EY656638

Overview
NameEY656638
Unique NameEY656638
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length935
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY656638 vs. ExPASy Swiss-Prot
Match: FCSA_DICDI (Fatty acyl-CoA synthetase A OS=Dictyostelium discoideum GN=fcsA PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.409e-29
Identity = 79/236 (33.47%), Postives = 133/236 (56.36%), Query Frame = 2
Query:  203 RRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANV-SSSQKKEAEELGVSCFSWEEFLQLG---TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNXAIVAEVLSVDXMFVVTGKVCSEEEHTSHPSXGHIYDQIIELIAXHRGCHXDF 898
            R  ++DGK G Y W++Y++    A   GSA+   G+N GDR GI+  N PEW+++  A  + ++  V LY TLGANA+E+++NH+E+S+   +   +  ILS +P     +KTIVS+  +  ++  K  +   V  +   +F +LG       E+P  +  ++ T++YTSG+TG PKGV+LT+  +V+EV   +  F   G V  E+ H S+    H +++ +  +  + G    F
Sbjct:   74 RELLADGKRGDYKWISYKQACIRANNIGSALVQLGLNKGDRIGIFSINRPEWVLSDMAAMNHSLVPVALYATLGANAIEYVVNHSEISVLLCEGKNVEKILS-MPGTT--IKTIVSYDPLPQATLDKFKDNENVKLYLLSDFEKLGEQNPAQHEVPSPE--DLCTLLYTSGSTGNPKGVMLTHTNMVSEVAGAN--FSPAG-VIPEDVHMSYLPLAHSFERAVVSLMCYVGGQIGF 301          
BLAST of EY656638 vs. ExPASy Swiss-Prot
Match: FCSB_DICDI (Fatty acyl-CoA synthetase B OS=Dictyostelium discoideum GN=fcsB PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 4.154e-28
Identity = 77/255 (30.20%), Postives = 128/255 (50.20%), Query Frame = 2
Query:  167 SAKRIPNNQMLG-RRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGT----LDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNXAIVAEVLSVDXMFVVTGKVCSEEEHTSHPSXGHIYDQIIELIAXHRGCHXD-FAGDXS 913
            S K+    +  G R+K S+G +G + W++Y    +        +   G+ P  + GI+  N  EW+I   A   Q+   V  Y+TLG  ++ ++  HAE+ +AF     +   L  + +    LKTI+ F ++       A+ELGV+ ++++E ++ G          PP   T +STIMYTSGTTG PKGV++T+  + + V +V        KV   + H S+    H+ ++++ L A H G     F+GD S
Sbjct:   72 SCKKYGERKCFGERKKDSNGNLGKFEWISYNTYLERCEYIQQGLCELGLKPKSKVGIFSKNRLEWLIVHSASFIQSYCVVSFYETLGVESLSYVTEHAEIGLAFCSAETLQKTLD-IAKGVKVLKTIICFDSIDKEHYNIAKELGVTLYTYDEIMKKGKEANGKHKHTPPTPDT-LSTIMYTSGTTGPPKGVMITHKNLTSVVCAVSDFI----KVYDTDVHYSYLPYAHVLERVVILAAFHFGAAIGIFSGDIS 320          
BLAST of EY656638 vs. ExPASy Swiss-Prot
Match: ACSL1_CAVPO (Long-chain-fatty-acid--CoA ligase 1 OS=Cavia porcellus GN=ACSL1 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.517e-27
Identity = 76/243 (31.28%), Postives = 126/243 (51.85%), Query Frame = 2
Query:  185 NNQMLGRRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRG--VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSIL--SCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELP-PKKKTNISTIMYTSGTTGEPKGVVLTNXAIVAEVLSVDXMFVVTGKVCSEEEHTSHPSXGHIYDQIIELIAXHRGCHXDF 898
            N   LG RK       PY WL+Y++V D +   GSA+  +G   +P    GI+  N PEW+I  +AC + ++  VPLYDTLGA+A+ +I+N AE+S+ F  + +   IL  S   +    LK IV   +  S   ++ ++ GV   S +    LG  +   P P +  +++ I +TSGTTG PKG ++T+  +V++  +          + + + H S     H+Y+Q+++ +    G    F
Sbjct:  105 NGPCLGSRKPDQ----PYEWLSYKQVEDLSECIGSALLQKGFQASPDQFIGIFAQNRPEWVIIEQACFAYSMVVVPLYDTLGADAITYIVNKAELSVIFADKPEKARILLESVENKLTPGLKIIVVMDSYGSELVEQGKKCGVEVISLKAMEGLGRANRRKPKPPEPDDLAVICFTSGTTGNPKGAMITHKNVVSDCSAFVKATEKALVLNASDIHISFLPLAHMYEQLLQCVMLCHGAKIGF 343          
BLAST of EY656638 vs. ExPASy Swiss-Prot
Match: ACSL1_HUMAN (Long-chain-fatty-acid--CoA ligase 1 OS=Homo sapiens GN=ACSL1 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 9.577e-25
Identity = 73/243 (30.04%), Postives = 118/243 (48.56%), Query Frame = 2
Query:  185 NNQMLGRRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVN--PGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSIL--SCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELP-PKKKTNISTIMYTSGTTGEPKGVVLTNXAIVAEVLSVDXMFVVTGKVCSEEEHTSHPSXGHIYDQIIELIAXHRGCHXDF 898
            N   LG RK       PY WL+Y++V + +   GSA+  +G    P    GI+  N PEW+I  + C + ++  VPLYDTLG  A+ +I+N AE+S+ FV + +   +L      +    LK IV      S   +  +  GV   S +    LG  +   P P    +++ I +TSGTTG PKG ++T+  IV++  +       T   C ++   S     H++++++E +    G    F
Sbjct:  105 NGPCLGSRKPDQ----PYEWLSYKQVAELSECIGSALIQKGFKTAPDQFIGIFAQNRPEWVIIEQGCFAYSMVIVPLYDTLGNEAITYIVNKAELSLVFVDKPEKAKLLLEGVENKLIPGLKIIVVMDAYGSELVERGQRCGVEVTSMKAMEDLGRANRRKPKPPAPEDLAVICFTSGTTGNPKGAMVTHRNIVSDCSAFVKATENTVNPCPDDTLISFLPLAHMFERVVECVMLCHGAKIGF 343          
BLAST of EY656638 vs. ExPASy Swiss-Prot
Match: ACSL1_MOUSE (Long-chain-fatty-acid--CoA ligase 1 OS=Mus musculus GN=Acsl1 PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.251e-24
Identity = 73/250 (29.20%), Postives = 127/250 (50.80%), Query Frame = 2
Query:  185 NNQMLGRRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDR--CGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSIL-----SCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELP-PKKKTNISTIMYTSGTTGEPKGVVLTNXAIVAE----VLSVDXMFVVTGKVCSEEEHTSHPSXGHIYDQIIELIAXHRGCHXDF 898
            N   LG RK +     PY W++Y+EV + A   GS +  +G  P      G++  N PEW+I  + C S ++  VPLYDTLGA+A+ +I+N AE+S+ F  + +   +L     + L  C   LK IV   +  S   +  ++ GV   S +    LG ++   P P +  +++ I +TSGTTG PKG ++T+  I+ +    + + +  F+ +    +++   S     H+++ ++E +    G    F
Sbjct:  106 NGPCLGSRKPNQ----PYEWISYKEVAELAECIGSGLIQKGFKPCSEQFIGLFSQNRPEWVIVEQGCFSYSMVVVPLYDTLGADAITYIVNKAELSVIFADKPEKAKLLLEGVENKLTPC---LKIIVIMDSYGSDLVERGKKCGVEIISLKALEDLGRVNRVKPKPPEPEDLAIICFTSGTTGNPKGAMITHQNIINDCSGFIKATESAFIAS----TDDVLISFLPLAHMFETVVECVMLCHGAKIGF 344          
BLAST of EY656638 vs. ExPASy Swiss-Prot
Match: ACSL5_RAT (Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus GN=Acsl5 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.634e-24
Identity = 69/231 (29.87%), Postives = 118/231 (51.08%), Query Frame = 2
Query:  185 NNQMLGRRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDR--CGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSIL--SCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELP-PKKKTNISTIMYTSGTTGEPKGVVLTNXAIVAEVLSVDXMFVVTGKVCSEEEHTSHPSXGHIYDQIIE 862
            N   LG RK +     PY W++Y++V D A   GS +  +G  P      GI+  N PEW+I+  AC + ++  VPLYDTLGA A+ ++IN A++S+      +  ++L  +        LKT++          K  E+ G+   S  +   LG  + + P P    ++S I +TSGTTG+PKG +LT+  IV+ + +         +   E+   S+    H+++++++
Sbjct:   90 NGPCLGYRKPNQ----PYKWISYKQVSDRAEYLGSCLLHKGYKPSQDQFIGIFAQNRPEWVISELACYTYSMVAVPLYDTLGAEAIIYVINRADISVVICDTPQKATMLIENVEKDLTPGLKTVILMDPFDDDLMKRGEKCGIEMLSLHDAENLGKENFKKPMPPNPEDLSVICFTSGTTGDPKGAMLTHQNIVSNMAAFLKFLEPIFQPTPEDVTISYLPLAHMFERLVQ 316          
BLAST of EY656638 vs. ExPASy Swiss-Prot
Match: ACSL5_MOUSE (Long-chain-fatty-acid--CoA ligase 5 OS=Mus musculus GN=Acsl5 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.383e-23
Identity = 68/231 (29.44%), Postives = 117/231 (50.65%), Query Frame = 2
Query:  185 NNQMLGRRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDR--CGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSIL--SCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELP-PKKKTNISTIMYTSGTTGEPKGVVLTNXAIVAEVLSVDXMFVVTGKVCSEEEHTSHPSXGHIYDQIIE 862
            N   LG RK +     PY W++Y++V D A   GS +  +G         GI+  N PEW+I+  AC + ++  VPLYDTLG  A+ F+IN A++ +      +  ++L  +        LKTI+          K  E+ GV   S  +   +G  + + P P K  ++S I +TSGTTG+PKG +LT+  +V+ + +         +  S++   S+    H+++++++
Sbjct:   90 NGPCLGYRKPNQ----PYKWISYKQVSDRAEYLGSCLLHKGYKSSQDQFVGIFAQNRPEWVISELACYTYSMVAVPLYDTLGTEAIIFVINRADIPVVICDTPQKATMLVENVEKGLTPGLKTIILMDPFDDDLMKRGEKCGVEMLSLHDAENIGKENFKKPVPPKPEDLSVICFTSGTTGDPKGAMLTHENVVSNMAAFLKFLEPIFQPTSDDVTISYLPLAHMFERLVQ 316          
BLAST of EY656638 vs. ExPASy Swiss-Prot
Match: LCF2_SCHPO (Long-chain-fatty-acid--CoA ligase 2 OS=Schizosaccharomyces pombe GN=SPBP4H10.11c PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.406e-22
Identity = 79/332 (23.80%), Postives = 151/332 (45.48%), Query Frame = 2
Query:   26 YTVKVEEARPAADGKPSAGPVYRCIYAKDGLLESPV-GLESPWQFFCDSAKRIPNNQMLGRRKV-------------------------SDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEEL------GVSCFSWEEFLQLGTLDCELP-PKKKTNISTIMYTSGTTGEPKGVVLTNXAIVAEVLSVDXMFVVTGKVCSEEEHTSHPSXGHIYDQIIELIAXHRGCHXDFAGDXSYFD 922
            Y V+ ++++     +P    +YR I++   LL++P  G+ + +   C +AK     Q +G RK+                         +  ++GPY ++++ +VY+ A+  GS + + G+        + +   +W    + C+SQAI  V  Y+TLG + +   ++  +    F   N IP +L  L +      T V     SS+  ++  EL       V   +++  L LG    + P P K  +I   MYTSG+TG+PKGVVL +  I+A +  ++   +++  +  ++   ++    HI++ I E+   + G    +A   +  D
Sbjct:    7 YCVETKDSK-----QPGESYIYRSIHSAGKLLDTPEDGVSTVYDLLCTAAKNHGEKQAMGSRKLIKENREEREIIRKVDNEEVVEKKLWTTYELGPYEYISFNKVYEIALALGSGLVASGITSETTMLFFAATSAKWFTTAQGCSSQAIPIVTAYETLGEDGIYTSLDECKSRAIFTDPNLIPKLLGPLKQ-----STWVKLIVCSSTPSEDLVELVKSTAPDVEIITYDNLLSLGKEKPQPPHPPKADDICCYMYTSGSTGKPKGVVLLHRNIIAALGGINR--ILSQHINVKDYVLAYLPLAHIFEFIFEMCCLYWGGVLGYASPRTLTD 326          
BLAST of EY656638 vs. ExPASy Swiss-Prot
Match: ACSL6_HUMAN (Long-chain-fatty-acid--CoA ligase 6 OS=Homo sapiens GN=ACSL6 PE=2 SV=4)

HSP 1 Score: 105.916 bits (263), Expect = 3.406e-22
Identity = 80/250 (32.00%), Postives = 121/250 (48.40%), Query Frame = 2
Query:  185 NNQMLGRRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNP--GDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQE-NKIPSILSCLPRC-CLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELP-PKKKTNISTIMYTSGTTGEPKGVVLTNXAIVAEVLSVDXMFVVTGKVC---SEEEHTSHPSXGHIYDQIIE-LIAXHRGCHXDFAGD 907
            N   LG RK       PY WL+YQEV D A   GS +             G++  N PEWII   AC + ++  VPLYDTLG  A+ +IIN A++S   V +  K   +L  + R     LK I+       + K+  ++ GV   S +     G  + + P P +  ++S + +TSGTTG PKG +LT+  +VA+         VT KV     ++   S     H+++++I+ ++  H G    F GD
Sbjct:  105 NGPCLGFRKPKQ----PYQWLSYQEVADRAEFLGSGLLQHNCKACTDQFIGVFAQNRPEWIIVELACYTYSMVVVPLYDTLGPGAIRYIINTADISTVIVDKPQKAVLLLEHVERKETPGLKLIILMDPFEEALKERGQKCGVVIKSMQAVEDCGQENHQAPVPPQPDDLSIVCFTSGTTGNPKGAMLTHGNVVAD---FSGFLKVTEKVIFPRQDDVLISFLPLAHMFERVIQSVVYCHGGRVGFFQGD 347          
BLAST of EY656638 vs. ExPASy Swiss-Prot
Match: ACSL1_RAT (Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus GN=Acsl1 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.406e-22
Identity = 69/246 (28.05%), Postives = 123/246 (50.00%), Query Frame = 2
Query:  197 LGRRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDR--CGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSIL-----SCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELP-PKKKTNISTIMYTSGTTGEPKGVVLTNXAIVAE----VLSVDXMFVVTGKVCSEEEHTSHPSXGHIYDQIIELIAXHRGCHXDF 898
            LG RK +     PY W++Y++V + A   GSA+  +G  P      GI+  N PEW+   + C + ++  VPLYDTLG +A+ +I+N AE+S+ F  + +   +L     + L  C   LK IV   +  +   +  ++ GV     +    LG ++   P P +  +++ I +TSGTTG PKG ++T+  I+ +    + + +  F+ +     E+   S     H+++ ++E +    G    F
Sbjct:  110 LGSRKPNQ----PYEWISYKQVAEMAECIGSALIQKGFKPCSEQFIGIFSQNRPEWVTIEQGCFTYSMVVVPLYDTLGTDAITYIVNKAELSVIFADKPEKAKLLLEGVENKLTPC---LKIIVIMDSYDNDLVERGQKCGVEIIGLKALEDLGRVNRTKPKPPEPEDLAIICFTSGTTGNPKGAMVTHQNIMNDCSGFIKATESAFIAS----PEDVLISFLPLAHMFETVVECVMLCHGAKIGF 344          
The following BLAST results are available for this feature:
BLAST of EY656638 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
FCSA_DICDI6.409e-2933.47Fatty acyl-CoA synthetase A OS=Dictyostelium disco... [more]
FCSB_DICDI4.154e-2830.20Fatty acyl-CoA synthetase B OS=Dictyostelium disco... [more]
ACSL1_CAVPO3.517e-2731.28Long-chain-fatty-acid--CoA ligase 1 OS=Cavia porce... [more]
ACSL1_HUMAN9.577e-2530.04Long-chain-fatty-acid--CoA ligase 1 OS=Homo sapien... [more]
ACSL1_MOUSE1.251e-2429.20Long-chain-fatty-acid--CoA ligase 1 OS=Mus musculu... [more]
ACSL5_RAT1.634e-2429.87Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norv... [more]
ACSL5_MOUSE1.383e-2329.44Long-chain-fatty-acid--CoA ligase 5 OS=Mus musculu... [more]
LCF2_SCHPO3.406e-2223.80Long-chain-fatty-acid--CoA ligase 2 OS=Schizosacch... [more]
ACSL6_HUMAN3.406e-2232.00Long-chain-fatty-acid--CoA ligase 6 OS=Homo sapien... [more]
ACSL1_RAT3.406e-2228.05Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norv... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-123-A07-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY656638 ID=EY656638; Name=EY656638; organism=Citrus sinensis; type=EST; length=935bp
TTCTCGACCCACGCGTCCGGAGACCTATACTGTCAAAGTTGAAGAAGCAA
GGCCTGCTGCCGATGGCAAGCCGTCGGCCGGCCCGGTTTATCGGTGCATT
TATGCGAAAGATGGGTTACTAGAGTCACCGGTCGGTTTGGAGTCTCCATG
GCAGTTTTTTTGTGATTCTGCCAAAAGGATTCCAAATAACCAAATGCTGG
GTCGACGCAAAGTCAGTGACGGAAAGGTTGGTCCTTATGTGTGGCTCACA
TACCAAGAGGTCTATGATGCTGCGATTCGTTTCGGTTCCGCCATGAGGAG
CCGTGGTGTCAATCCTGGAGATCGTTGCGGTATTTATGGATCTAATTGCC
CTGAATGGATTATAGCTATGGAGGCTTGTAATAGCCAGGCCATAACGTAT
GTACCACTATATGACACCCTAGGTGCTAATGCGGTGGAGTTCATCATCAA
TCATGCTGAAGTTTCAATAGCTTTTGTTCAGGAGAACAAAATCCCTTCTA
TTCTATCTTGCCTTCCAAGGTGTTGTTTGTACTTAAAAACTATTGTCAGC
TTTGCAAATGTTTCTAGCTCACAGAAGAAGGAAGCTGAAGAACTTGGGGT
CTCTTGCTTTTCTTGGGAGGAATTTCTACAGTTGGGAACTCTGGATTGTG
AACTTCCACCGAAAAAGAAGACCAACATTTCCACAATAATGTATACAAGT
GGAACAACAGGAGAACCTAAAGGTGTCGTTCTCACTAATCANGCTATTGT
AGCAGAAGTACTGAGTGTCGACCNAATGTTTGTGGTTACGGGCAAAGTGT
GTTCAGAAGAGGAACATACTTCTCATCCTTCCTTNGGCCATATATATGAT
CAGATCATTGAACTCATTGCATNCCACAGGGGGTGTCATANGGATTTTGC
AGGCGATGNNTCGTATTTTGATGAGACATCAGGAC
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