EY659478
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659478 vs. ExPASy Swiss-Prot
Match: SIZ1_ORYSJ (E3 SUMO-protein ligase SIZ1 OS=Oryza sativa subsp. japonica GN=SIZ1 PE=1 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 2.602e-51 Identity = 116/259 (44.79%), Postives = 157/259 (60.62%), Query Frame = 3 Query: 78 SGSRIRVAGRFKPCVHTGCFDLETFVELNQRTRKWQCPICMKNYSLEDLIIDPYFHRITTMMRNFADDLTEIEVKHDGSWRVKCKGENNNLAEWHSPDGSTYAARSEVV-----SNSXTKQLVNSGQ-TIIARIKKNLSANVDVSKYWSTSPNKHMSYHVENNS-----EKIITMSSSASGCSRDEEDPTVNQDTNSRKD--LNDIPHRIDPI---FGTGNQTDG----PIGDTDIIVLSDSEEEYDHL-APSTSYSPT 791 SGSR+R+AGRFKPC+H GCFDLETFVELNQR+RKWQCPIC+KNYSLE L+IDPYF+RIT+++RN +D+ E++VK DGSWRVK + L++WH PDG+ + +V N + + GQ ++ IK+N + +VS + ++NNS I+ MS+S + RD EDP+VNQ++N D LN+ + D FG TD TD+IVLSDS+EE D + P Y T Sbjct: 367 SGSRMRIAGRFKPCIHMGCFDLETFVELNQRSRKWQCPICLKNYSLESLMIDPYFNRITSLLRNCNEDVNEVDVKPDGSWRVKGDAASRELSQWHMPDGTLCNPKEDVKPAMQNGNEQMMEGTSDGQKSLKIGIKRNPNGIWEVSSKADDKKPSVVGNRMQNNSGFRALNNIMHMSNSPTSSYRDGEDPSVNQESNRHVDLSLNNGNNEFDSFSLNFGQACNTDDRPQQQHNATDVIVLSDSDEENDAMVCPPAVYDNT 625
BLAST of EY659478 vs. ExPASy Swiss-Prot
Match: SIZ1_ARATH (E3 SUMO-protein ligase SIZ1 OS=Arabidopsis thaliana GN=SIZ1 PE=1 SV=2) HSP 1 Score: 193.356 bits (490), Expect = 1.579e-48 Identity = 113/261 (43.30%), Postives = 160/261 (61.30%), Query Frame = 3 Query: 75 MSGSRIRVAGRFKPCVHTGCFDLETFVELNQRTRKWQCPICMKNYSLEDLIIDPYFHRITTMMRNFADDLTEIEVKHDGSWRVKCKGEN-----NNLAEWHSPDGSTYAARSEVVSNSXTKQLVNSGQT-----IIARIKKNLSANVDVSK-----YWSTSPNKHMSYHVENNSEKIITMSSSASGCSRDEEDPTVNQDTNSRKD-------LNDIPHRIDPIFGTGNQT-DGPIGDTDIIVLSDSEEEYD-HLAPSTSYS 785 MSGSRI+VAGRF PCVH GCFDL+ FVELNQR+RKWQCPIC+KNYS+E +I+DPYF+RIT+ M++ +++TEIEVK DGSWRVK K E+ L++WH+PDGS + ++ + G + + I+KN + +VSK S++ + + Y +N II MSSSA+G RD +D +VNQD D L+ I +D + ++ G G+ ++IVLSDS++E D + P +YS Sbjct: 365 MSGSRIKVAGRFLPCVHMGCFDLDVFVELNQRSRKWQCPICLKNYSVEHVIVDPYFNRITSKMKHCDEEVTEIEVKPDGSWRVKFKRESERRELGELSQWHAPDGSLCPSAVDIKRKMEMLPVKQEGYSDGPAPLKLGIRKNRNGIWEVSKPNTNGLSSSNRQEKVGYQEKN----IIPMSSSATGSGRDGDDASVNQDAIGTFDFVANGMELDSISMNVDSGYNFPDRNQSGEGGNNEVIVLSDSDDENDLVITPGPAYS 621
BLAST of EY659478 vs. ExPASy Swiss-Prot
Match: SIZ2_ORYSJ (E3 SUMO-protein ligase SIZ2 OS=Oryza sativa subsp. japonica GN=SIZ2 PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 3.526e-40 Identity = 98/239 (41.00%), Postives = 148/239 (61.92%), Query Frame = 3 Query: 75 MSGSRIRVAGRFKPCVHTGCFDLETFVELNQRTRKWQCPICMKNYSLEDLIIDPYFHRITTMMRNFADDLTEIEVKHDGSWRVKCKGENNNLAEWHSPDGSTYA---ARSE----VVSNSXTKQLVN--SGQTIIARIKKNLSANVDVSKYWSTSPNKHMSYHVENNSEKIITMSSSASGCSR----DEEDPTVNQDTNSRKDLNDIPHRIDPIFGTGNQTDGPIGDTDIIVLSDSEEE 752 M+GSRI++AGRFKPCVH GCFDLE FVELNQR+RKWQCPIC+KNYSL+++IIDPYF+RIT ++++ DD++EI+VK DGSWRVK E LA+WH PDG+ RS+ +V ++ ++ +G + I++N + +++K S N Y + N +++ S++ S+ + E +Q T++ DL+ P +D F + D+IVLSDS+++ Sbjct: 376 MTGSRIKIAGRFKPCVHMGCFDLEAFVELNQRSRKWQCPICLKNYSLDNIIIDPYFNRITALVQSCGDDVSEIDVKPDGSWRVKGGAELKGLAQWHLPDGTLCMPTDTRSKPNIRIVKQEIKEEPLSEETGGRLKLGIRRNNNGQWEINKRLD-SNNGQNGYIEDENC--VVSASNTDDENSKNGIYNPEPGQFDQLTSNIYDLDSSP--MDAHFPPAPT------EQDVIVLSDSDDD 603 The following BLAST results are available for this feature:
BLAST of EY659478 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659478 ID=EY659478; Name=EY659478; organism=Citrus sinensis; type=EST; length=915bpback to top |