EY649741
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY649741 vs. ExPASy Swiss-Prot
Match: FDFT_NICBE (Squalene synthetase OS=Nicotiana benthamiana PE=2 SV=1) HSP 1 Score: 355.525 bits (911), Expect = 1.191e-108 Identity = 174/206 (84.47%), Postives = 188/206 (91.26%), Query Frame = 1 Query: 22 MGSLAAVLRHPYDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLINAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLCLSKLFYASGTEDLAPDSLSNSMGLFSQ 639 MGSL A+L++P DLYPL+KLK+A+R AEKQIPP P+W FCYSMLHKVSRSFALVIQQL +L +AVCIFYLVLRALDTVEDDTSIPTDVKVPILI+FH+HVYDREWHFSCGTKEYKVLMDQFHHVSTAFLEL K YQ AIEDIT RMGAGMAKFICKEVE+ DDYDEYC+YVAGLVGL LSKLF+AS EDLA DSLSNSMGLF Q Sbjct: 1 MGSLRAILKNPEDLYPLVKLKLAARHAEKQIPPSPNWGFCYSMLHKVSRSFALVIQQLPVELRDAVCIFYLVLRALDTVEDDTSIPTDVKVPILISFHQHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELRKHYQQAIEDITMRMGAGMAKFICKEVETTDDYDEYCHYVAGLVGLGLSKLFHASEKEDLASDSLSNSMGLFLQ 206 HSP 2 Score: 60.077 bits (144), Expect = 1.191e-108 Identity = 24/32 (75.00%), Postives = 26/32 (81.25%), Query Frame = 3 Query: 624 GFIFSNTYIIRDYLEDINEIPECRMFWPREIW 719 G T IIRDYLEDINE+P+CRMFWPREIW Sbjct: 202 GLFLQKTNIIRDYLEDINEVPKCRMFWPREIW 233
BLAST of EY649741 vs. ExPASy Swiss-Prot
Match: FDFT_ARATH (Squalene synthetase OS=Arabidopsis thaliana GN=SQS1 PE=2 SV=1) HSP 1 Score: 347.436 bits (890), Expect = 3.479e-105 Identity = 165/208 (79.33%), Postives = 188/208 (90.38%), Query Frame = 1 Query: 22 MGSLAAVLRHPYDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLINAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLCLSKLFYASGTEDLAPD--SLSNSMGLFSQ 639 MGSL +LR+P D+YPLLK+K A +AEKQIPPEPHW FCYSMLHKVSRSF+LVIQQL T+L NAVC+FYLVLRALDTVEDDTSIPTD KVPILIAFHRH+YD +WH+SCGTKEYK+LMDQFHHVS AFLEL KGYQ+AIE+IT+RMGAGMAKFIC+EVE++DDYDEYC+YVAGLVGL LSKLF A+G+E L PD ++SNSMGLF Q Sbjct: 1 MGSLGTMLRYPDDIYPLLKMKRAIEKAEKQIPPEPHWGFCYSMLHKVSRSFSLVIQQLNTELRNAVCVFYLVLRALDTVEDDTSIPTDEKVPILIAFHRHIYDTDWHYSCGTKEYKILMDQFHHVSAAFLELEKGYQEAIEEITRRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFLAAGSEVLTPDWEAISNSMGLFLQ 208 HSP 2 Score: 56.6102 bits (135), Expect = 3.479e-105 Identity = 24/32 (75.00%), Postives = 25/32 (78.12%), Query Frame = 3 Query: 624 GFIFSNTYIIRDYLEDINEIPECRMFWPREIW 719 G T IIRDYLEDINEIP+ RMFWPREIW Sbjct: 204 GLFLQKTNIIRDYLEDINEIPKSRMFWPREIW 235
BLAST of EY649741 vs. ExPASy Swiss-Prot
Match: FDFT_MOUSE (Squalene synthetase OS=Mus musculus GN=Fdft1 PE=2 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 6.099e-47 Identity = 95/206 (46.12%), Postives = 130/206 (63.11%), Query Frame = 1 Query: 43 LRHPYDLYPLLKLKMASRQ----AEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLINAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLCLSKLFYASGTED--LAPD-SLSNSMGLFSQ 639 L HP + Y LL+ +M R+ Q CY L++ SRSFA VIQ L D+ +A+C+FYLVLRALDTVEDD SI + K+P+L FH +YD EW F+ ++ + +++ F +S F L + YQ I+DI +MG GMA+F+ K+V S D+D+YC+YVAGLVG+ LS+LF AS ED + D +NSMGLF Q Sbjct: 7 LGHPEEFYNLLRFRMGGRRNFIPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGDIRHAICVFYLVLRALDTVEDDMSISVEKKIPLLCNFHTFLYDPEWRFTESKEKDRQVLEDFPTISLEFRNLAEKYQTVIDDICHQMGCGMAEFVDKDVTSKQDWDKYCHYVAGLVGIGLSRLFSASEFEDPIVGEDIECANSMGLFLQ 212 HSP 2 Score: 36.5798 bits (83), Expect = 6.099e-47 Identity = 17/32 (53.12%), Postives = 19/32 (59.38%), Query Frame = 3 Query: 624 GFIFSNTYIIRDYLEDINEIPECRMFWPREIW 719 G T IIRDYLED E R FWP+E+W Sbjct: 208 GLFLQKTNIIRDYLEDQQ---EGRKFWPQEVW 236
BLAST of EY649741 vs. ExPASy Swiss-Prot
Match: FDFT_RAT (Squalene synthetase OS=Rattus norvegicus GN=Fdft1 PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 7.949e-47 Identity = 95/208 (45.67%), Postives = 133/208 (63.94%), Query Frame = 1 Query: 43 LRHPYDLYPLLKLKMASRQAEKQIPPEPHWAF------CYSMLHKVSRSFALVIQQLGTDLINAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLCLSKLFYASGTED--LAPDS-LSNSMGLFSQ 639 L HP + Y LL+ +M R+ IP + CY L + SRSFA VIQ L D+ +AVC+FYL+LRA+DTVEDD +I + K+P+L FH +Y+ EW F+ ++++V+++ F +S F L + YQ I DI RMG GMA+F+ K+V S D+D+YC+YVAGLVG+ LS+LF AS ED + D+ +NSMGLF Q Sbjct: 7 LGHPEEFYNLLRFRMGGRR--NFIPKMDRNSLSNSLKTCYKYLDQTSRSFAAVIQALDGDIRHAVCVFYLILRAMDTVEDDMAISVEKKIPLLRNFHTFLYEPEWRFTESKEKHRVVLEDFPTISLEFRNLAEKYQTVIADICHRMGCGMAEFLNKDVTSKQDWDKYCHYVAGLVGIGLSRLFSASEFEDPIVGEDTECANSMGLFLQ 212 HSP 2 Score: 36.965 bits (84), Expect = 7.949e-47 Identity = 17/32 (53.12%), Postives = 19/32 (59.38%), Query Frame = 3 Query: 624 GFIFSNTYIIRDYLEDINEIPECRMFWPREIW 719 G T IIRDYLED E R FWP+E+W Sbjct: 208 GLFLQKTNIIRDYLEDQQ---EGRQFWPQEVW 236
BLAST of EY649741 vs. ExPASy Swiss-Prot
Match: FDFT_DICDI (Squalene synthetase OS=Dictyostelium discoideum GN=fdfT PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 7.775e-44 Identity = 91/206 (44.17%), Postives = 124/206 (60.19%), Query Frame = 1 Query: 43 LRHPYDLYPLLKLKMASRQAEKQIPPEP--HWAFCYSMLHKVSRSFALVIQQLGTDLINAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWH-FSCG-TKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLCLSKLFYASGTED---LAPDSLSNSMGLFSQ 639 L HP + LLK+ K E + +CY +L+K SRSFA VI +L L +A+CIFYLVLR LDT+EDDT++ + K+P+L +F +Y + F G + K L++ F V FL LG GY I DIT+RM GM++F+ K V ++ ++D YC+YVAGLVG+ LSK+F+ASG E D SN MGLF Q Sbjct: 7 LAHPDEFLSLLKIGYTESFKPKSQLKENLGNKEWCYELLNKTSRSFAFVINELEPSLKDAICIFYLVLRGLDTIEDDTTVELNTKLPVLTSFSEGLYQPGYKVFGYGMNNDEKNLVENFDKVVDVFLGLGDGYCTIIHDITRRMANGMSEFLQKSVVTLPEWDLYCHYVAGLVGIGLSKIFHASGLESEWFATADDESNQMGLFLQ 212 HSP 2 Score: 42.743 bits (99), Expect = 7.775e-44 Identity = 19/32 (59.38%), Postives = 22/32 (68.75%), Query Frame = 3 Query: 624 GFIFSNTYIIRDYLEDINEIPECRMFWPREIW 719 G T IIRDYLEDIN E R+FWPR++W Sbjct: 208 GLFLQKTNIIRDYLEDIN---EKRIFWPRDVW 236
BLAST of EY649741 vs. ExPASy Swiss-Prot
Match: FDFT_BOVIN (Squalene synthetase OS=Bos taurus GN=FDFT1 PE=2 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 1.013e-43 Identity = 93/208 (44.71%), Postives = 134/208 (64.42%), Query Frame = 1 Query: 43 LRHPYDLYPLLKLKMASRQAEKQIPPEPHWAF------CYSMLHKVSRSFALVIQQLGTDLINAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLCLSKLFYASGTED--LAPDS-LSNSMGLFSQ 639 L HP + Y LL+ +M R+ K IP + CY L++ SRSFA VIQ L ++ +AVCIFYLVLRALDT+EDD +I + KVP+L FH ++Y+ +W F+ ++ + +++ F +S F L + YQ I D+ ++MG GMA+F+ K V S ++D+YC+YVAGLVG+ LS+LF AS ED + D+ +NSMGLF Q Sbjct: 7 LGHPEEFYNLLRFQMGGRR--KVIPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGEMRHAVCIFYLVLRALDTLEDDMTISIERKVPLLHNFHSYLYEPDWRFTESKEKDRQVLEDFPTISLEFRNLAEKYQTVIVDVCQKMGFGMAEFLDKRVTSEREWDKYCHYVAGLVGIGLSRLFPASELEDPLIGEDTERANSMGLFLQ 212 HSP 2 Score: 34.6538 bits (78), Expect = 1.013e-43 Identity = 17/32 (53.12%), Postives = 18/32 (56.25%), Query Frame = 3 Query: 624 GFIFSNTYIIRDYLEDINEIPECRMFWPREIW 719 G T IIRDYLED E R FWP+E W Sbjct: 208 GLFLQKTNIIRDYLEDQR---EGREFWPQETW 236
BLAST of EY649741 vs. ExPASy Swiss-Prot
Match: FDFT_PONAB (Squalene synthetase OS=Pongo abelii GN=FDFT1 PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 6.465e-43 Identity = 92/208 (44.23%), Postives = 131/208 (62.98%), Query Frame = 1 Query: 43 LRHPYDLYPLLKLKMASRQAEKQIPPEPHWAF------CYSMLHKVSRSFALVIQQLGTDLINAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLCLSKLFYASGTED--LAPDS-LSNSMGLFSQ 639 L HP + Y L++ ++ ++ K +P + CY L++ SRSFA VIQ L ++ NAVCIFYLVLRALDT+EDD +I + KVP+L FH +Y +W F ++ + +++ F +S F L + YQ I DI +RMG GMA+F+ K V S ++D+YC+YVAGLVG+ LS+LF AS ED + D+ +NSMGLF Q Sbjct: 7 LGHPEEFYNLVRFRIGGKR--KVMPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGEMRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYQPDWRFMESKEKDRQVLEDFPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMGLFLQ 212 HSP 2 Score: 33.4982 bits (75), Expect = 6.465e-43 Identity = 16/32 (50.00%), Postives = 18/32 (56.25%), Query Frame = 3 Query: 624 GFIFSNTYIIRDYLEDINEIPECRMFWPREIW 719 G T IIRDYLED R FWP+E+W Sbjct: 208 GLFLQKTNIIRDYLEDQQ---GGREFWPQEVW 236
BLAST of EY649741 vs. ExPASy Swiss-Prot
Match: FDFT_HUMAN (Squalene synthetase OS=Homo sapiens GN=FDFT1 PE=1 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 6.465e-43 Identity = 92/208 (44.23%), Postives = 131/208 (62.98%), Query Frame = 1 Query: 43 LRHPYDLYPLLKLKMASRQAEKQIPPEPHWAF------CYSMLHKVSRSFALVIQQLGTDLINAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLCLSKLFYASGTED--LAPDS-LSNSMGLFSQ 639 L HP + Y L++ ++ ++ K +P + CY L++ SRSFA VIQ L ++ NAVCIFYLVLRALDT+EDD +I + KVP+L FH +Y +W F ++ + +++ F +S F L + YQ I DI +RMG GMA+F+ K V S ++D+YC+YVAGLVG+ LS+LF AS ED + D+ +NSMGLF Q Sbjct: 7 LGHPEEFYNLVRFRIGGKR--KVMPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGEMRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYQPDWRFMESKEKDRQVLEDFPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMGLFLQ 212 HSP 2 Score: 33.4982 bits (75), Expect = 6.465e-43 Identity = 16/32 (50.00%), Postives = 18/32 (56.25%), Query Frame = 3 Query: 624 GFIFSNTYIIRDYLEDINEIPECRMFWPREIW 719 G T IIRDYLED R FWP+E+W Sbjct: 208 GLFLQKTNIIRDYLEDQQ---GGREFWPQEVW 236
BLAST of EY649741 vs. ExPASy Swiss-Prot
Match: FDFT_SCHPO (Squalene synthetase OS=Schizosaccharomyces pombe GN=erg9 PE=1 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.980e-36 Identity = 82/181 (45.30%), Postives = 115/181 (63.54%), Query Frame = 1 Query: 139 CYSMLHKVSRSFALVIQQLGTDLINAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF--SCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICK-------EVESIDDYDEYCYYVAGLVGLCLSKLFYASGTEDLAPD-----SLSNSMGLFSQ 639 CY +L SRSFA+VI++L + AV IFYLVLR LDTVEDD ++P D K+PIL F++ + W F S ++ + L+ +F V +L L +GY++ I +ITK MG GMA + VE+I+D+++YC+YVAGLVG+ LS+LF S ED PD ++SNS+GLF Q Sbjct: 38 CYQLLDMTSRSFAVVIKELPNGIREAVMIFYLVLRGLDTVEDDMTLPLDKKLPILRDFYKTIEVEGWTFNESGPNEKDRQLLVEFDVVIKEYLNLSEGYRNVISNITKEMGDGMAYYASLAEKNDGFSVETIEDFNKYCHYVAGLVGIGLSRLFAQSKLED--PDLAHSQAISNSLGLFLQ 216 HSP 2 Score: 34.2686 bits (77), Expect = 2.980e-36 Identity = 16/32 (50.00%), Postives = 18/32 (56.25%), Query Frame = 3 Query: 624 GFIFSNTYIIRDYLEDINEIPECRMFWPREIW 719 G IIRDY ED ++ R FWPREIW Sbjct: 212 GLFLQKVNIIRDYREDFDDN---RHFWPREIW 240
BLAST of EY649741 vs. ExPASy Swiss-Prot
Match: FDFT_ASHGO (Squalene synthetase OS=Ashbya gossypii GN=ERG9 PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.897e-35 Identity = 90/221 (40.72%), Postives = 120/221 (54.30%), Query Frame = 1 Query: 22 MGSLAAVLRHPYDLYPLLKLKMASRQA--EKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLINAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHF--SCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKE------VESIDDYDEYCYYVAGLVGLCLSKL-----FYASGTEDLAPDSLSNSMGLFSQ 639 MG + + HP +L LKLK CY +L + SRSFA VI +L +L NAV +FYL+LRALDTVEDD +I VKVP+L F + + W F + T++ + ++ +F + F +L YQ I DIT +MG GMA +I E +E+I DYD YC+YVAGLVG L+ L F + G +PD L SMGLF Q Sbjct: 1 MGKVVQLFTHPLELKAALKLKFLREPLYPADDTQGSAELKRCYQLLQRTSRSFAAVIMELHPELRNAVMLFYLILRALDTVEDDMTISPKVKVPLLREFDQKLKLDTWSFDGNAKTEKDRDVLVEFSTILAEFHKLKPEYQQVIADITHKMGNGMADYILDEKFNLSGLETIQDYDRYCHYVAGLVGDGLTHLIMLAKFSSPGLYYDSPD-LYESMGLFLQ 220 HSP 2 Score: 35.8094 bits (81), Expect = 1.897e-35 Identity = 16/32 (50.00%), Postives = 19/32 (59.38%), Query Frame = 3 Query: 624 GFIFSNTYIIRDYLEDINEIPECRMFWPREIW 719 G T IIRDY ED+ + R FWP+EIW Sbjct: 216 GLFLQKTNIIRDYAEDL---ADGRSFWPKEIW 244 The following BLAST results are available for this feature:
BLAST of EY649741 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY649741 ID=EY649741; Name=EY649741; organism=Citrus sinensis; type=EST; length=912bpback to top |