EY676433
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBBA_ARATH (Riboflavin biosynthesis protein ribBA, chloroplastic OS=Arabidopsis thaliana GN=RIBBA PE=2 SV=2) HSP 1 Score: 192.586 bits (488), Expect = 2.967e-48 Identity = 100/188 (53.19%), Postives = 132/188 (70.21%), Query Frame = 3 Query: 21 DCPTEGFSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVFKEG*SH*GFCGFASVSWLGIQYLFYHLVVDPEDGSLSSIAYLKE 584 D PT GFSSI +A+ +RQGK V+VV+DE+ + EG+LVMAA L +P +AF+V+HG+GIV V MKE+DL+RL+LPLM + ENE+ FT+TVDAK GTTTGVSA DRA T+L+L+S DSKPE+F RPGH+FPLKYR GGV K ++ L + +V D DGS++ + L+E Sbjct: 122 DLPTPGFSSIPEAIEDIRQGKLVVVVDDEDRENEGDLVMAAQLATPEAMAFIVRHGTGIVCVSMKEDDLERLHLPLMVNQKENEEKLSTAFTVTVDAKHGTTTGVSARDRATTILSLASRDSKPEDFNRPGHIFPLKYREGGVLKRAGHTEASVDLTVLAGLDPVGVLCEIVDD--DGSMARLPKLRE 307
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBBA_NOCFA (Riboflavin biosynthesis protein ribBA OS=Nocardia farcinica GN=ribBA PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 8.640e-31 Identity = 62/139 (44.60%), Postives = 94/139 (67.63%), Query Frame = 3 Query: 39 FSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVFK 455 F +IE+A+ + GK V+VV+DE+ + EG+L+ AA +P VAFM+++ SG + V + ED RL LP M A N+D G +T++VDA+ G TTG+SA+DRA T+ L+ D+K ++ RPGHV PL+ ++GGV + Sbjct: 4 FDTIERAVADIAAGKAVVVVDDEDRENEGDLIFAAEKATPELVAFMIRYTSGYICVPLTGEDCDRLGLPPMY--ATNQDKHGTAYTVSVDAREGITTGISAADRATTMRLLADADAKADDLTRPGHVVPLRAKDGGVLR 140 HSP 2 Score: 31.9574 bits (71), Expect = 8.640e-31 Identity = 17/30 (56.67%), Postives = 20/30 (66.67%), Query Frame = 1 Query: 445 GFLRRASHTEASVDLLVLAGLESS--ICSI 528 G LRR HTEA+VDL +AGL + IC I Sbjct: 137 GVLRRPGHTEAAVDLARMAGLRPAGVICEI 166
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBBA_SALTO (Riboflavin biosynthesis protein ribBA OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=ribBA PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 1.126e-30 Identity = 61/139 (43.88%), Postives = 92/139 (66.19%), Query Frame = 3 Query: 39 FSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVFK 455 F +IEQA+ + G+ V+VV+D N + EG+L+ AA L +P VAFMV++ SG + + E+D RL+LP M N+D G + +TVDA+ G +TG+SA+DRA+ + L+ P + P++ RPGHV PL+ R GGV + Sbjct: 4 FGTIEQAMAEILAGRPVVVVDDANRENEGDLIFAAELATPELVAFMVRYTSGYICASLTEDDCDRLDLPPM--HHTNQDRRGTAYMVTVDARKGVSTGISAADRARVIRLLADPSTTPDDLARPGHVVPLRAREGGVLR 140 HSP 2 Score: 30.0314 bits (66), Expect = 1.126e-30 Identity = 14/21 (66.67%), Postives = 15/21 (71.43%), Query Frame = 1 Query: 445 GFLRRASHTEASVDLLVLAGL 507 G LRR HTEA+ DL LAGL Sbjct: 137 GVLRRTGHTEAATDLTRLAGL 157
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBBA_MYCGI (Riboflavin biosynthesis protein ribBA OS=Mycobacterium gilvum (strain PYR-GCK) GN=ribBA PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 5.482e-30 Identity = 62/137 (45.26%), Postives = 91/137 (66.42%), Query Frame = 3 Query: 45 SIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVFK 455 S+E+A+ + GK V+V++DE+ + EG+L+ AA +P VAFMV++ SG + V + E RL L M A N+D G +T+TVDAK G TG+SASDRA T+ L+ PDS ++F +PGHV PL+ ++GGV + Sbjct: 6 SVERAVADIAAGKAVVVIDDEDRENEGDLIFAAEKATPELVAFMVRYTSGYLCVPLAGEICDRLGLLPMY--AVNQDKHGTAYTVTVDAKVGVGTGISASDRATTMRLLADPDSVADDFTKPGHVVPLRAKDGGVLR 140 HSP 2 Score: 34.2686 bits (77), Expect = 5.482e-30 Identity = 18/30 (60.00%), Postives = 22/30 (73.33%), Query Frame = 1 Query: 445 GFLRRASHTEASVDLLVLAGLES--SICSI 528 G LRR HTEA+VDL LAGL++ +IC I Sbjct: 137 GVLRRPGHTEAAVDLARLAGLQAAGTICEI 166
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBBA_CORGL (Riboflavin biosynthesis protein ribBA OS=Corynebacterium glutamicum GN=ribBA PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 1.576e-29 Identity = 62/135 (45.93%), Postives = 93/135 (68.89%), Query Frame = 3 Query: 45 SIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGV 449 S+E+A+ + GK V+VV+DE+ + EG+++ AA L +P VAFMV++ SG + + +D RL+LP M+ A N+D+ G +T+TVDA G TTG+SA+DRA T+ L+ P++ +F RPGHV PL+ R GGV Sbjct: 13 SVEEAIADIAAGKAVVVVDDEDRENEGDIIFAAELATPELVAFMVRYSSGYICAPLTAKDADRLDLPPMT--AHNQDARGTAYTVTVDANTG-TTGISATDRAHTLRLLADPEADRTDFTRPGHVVPLRAREGGV 144 HSP 2 Score: 29.261 bits (64), Expect = 1.576e-29 Identity = 16/30 (53.33%), Postives = 19/30 (63.33%), Query Frame = 1 Query: 445 GFLRRASHTEASVDLLVLAGLESS--ICSI 528 G L RA HTEA+VDL AGL + IC + Sbjct: 143 GVLVRAGHTEAAVDLARAAGLRPAGVICEV 172
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBBA_CORGB (Riboflavin biosynthesis protein ribBA OS=Corynebacterium glutamicum (strain R) GN=ribBA PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 1.576e-29 Identity = 62/135 (45.93%), Postives = 93/135 (68.89%), Query Frame = 3 Query: 45 SIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGV 449 S+E+A+ + GK V+VV+DE+ + EG+++ AA L +P VAFMV++ SG + + +D RL+LP M+ A N+D+ G +T+TVDA G TTG+SA+DRA T+ L+ P++ +F RPGHV PL+ R GGV Sbjct: 13 SVEEAIADIAAGKAVVVVDDEDRENEGDIIFAAELATPELVAFMVRYSSGYICAPLTAKDADRLDLPPMT--AHNQDARGTAYTVTVDANTG-TTGISATDRAHTLRLLADPEADRTDFTRPGHVVPLRAREGGV 144 HSP 2 Score: 29.261 bits (64), Expect = 1.576e-29 Identity = 16/30 (53.33%), Postives = 19/30 (63.33%), Query Frame = 1 Query: 445 GFLRRASHTEASVDLLVLAGLESS--ICSI 528 G L RA HTEA+VDL AGL + IC + Sbjct: 143 GVLVRAGHTEAAVDLARAAGLRPAGVICEV 172
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBBA_AQUAE (Riboflavin biosynthesis protein ribBA OS=Aquifex aeolicus GN=ribBA PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 3.085e-29 Identity = 67/141 (47.52%), Postives = 96/141 (68.09%), Query Frame = 3 Query: 39 FSSIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSCGPTFTITVDA--KFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVFK 455 F+++E+A+ +RQGK VIVV+D + + EG+LVMAA +P + FM K+G G++ + + E ++L+L M+P N D G F +++DA K GTTTG+SA DRA T+ SPD+KP +F RPGHVFPLK R GGV + Sbjct: 9 FNTVEEAIEDIRQGKMVIVVDDPDRENEGDLVMAAEKVTPEAINFMAKYGRGLICLSLTPERCEQLDLHPMTP--MNTDPKGTYFCVSIDAHPKHGTTTGISAYDRALTIKLAISPDAKPSDFVRPGHVFPLKARPGGVLE 147
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBBA_MYCUA (Riboflavin biosynthesis protein ribBA OS=Mycobacterium ulcerans (strain Agy99) GN=ribBA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.693e-28 Identity = 63/137 (45.99%), Postives = 89/137 (64.96%), Query Frame = 3 Query: 45 SIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVFK 455 S+E+A+ + GK VIV++DE+ + EG+L+ AA +P VAFMV++ SG + V + RL L M A N+D G +T+TVDAK G TG+SASDRA T+ L+ P S E+F RPGHV PL+ ++GGV + Sbjct: 6 SVERAVADIGAGKAVIVIDDEDRENEGDLIFAAEKATPELVAFMVRYTSGYLCVPLDGAVCDRLGLLPMY--AVNQDKHGTAYTVTVDAKNGVGTGISASDRATTMRLLADPASVAEDFTRPGHVVPLRAKDGGVLR 140 HSP 2 Score: 33.113 bits (74), Expect = 1.693e-28 Identity = 17/30 (56.67%), Postives = 21/30 (70.00%), Query Frame = 1 Query: 445 GFLRRASHTEASVDLLVLAGLE--SSICSI 528 G LRR HTEA+VDL +AGL+ +IC I Sbjct: 137 GVLRRPGHTEAAVDLARMAGLQPAGAICEI 166
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBBA_MYCMM (Riboflavin biosynthesis protein ribBA OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=ribBA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.693e-28 Identity = 63/137 (45.99%), Postives = 89/137 (64.96%), Query Frame = 3 Query: 45 SIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVFK 455 S+E+A+ + GK VIV++DE+ + EG+L+ AA +P VAFMV++ SG + V + RL L M A N+D G +T+TVDAK G TG+SASDRA T+ L+ P S E+F RPGHV PL+ ++GGV + Sbjct: 6 SVERAVADIGAGKAVIVIDDEDRENEGDLIFAAEKATPELVAFMVRYTSGYLCVPLDGAVCDRLGLLPMY--AVNQDKHGTAYTVTVDAKNGVGTGISASDRATTMRLLADPASVAEDFTRPGHVVPLRAKDGGVLR 140 HSP 2 Score: 33.113 bits (74), Expect = 1.693e-28 Identity = 17/30 (56.67%), Postives = 21/30 (70.00%), Query Frame = 1 Query: 445 GFLRRASHTEASVDLLVLAGLE--SSICSI 528 G LRR HTEA+VDL +AGL+ +IC I Sbjct: 137 GVLRRPGHTEAAVDLARMAGLQPAGAICEI 166
BLAST of EY676433 vs. ExPASy Swiss-Prot
Match: RIBBA_MYCVP (Riboflavin biosynthesis protein ribBA OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=ribBA PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 2.205e-28 Identity = 59/137 (43.07%), Postives = 90/137 (65.69%), Query Frame = 3 Query: 45 SIEQALNTLRQGKFVIVVEDENGDVEGNLVMAASLTSPRHVAFMVKHGSGIVSVGMKEEDLQRLNLPLMSPEAENEDSCGPTFTITVDAKFGTTTGVSASDRAKTVLALSSPDSKPENFRRPGHVFPLKYRNGGVFK 455 S+E+A+ + GK V+V++DE+ + EG+L+ AA +P VAFMV++ SG + V + + RL L M A N+D G +T+TVDAK G TG+SA DRA T+ L+ PD+ ++F +PGHV PL+ ++GGV + Sbjct: 6 SVERAVADIAAGKAVVVIDDEDRENEGDLIFAAEKATPELVAFMVRYTSGYLCVPLAGDICDRLGLLPMY--AVNQDKHGTAYTVTVDAKKGVGTGISAMDRATTMRLLADPDAVADDFTKPGHVVPLRAKDGGVLR 140 HSP 2 Score: 33.8834 bits (76), Expect = 2.205e-28 Identity = 18/30 (60.00%), Postives = 21/30 (70.00%), Query Frame = 1 Query: 445 GFLRRASHTEASVDLLVLAGLE--SSICSI 528 G LRR HTEA+VDL LAGL+ +IC I Sbjct: 137 GVLRRPGHTEAAVDLARLAGLQPAGAICEI 166 The following BLAST results are available for this feature:
BLAST of EY676433 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 237
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Sequences
The
following sequences are available for this feature:
EST sequence >EY676433 ID=EY676433; Name=EY676433; organism=Citrus sinensis; type=EST; length=979bpback to top |