EY705311
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS_BETVE (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1) HSP 1 Score: 249.21 bits (635), Expect = 7.312e-70 Identity = 118/151 (78.15%), Postives = 134/151 (88.74%), Query Frame = 1 Query: 100 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQK 552 MA SMISSATVA +RAS AQ+SMVAPFT LKS+SAFP T+KTNNDITSIASNGGRVQCM+VWPP GLKKFETLSYLPPLS E L KE++YL+R IPCLEFELE G+VYREH++SPGYYDGRYWTMWKLPM+GC D++QVLKE+ E +K Sbjct: 1 MACSMISSATVAAVSRASPAQSSMVAPFTCLKSTSAFPVTQKTNNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEFELEHGFVYREHNRSPGYYDGRYWTMWKLPMFGCNDSSQVLKELEECKK 151 HSP 2 Score: 32.7278 bits (73), Expect = 7.312e-70 Identity = 15/18 (83.33%), Postives = 16/18 (88.89%), Query Frame = 2 Query: 590 HKRQVQCISFIAAKPPGV 643 +KRQVQ ISFIA KPPGV Sbjct: 165 NKRQVQIISFIAYKPPGV 182 HSP 3 Score: 25.409 bits (54), Expect = 7.312e-70 Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 3 Query: 555 YPHSFVRIIGFD 590 YP +F+RIIGFD Sbjct: 153 YPSAFIRIIGFD 164
BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS_FAGCR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Fagus crenata GN=RBCS1 PE=2 SV=1) HSP 1 Score: 252.292 bits (643), Expect = 1.585e-69 Identity = 119/151 (78.81%), Postives = 136/151 (90.07%), Query Frame = 1 Query: 100 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQK 552 MASSMISSATVAT +RA+ AQA+MVAPFTGLKS++AFPAT+K+NNDITS+ASNGGRVQCMKVWPP GL+KFETLSYLPPLS E+L K+I YLI GWIPCLEFELE +VYRE+++SPGYYDGRYW MWKLPM+GCTDATQVL E+ E K Sbjct: 1 MASSMISSATVATVSRATPAQATMVAPFTGLKSTAAFPATRKSNNDITSLASNGGRVQCMKVWPPLGLQKFETLSYLPPLSIESLAKQIEYLILKGWIPCLEFELEHPFVYRENNRSPGYYDGRYWVMWKLPMFGCTDATQVLAELQEASK 151 HSP 2 Score: 32.7278 bits (73), Expect = 1.585e-69 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 2 Query: 590 HKRQVQCISFIAAKPP 637 +KRQVQCISFIA KPP Sbjct: 165 NKRQVQCISFIAYKPP 180
BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS_LACSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 1.585e-69 Identity = 113/147 (76.87%), Postives = 129/147 (87.76%), Query Frame = 1 Query: 115 ISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKD 555 ISS+ +AT NR + QAS+ APFTGLKS+ AFP TKK NND +S+ SNGGRVQCMKVWPP GLKK+ETLSYLPPLSDEAL KEI+YLIR+ WIPCLEFELE G+VYREHH SPGYYDGRYWTMWKLPM+GCTD+ QV+KEVGE +K+ Sbjct: 4 ISSSAIATVNRTTSTQASLAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKE 150 HSP 2 Score: 35.039 bits (79), Expect = 1.585e-69 Identity = 15/16 (93.75%), Postives = 15/16 (93.75%), Query Frame = 2 Query: 596 RQVQCISFIAAKPPGV 643 RQVQCISFI AKPPGV Sbjct: 165 RQVQCISFIVAKPPGV 180
BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS_MANES (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Manihot esculenta PE=2 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 3.208e-67 Identity = 114/151 (75.50%), Postives = 130/151 (86.09%), Query Frame = 1 Query: 100 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQK 552 MASSM+S+ATVA+ NR S AQA+MVAPFTGLKS+ FP T+KTN+DITSI SNGG+VQCMKVWP G+KKFETLSYLPPL+ E L E+ YL+RSGWIPCLEFELE G VYREH + PGYYDGRYWTMWKLPM+GCTDA QVLKE+ E+ K Sbjct: 1 MASSMLSTATVASINRVSPAQATMVAPFTGLKSTPVFPTTRKTNSDITSITSNGGKVQCMKVWPTLGMKKFETLSYLPPLTREQLASEVEYLLRSGWIPCLEFELEHGLVYREHARVPGYYDGRYWTMWKLPMFGCTDAAQVLKELDELIK 151 HSP 2 Score: 31.9574 bits (71), Expect = 3.208e-67 Identity = 13/15 (86.67%), Postives = 14/15 (93.33%), Query Frame = 2 Query: 596 RQVQCISFIAAKPPG 640 RQVQCISF+A KPPG Sbjct: 167 RQVQCISFLAYKPPG 181
BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS_PYRPY (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Pyrus pyrifolia GN=RBCS PE=2 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 7.113e-67 Identity = 118/153 (77.12%), Postives = 136/153 (88.89%), Query Frame = 1 Query: 100 MASSMISSATVAT--ANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQK 552 MASSMISS TVAT A+R + AQA MVAPF GLKSSSAFP T+K+N DITSIASNGGRVQCM+VWPP GLKKFETLSYLPPLS E+L KE++YL+R W+PCLEFELE G+VYRE+H+SPGYYDGRYWTMWKLPM+GCTD++QVLKE+ E +K Sbjct: 1 MASSMISSGTVATVSADRPAPAQARMVAPFNGLKSSSAFPVTRKSN-DITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSESLAKEVDYLLRKNWVPCLEFELETGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKELEEAKK 152 HSP 2 Score: 29.6462 bits (65), Expect = 7.113e-67 Identity = 13/28 (46.43%), Postives = 19/28 (67.86%), Query Frame = 3 Query: 555 YPHSFVRIIGFDT--SVKCSASVSLLPS 632 YP SF+RIIGFD V+C + ++ P+ Sbjct: 154 YPQSFIRIIGFDNVRQVQCISFIAYKPA 181
BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS_HEVBR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Hevea brasiliensis GN=RBCS PE=2 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 9.276e-67 Identity = 115/151 (76.16%), Postives = 131/151 (86.75%), Query Frame = 1 Query: 100 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQK 552 MASSM+S+A VA NRAS AQASMVAPFTGLKS+SAFP T+KT DITSIASNGGRVQCM+VWPP G K +ETLSYLPPL+ E L KE+ YL+R GW+PCLEFELE G VYRE+H+SPGYYDGRYWTMWKLPM+GCTDA QVL+E+ E+ K Sbjct: 1 MASSMLSTAAVACINRASPAQASMVAPFTGLKSTSAFPTTRKTTTDITSIASNGGRVQCMQVWPPRGKKFYETLSYLPPLTREQLAKEVEYLLRKGWVPCLEFELEHGTVYREYHRSPGYYDGRYWTMWKLPMFGCTDAVQVLQELDEMIK 151 HSP 2 Score: 28.8758 bits (63), Expect = 9.276e-67 Identity = 12/15 (80.00%), Postives = 13/15 (86.67%), Query Frame = 2 Query: 596 RQVQCISFIAAKPPG 640 RQVQCISF+A KP G Sbjct: 167 RQVQCISFLAYKPKG 181
BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS_MEDSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Medicago sativa PE=2 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 9.279e-67 Identity = 111/149 (74.50%), Postives = 132/149 (88.59%), Query Frame = 1 Query: 109 SMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKD 555 ++ISSA V T NRAS AQA++VAPFTGLKSS+ FP TKKTNNDITSIASNGGRV CM+VWPP G KKFETLSYLPPL++E L KE+ YLIR GWIPCLEFELEKG+VYRE+H+SPGYYDGRYWTMW+LP++G TD++QVLKE+ + + + Sbjct: 2 ALISSAAVTTVNRASSAQANLVAPFTGLKSSAGFPVTKKTNNDITSIASNGGRVNCMQVWPPVGKKKFETLSYLPPLTEEQLAKEVEYLIRKGWIPCLEFELEKGFVYRENHRSPGYYDGRYWTMWRLPLFGATDSSQVLKELADCKAE 150 HSP 2 Score: 28.8758 bits (63), Expect = 9.279e-67 Identity = 13/29 (44.83%), Postives = 19/29 (65.52%), Query Frame = 3 Query: 555 YPHSFVRIIGFDT--SVKCSASVSLLPSH 635 YP SF+RIIGFD V+C + ++ P + Sbjct: 151 YPDSFIRIIGFDNVRQVQCISFIAHTPKN 179
BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS_MALSP (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Malus sp. GN=RBCS PE=2 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 2.057e-66 Identity = 118/153 (77.12%), Postives = 136/153 (88.89%), Query Frame = 1 Query: 100 MASSMISSATVAT--ANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQK 552 MASSMISS TVAT A+R + AQA MVAPFTGLKSSSA P T+K+N DITSIASNGGRVQCM+VWPP GLKKFETLSYLPPLS E+L KE++YL+R W+PCLEFELE G+VYRE+H+SPGYYDGRYWTMWKLPM+GCTD++QVLKE+ E +K Sbjct: 1 MASSMISSGTVATVSADRPAPAQARMVAPFTGLKSSSASPVTRKSN-DITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSTESLAKEVDYLLRKNWVPCLEFELEHGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKELEEAKK 152 HSP 2 Score: 29.6462 bits (65), Expect = 2.057e-66 Identity = 13/28 (46.43%), Postives = 19/28 (67.86%), Query Frame = 3 Query: 555 YPHSFVRIIGFDT--SVKCSASVSLLPS 632 YP SF+RIIGFD V+C + ++ P+ Sbjct: 154 YPQSFIRIIGFDNVRQVQCISFIAYKPA 181
BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS3_SOLTU (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Solanum tuberosum GN=RBCS-3 PE=3 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 4.561e-66 Identity = 114/152 (75.00%), Postives = 136/152 (89.47%), Query Frame = 1 Query: 100 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNN-DITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQK 552 MASS++SSA VAT R+++AQASMVAPFTGLKS+++FP TKK NN DITS+ASNGGRV+CM+VWPP +KK+ETLSYLP LSDE LLKE+ YL+++GW+PCLEFE E G+VYRE+HKSPGYYDGRYWTMWKLPM+GCTDATQVL EV E +K Sbjct: 1 MASSIVSSAAVAT--RSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKK 150 HSP 2 Score: 29.6462 bits (65), Expect = 4.561e-66 Identity = 13/15 (86.67%), Postives = 13/15 (86.67%), Query Frame = 2 Query: 596 RQVQCISFIAAKPPG 640 RQVQCISFIA KP G Sbjct: 166 RQVQCISFIAYKPEG 180
BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS2A_SOLLC (Ribulose bisphosphate carboxylase small chain 2A, chloroplastic OS=Solanum lycopersicum GN=RBCS-2A PE=2 SV=2) HSP 1 Score: 240.35 bits (612), Expect = 4.974e-65 Identity = 114/151 (75.50%), Postives = 131/151 (86.75%), Query Frame = 1 Query: 100 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQK 552 MASS+ISSA VAT R+++ QASMVAPFTGLKSS+ FP TKK N DITSIASNGGRV CM+VWPP +KK+ETLSYLP LSDE LL EI YL+++GW+PCLEFE E G+VYRE++KSPGYYDGRYWTMWKLPM+GCTDATQVL EV E +K Sbjct: 1 MASSVISSAAVAT--RSNVTQASMVAPFTGLKSSATFPVTKKQNLDITSIASNGGRVSCMQVWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKK 149 HSP 2 Score: 29.6462 bits (65), Expect = 4.974e-65 Identity = 13/15 (86.67%), Postives = 13/15 (86.67%), Query Frame = 2 Query: 596 RQVQCISFIAAKPPG 640 RQVQCISFIA KP G Sbjct: 165 RQVQCISFIAYKPEG 179 The following BLAST results are available for this feature:
BLAST of EY705311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
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Sequences
The
following sequences are available for this feature:
EST sequence >EY705311 ID=EY705311; Name=EY705311; organism=Citrus sinensis; type=EST; length=944bpback to top |