ +RA + VK++ +L P FGG T+ EK Sbjct: 94 LELTKP--LSTTEIVPVLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVVVSVDYRRSPEHRYPCAYDDGWNALNWVKSRV----WLQSGKDSNVYVYLAGDSSGGNIAHNVAVRATN------EGVKVLGNILLHPMFGGQERTQSEK 231 HSP 2 Score: 28.4906 bits (62), Expect = 4.457e-21 Identity = 11/26 (42.31%), Postives = 13/26 (50.00%), Query Frame = 3 Query: 732 DLMWDLSVPKGADRDHEYCXPIASVG 809 D W +P+G DRDH C P G Sbjct: 245 DWYWRAYLPEGEDRDHPACNPFGPRG 270
BLAST of EY659486 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.361e-19 Identity = 55/155 (35.48%), Postives = 83/155 (53.55%), Query Frame = 1 Query: 232 QNKTFLRLFKPKDIPPNTKLPLIIYFHGGGYILFSADAFIFHNSCCQLAAFIPALILSVDYRLAPEHRLPAAFDDAMESIQWVRDQALGDPWLRDYADLS-KCFLMGSSSGGGIAYHAGLRALDLDADHLSPVKIVXLVLNQPFFGGVXETEIEK 693 Q + L L KP D +P+I++FHGG + SA++ I+ C +L +++SV+YR APE+ P A+DD ++ WV ++ WL+ D FL G SSGG IA++ LRA + S + ++ +L P FGG TE EK Sbjct: 90 QPPSILDLEKPVD---GDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWVNSRS----WLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGE------SGIDVLGNILLNPMFGGNERTESEK 231 HSP 2 Score: 27.7202 bits (60), Expect = 1.361e-19 Identity = 10/26 (38.46%), Postives = 14/26 (53.85%), Query Frame = 3 Query: 732 DLMWDLSVPKGADRDHEYCXPIASVG 809 D W +P+G DR+H C P + G Sbjct: 245 DWYWKAFLPEGEDREHPACNPFSPRG 270 The following BLAST results are available for this feature:
BLAST of EY659486 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659486 ID=EY659486; Name=EY659486; organism=Citrus sinensis; type=EST; length=892bpback to top |