EY674895
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY674895 vs. ExPASy Swiss-Prot
Match: GIGAN_ORYSJ (Protein GIGANTEA OS=Oryza sativa subsp. japonica GN=GI PE=2 SV=2) HSP 1 Score: 182.956 bits (463), Expect = 1.618e-50 Identity = 99/161 (61.49%), Postives = 115/161 (71.43%), Query Frame = 1 Query: 34 LASRLLFIVLTVCVSHEAQSNGSKKPRGEENYFPDESTEDLQ-KDLRTRKVKRQGPVAAFDSYXXXXXXXXXXELQLVPLVSRSGNHSKSKDAQILAKPAKINGNSNECKSSIESAIHHTHRILTILEALFSLKPSSIGTSWGYSSNEIMAAAMVAAHVSE 513 LASRLLF+VLTVCVSH+A GSK+P G +N+ +E T D + + R R KRQGPVA FDSY ELQL P +S++GNHS KD+ + P K G SNE +SI SAI HT RIL ILEALFSLKPSS+GTSW YSSNEI+AAAMVAAHVSE Sbjct: 580 LASRLLFVVLTVCVSHQALPGGSKRPTGSDNHSSEEVTNDSRLTNGRNRCKKRQGPVATFDSYVLAAVCALSCELQLFPFISKNGNHSNLKDSIKIVIPGKTTGISNELHNSISSAILHTRRILGILEALFSLKPSSVGTSWSYSSNEIVAAAMVAAHVSE 740 HSP 2 Score: 35.8094 bits (81), Expect = 1.618e-50 Identity = 14/24 (58.33%), Postives = 19/24 (79.17%), Query Frame = 2 Query: 515 LFRRSRACMHALSVWMRCRWEYEI 586 LFRRSR C++ALS +C+W+ EI Sbjct: 741 LFRRSRPCLNALSALKQCKWDAEI 764 HSP 3 Score: 23.8682 bits (50), Expect = 1.618e-50 Identity = 11/28 (39.29%), Postives = 16/28 (57.14%), Query Frame = 3 Query: 633 GKRLAPIGKKGEPIESHL*GRPLFGGDP 716 GK + I K EP+E+HL P+ +P Sbjct: 779 GKTVTSIVNKAEPLEAHLTLTPVKKDEP 806
BLAST of EY674895 vs. ExPASy Swiss-Prot
Match: GIGAN_ARATH (Protein GIGANTEA OS=Arabidopsis thaliana GN=GI PE=1 SV=2) HSP 1 Score: 178.333 bits (451), Expect = 3.875e-49 Identity = 98/166 (59.04%), Postives = 118/166 (71.08%), Query Frame = 1 Query: 34 LASRLLFIVLTVCVSHEAQSNGSKKPRGE-----ENYFPDESTEDLQK-DLRTRKVKRQGPVAAFDSYXXXXXXXXXXELQLVPLVSRSGNHSKSKDAQILAKPAKINGNSNECKSSIESAIHHTHRILTILEALFSLKPSSIGTSWGYSSNEIMAAAMVAAHVSE 513 LASRLLF+VLTVCVSHEAQS+GSK+PR E EN ++ + Q + ++R VK QGPVAAFDSY E+QL P++S GN S S A + KP KING+S E + I+SAI HT RIL ILEALFSLKPSS+GT W YSS+EI+AAAMVAAH+SE Sbjct: 584 LASRLLFVVLTVCVSHEAQSSGSKRPRSEYASTTENIEANQPVSNNQTANRKSRNVKGQGPVAAFDSYVLAAVCALACEVQLYPMISGGGNFSNSAVAGTITKPVKINGSSKEYGAGIDSAISHTRRILAILEALFSLKPSSVGTPWSYSSSEIVAAAMVAAHISE 749 HSP 2 Score: 38.891 bits (89), Expect = 3.875e-49 Identity = 22/45 (48.89%), Postives = 27/45 (60.00%), Query Frame = 2 Query: 515 LFRRSRACMHALSVWMRCRWEYEILK*GQHLCINPLKIPRKAVGS 649 LFRRS+A HALS MRC+W+ EI K L N + + K V S Sbjct: 750 LFRRSKALTHALSGLMRCKWDKEIHKRASSL-YNLIDVHSKVVAS 793 The following BLAST results are available for this feature:
BLAST of EY674895 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY674895 ID=EY674895; Name=EY674895; organism=Citrus sinensis; type=EST; length=998bpback to top |