EY675164
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY675164 vs. ExPASy Swiss-Prot
Match: PEL1_ARATH (Probable pectate lyase 1 OS=Arabidopsis thaliana GN=At1g04680 PE=2 SV=2) HSP 1 Score: 332.798 bits (852), Expect = 1.961e-90 Identity = 168/242 (69.42%), Postives = 185/242 (76.45%), Query Frame = 3 Query: 12 RNAIGRRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHDCKPTGNAMVRSSPTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITI----FKQSHDPPQ*GYAAGSQ*FLHQGQANASNHCLQPFWXXXXXXXXXXXXXXYFLVVDNDYTPWEKDALGGRATPTLQQPGEK 725 RNAIG RDGRFYVVTDPRDD+PVNP+PGTLRHAVIQD+PLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVI+HGLH+HDCKPTGNAMVRSS TH+GWRT+ADGDAISIFGSSH+WIDHNSLSHCADGLVDAVMGSTAITI ++ G++ A NH + YF VV+NDYT WE A+GG A PT+ G + Sbjct: 109 RNAIGGRDGRFYVVTDPRDDNPVNPRPGTLRHAVIQDRPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIVHGLHIHDCKPTGNAMVRSSETHFGWRTMADGDAISIFGSSHVWIDHNSLSHCADGLVDAVMGSTAITISNNHLTHHNEVMLLGHSDSYMRDKAMQVTIAYNH-----FGVGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNR 345 HSP 2 Score: 89.3521 bits (220), Expect = 3.793e-17 Identity = 53/110 (48.18%), Postives = 65/110 (59.09%), Query Frame = 1 Query: 436 LMDLLMPSWDLLPLPFSNNHMTHHNEVMLLGHSDSYTRDKQMQVTIAYNHFGKGIIQKMAR---GENLVIS---LWWTMTTLPGKRMPLVEGQ----PPPSNSPGKKKTR 735 L+D +M S + SNNH+THHNEVMLLGHSDSY RDK MQVTIAYNHFG G+IQ+M R G V++ W M + G P + Q P N K+ T+ Sbjct: 253 LVDAVMGS---TAITISNNHLTHHNEVMLLGHSDSYMRDKAMQVTIAYNHFGVGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYAAPKNPFAKEVTK 359
BLAST of EY675164 vs. ExPASy Swiss-Prot
Match: PEL15_ARATH (Probable pectate lyase 15 OS=Arabidopsis thaliana GN=At4g13710 PE=2 SV=1) HSP 1 Score: 320.472 bits (820), Expect = 1.007e-86 Identity = 160/242 (66.12%), Postives = 183/242 (75.62%), Query Frame = 3 Query: 12 RNAIGRRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHDCKPTGNAMVRSSPTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITI----FKQSHDPPQ*GYAAGSQ*FLHQGQANASNHCLQPFWXXXXXXXXXXXXXXYFLVVDNDYTPWEKDALGGRATPTLQQPGEK 725 RNAIG RDGRFY+VTDP D+D VNPKPGTLRHAVIQ++PLWIVFKRDMVI+LKQELI+NSFKTID RG+NVHIANG CITIQF+TNVIIHGLH+HDCKPTGNAMVRSSP+H+GWRT+ADGDA+SIFGSSHIWIDHNSLSHCADGLVDAVMGSTAIT+ F ++ G++ A NH + YF VV+NDYT WE A+GG A PT+ G + Sbjct: 150 RNAIGGRDGRFYIVTDPTDEDVVNPKPGTLRHAVIQEEPLWIVFKRDMVIELKQELIMNSFKTIDARGSNVHIANGACITIQFITNVIIHGLHIHDCKPTGNAMVRSSPSHFGWRTMADGDAVSIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITVSNNHFTHHNEVMLLGHSDSYTKDKLMQVTIAYNH-----FGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQGNR 386
BLAST of EY675164 vs. ExPASy Swiss-Prot
Match: PEL8_ARATH (Probable pectate lyase 8 OS=Arabidopsis thaliana GN=At3g07010 PE=2 SV=1) HSP 1 Score: 316.62 bits (810), Expect = 1.454e-85 Identity = 166/268 (61.94%), Postives = 193/268 (72.01%), Query Frame = 3 Query: 12 RNAIGRRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHDCKPTGNAMVRSSPTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITI----FKQSHDPPQ*GYAAGSQ*FLHQGQANASNHCLQPFWXXXXXXXXXXXXXXYFLVVDNDYTPWEKDALGGRATPTLQQPGEKKNKGPIECPFPKGGKKKR--GETNWQ 797 RNAIG RDGRFYVVTDP DDDPVNP PGTLRHAVIQD+PLWI+FKRDMVI LKQELI+NSFKTIDGRG NVHIANG C+TIQ+VTN+I+HG+HVHDCKPTGNAMVRSSP+HYG+R++ADGDAISIFGSSHIWIDHNSLS+CADGLVDAVM STAIT+ F ++ G++ A NH + YF VV+NDYT WE A+GG A PT+ G + P+ PF K K+ GE+ W+ Sbjct: 96 RNAIGGRDGRFYVVTDPGDDDPVNPIPGTLRHAVIQDEPLWIIFKRDMVITLKQELIMNSFKTIDGRGVNVHIANGACLTIQYVTNIIVHGIHVHDCKPTGNAMVRSSPSHYGFRSMADGDAISIFGSSHIWIDHNSLSNCADGLVDAVMSSTAITVSNNFFTHHNEVMLLGHSDSYTRDKVMQVTIAYNH-----FGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAGPTINSQG-NRFLAPVN-PFAKEVTKREYTGESKWK 356
BLAST of EY675164 vs. ExPASy Swiss-Prot
Match: PEL20_ARATH (Probable pectate lyase 20 OS=Arabidopsis thaliana GN=At5g48900 PE=2 SV=1) HSP 1 Score: 314.694 bits (805), Expect = 5.527e-85 Identity = 157/242 (64.88%), Postives = 182/242 (75.21%), Query Frame = 3 Query: 12 RNAIGRRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHDCKPTGNAMVRSSPTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITI----FKQSHDPPQ*GYAAGSQ*FLHQGQANASNHCLQPFWXXXXXXXXXXXXXXYFLVVDNDYTPWEKDALGGRATPTLQQPGEK 725 RNAIG RDGR+YVV+DP DD+PVNPKPGTLRHAVIQ++PLWIVFKRDMVI LK+ELI+NSFKTIDGRG NVHIANG CITIQFVTN+IIHG+H+HDC+PTGNAMVRSSP+HYGWRT+ADGD ISIFGSSHIWIDHNSLS+CADGL+DAVM STAITI F ++ G++ A NH + YF VV+NDYT WE A+GG A+PT+ G + Sbjct: 97 RNAIGGRDGRYYVVSDPNDDNPVNPKPGTLRHAVIQEEPLWIVFKRDMVITLKEELIMNSFKTIDGRGVNVHIANGACITIQFVTNIIIHGIHIHDCRPTGNAMVRSSPSHYGWRTMADGDGISIFGSSHIWIDHNSLSNCADGLIDAVMASTAITISNNYFTHHNEVMLLGHSDTYTRDKVMQVTIAYNH-----FGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTINSQGNR 333
BLAST of EY675164 vs. ExPASy Swiss-Prot
Match: PEL10_ARATH (Probable pectate lyase 10 OS=Arabidopsis thaliana GN=At3g24670 PE=2 SV=2) HSP 1 Score: 300.827 bits (769), Expect = 8.258e-81 Identity = 161/271 (59.41%), Postives = 188/271 (69.37%), Query Frame = 3 Query: 12 RNAIGRRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHDCKPTGNAMVRSSPTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITI----FKQSHDPPQ*GYAAGSQ*FLHQGQANASNHCLQPFWXXXXXXXXXXXXXXYFLVVDNDYTPWEKDALGGRATPTLQQPGEKKNKGPIECPFPKGGKKKRGETNWQPPWER 812 RNAIG RDGR+YVVTDP D D VNP+PGTLRHAVIQD+PLWIVFKRDMVI L QELI+NSFKTIDGRG NV IA G CITIQ+VTN+IIHG++VHDC+ TGNAMVRSSP+HYGWRT+ADGDAISIFGSSHIWIDHNSLS+CADGL+DA+MGSTAITI ++ G++ A NH + YF VV+NDYT W A+GG A PT+ G + P PF K K+ G +WQ W++ Sbjct: 120 RNAIGGRDGRYYVVTDPSDHDAVNPRPGTLRHAVIQDRPLWIVFKRDMVITLTQELIMNSFKTIDGRGVNVAIAGGACITIQYVTNIIIHGINVHDCRRTGNAMVRSSPSHYGWRTMADGDAISIFGSSHIWIDHNSLSNCADGLIDAIMGSTAITISNNYMTHHNEVMLMGHSDSYTRDKLMQVTIAYNH-----FGEGLIQRMPRCRHGYFHVVNNDYTHWVMYAIGGSANPTINSQG-NRFLAPGN-PFAKEVTKRVG--SWQGEWKQ 381
BLAST of EY675164 vs. ExPASy Swiss-Prot
Match: PEL14_ARATH (Putative pectate lyase 14 OS=Arabidopsis thaliana GN=At4g13210 PE=2 SV=1) HSP 1 Score: 296.975 bits (759), Expect = 1.193e-79 Identity = 148/242 (61.16%), Postives = 173/242 (71.49%), Query Frame = 3 Query: 12 RNAIGRRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHDCKPTGNAMVRSSPTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITI----FKQSHDPPQ*GYAAGSQ*FLHQGQANASNHCLQPFWXXXXXXXXXXXXXXYFLVVDNDYTPWEKDALGGRATPTLQQPGEK 725 RNA+G RDGR+Y+VTDP D DPV PKPGTLR+AVIQD+PLWIVFKRDMVI L QELI+NSFKTIDGRG NVHIA G C+T+Q+VTN+IIHG+++HDCK TGNAMVRSS +HYGWRT+ADGD ISIFGSSHIWIDHNSLS CADGL+DA+MGSTAITI ++ G+ A NH + YF VV+NDYT WE A+GG A PT+ G + Sbjct: 98 RNAVGGRDGRYYIVTDPSDHDPVTPKPGTLRYAVIQDEPLWIVFKRDMVITLSQELIMNSFKTIDGRGVNVHIAGGACLTVQYVTNIIIHGINIHDCKRTGNAMVRSSESHYGWRTMADGDGISIFGSSHIWIDHNSLSSCADGLIDAIMGSTAITISNNYLTHHNEAILLGHTDSYTRDKMMQVTIAYNH-----FGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNR 334 HSP 2 Score: 88.1965 bits (217), Expect = 8.451e-17 Identity = 48/103 (46.60%), Postives = 64/103 (62.14%), Query Frame = 1 Query: 436 LMDLLMPSWDLLPLPFSNNHMTHHNEVMLLGHSDSYTRDKQMQVTIAYNHFGKGIIQKMAR---GENLVIS---LWWTMTTLPGKRMPLVEGQPPPSNSPGKK 726 L+D +M S + SNN++THHNE +LLGH+DSYTRDK MQVTIAYNHFG+G+IQ+M R G V++ W M + G P + Q +PG + Sbjct: 242 LIDAIMGS---TAITISNNYLTHHNEAILLGHTDSYTRDKMMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPGNR 341
BLAST of EY675164 vs. ExPASy Swiss-Prot
Match: PEL18_ARATH (Probable pectate lyase 18 OS=Arabidopsis thaliana GN=At4g24780 PE=2 SV=2) HSP 1 Score: 284.648 bits (727), Expect = 6.125e-76 Identity = 139/242 (57.44%), Postives = 173/242 (71.49%), Query Frame = 3 Query: 12 RNAIGRRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHDCKPTGNAMVRSSPTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITIFKQ---SHDPPQ-*GYAAGSQ*FLHQGQANASNHCLQPFWXXXXXXXXXXXXXXYFLVVDNDYTPWEKDALGGRATPTLQQPGEK 725 +NAIG RDGR YVVTD +D+PV+PKPGTLRHAV+QD+PLWI+F+RDM IQLK+ELI+NSFKTIDGRGA+VHI+ G CITIQ+VTN+IIHG+H+HDCK GNAMVRSSP H+GWRT++DGD +SIFG SH+W+DH S S+C DGL+DA+MGSTAIT+ HD G++ + A NH + YF VV+NDYT WE A+GG A PT+ G + Sbjct: 88 KNAIGGRDGRIYVVTDSGNDNPVSPKPGTLRHAVVQDEPLWIIFQRDMTIQLKEELIMNSFKTIDGRGASVHISGGPCITIQYVTNIIIHGIHIHDCKQGGNAMVRSSPRHFGWRTISDGDGVSIFGGSHVWVDHCSFSNCEDGLIDAIMGSTAITLSNNHMTHHDKVMLLGHSDTYSRDKNMQVTIAFNH-----FGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNR 324
BLAST of EY675164 vs. ExPASy Swiss-Prot
Match: PEL22_ARATH (Probable pectate lyase 22 OS=Arabidopsis thaliana GN=At5g63180 PE=2 SV=1) HSP 1 Score: 280.411 bits (716), Expect = 1.155e-74 Identity = 139/242 (57.44%), Postives = 172/242 (71.07%), Query Frame = 3 Query: 12 RNAIGRRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHDCKPTGNAMVRSSPTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITI---FKQSHDPPQ-*GYAAGSQ*FLHQGQANASNHCLQPFWXXXXXXXXXXXXXXYFLVVDNDYTPWEKDALGGRATPTLQQPGEK 725 +NAIG RDG YVVTDP +DDPVNP+PGTLR+AVIQD+PLWI+FKRDM IQLK+ELI+NSFKT+DGRGA+VHI+ G CITIQ+VTN+IIHGLH+HDCK GN VR SP HYG+RTV+DGD +SIFG SH+W+DH SLS+C DGL+DA+ GSTAITI + H+ G++ + + A NH + YF VV+NDYT WE A+GG A PT+ G + Sbjct: 110 KNAIGGRDGEIYVVTDPGNDDPVNPRPGTLRYAVIQDEPLWIIFKRDMTIQLKEELIMNSFKTLDGRGASVHISGGPCITIQYVTNIIIHGLHIHDCKQGGNTYVRDSPEHYGYRTVSDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIRGSTAITISNNYLTHHNKVMLLGHSDTYEQDKNMQVTIAFNH-----FGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNR 346 HSP 2 Score: 82.4185 bits (202), Expect = 4.637e-15 Identity = 43/97 (44.33%), Postives = 61/97 (62.89%), Query Frame = 1 Query: 475 LPFSNNHMTHHNEVMLLGHSDSYTRDKQMQVTIAYNHFGKGIIQKMAR---GENLVIS---LWWTMTTLPGKRMPLVEGQP----PPSNSPGKKKTR 735 + SNN++THHN+VMLLGHSD+Y +DK MQVTIA+NHFG+G++Q+M R G V++ W M + G P + Q P +S K+ T+ Sbjct: 264 ITISNNYLTHHNKVMLLGHSDTYEQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPDDSSSKEVTK 360
BLAST of EY675164 vs. ExPASy Swiss-Prot
Match: PEL5_ARATH (Probable pectate lyase 5 OS=Arabidopsis thaliana GN=At1g67750 PE=2 SV=2) HSP 1 Score: 278.485 bits (711), Expect = 4.389e-74 Identity = 138/242 (57.02%), Postives = 172/242 (71.07%), Query Frame = 3 Query: 12 RNAIGRRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHDCKPTGNAMVRSSPTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITI---FKQSHDPPQ-*GYAAGSQ*FLHQGQANASNHCLQPFWXXXXXXXXXXXXXXYFLVVDNDYTPWEKDALGGRATPTLQQPGEK 725 ++AIG RDG+ YVVTD D D VNPKPGTLRHAVIQD+PLWI+F RDMVI+LK+ELI+NSFKTIDGRGA+VHIA G CIT+Q+VTN+IIHG+++HDCK GNA VR SP+HYGWRT +DGDA+SIFG SH+W+DH SLS+CADGL+DA+ GSTAITI + H+ G++ + A NH + YF VV+NDYT W+ A+GG A PT+ G + Sbjct: 88 KHAIGGRDGKIYVVTDSSDKDVVNPKPGTLRHAVIQDEPLWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIAGGACITVQYVTNIIIHGVNIHDCKRKGNAYVRDSPSHYGWRTASDGDAVSIFGGSHVWVDHCSLSNCADGLIDAIHGSTAITISNNYLSHHNKVMLLGHSDSYTRDKNMQVTIAFNH-----FGEGLVQRMPRCRHGYFHVVNNDYTHWQMYAIGGSAAPTINSQGNR 324
BLAST of EY675164 vs. ExPASy Swiss-Prot
Match: PEL9_ARATH (Probable pectate lyase 9 OS=Arabidopsis thaliana GN=At3g24230 PE=2 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 5.365e-72 Identity = 143/240 (59.58%), Postives = 164/240 (68.33%), Query Frame = 3 Query: 18 AIGRRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHDCKPTGNAMVRSSPTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITI----FKQSHDPPQ*GYAAGSQ*FLHQGQANASNHCLQPFWXXXXXXXXXXXXXXYFLVVDNDYTPWEKDALGGRATPTLQQPGEK 725 A G R+G +YVVTD DDD VNPKPGTLRHAVIQ +PLWI+FKRDMVI+LKQELI+NSFKTID RGANVHIANG CITIQ +TNVI+HGLH+HDCK TGN VRSSP+ G+R ADGDAI+IFGSSHIWIDHNSLS+C DGLVD V GSTAITI F + G+ A NH + YF VV+NDYT W+ A+GG A PT+ G + Sbjct: 134 AFGGRNGSYYVVTDHSDDDVVNPKPGTLRHAVIQVEPLWIIFKRDMVIKLKQELIMNSFKTIDARGANVHIANGACITIQNITNVIVHGLHIHDCKRTGNVTVRSSPSQAGFRGTADGDAINIFGSSHIWIDHNSLSNCTDGLVDVVNGSTAITISNNHFTHHDEVMLLGHNDSYTRDKMMQVTVAYNH-----FGEGLIQRMPRCRHGYFHVVNNDYTHWKMYAIGGSANPTINSQGNR 368 HSP 2 Score: 89.3521 bits (220), Expect = 3.793e-17 Identity = 47/97 (48.45%), Postives = 60/97 (61.86%), Query Frame = 1 Query: 475 LPFSNNHMTHHNEVMLLGHSDSYTRDKQMQVTIAYNHFGKGIIQKMAR---GENLVIS---LWWTMTTLPGKRMPLVEGQ----PPPSNSPGKKKTR 735 + SNNH THH+EVMLLGH+DSYTRDK MQVT+AYNHFG+G+IQ+M R G V++ W M + G P + Q P N K+ T+ Sbjct: 286 ITISNNHFTHHDEVMLLGHNDSYTRDKMMQVTVAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWKMYAIGGSANPTINSQGNRFAAPKNHSAKEVTK 382 The following BLAST results are available for this feature:
BLAST of EY675164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >EY675164 ID=EY675164; Name=EY675164; organism=Citrus sinensis; type=EST; length=1026bpback to top |