EY702707
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY702707 vs. ExPASy Swiss-Prot
Match: PAB2_SCHPO (Polyadenylate-binding protein 2 OS=Schizosaccharomyces pombe GN=pab2 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 4.039e-34 Identity = 77/141 (54.61%), Postives = 99/141 (70.21%), Query Frame = 1 Query: 181 KDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-CGQPKGFAYGEFVEIDAVQNALRVNETELHGRQLKVSAKRTNIPGMKQFRGR 600 K+L +MK+R+ E+E EA LR MQ +++ E T A + +KE +D++S+YVGNVDY+ TPEE+Q HF SCG+VNRVTIL DK G PKGFAY EF E V NAL +N + LH R LKV+ KRTN+PGM + RGR Sbjct: 12 KELLEMKERVAEMEAEAAKLRAMQEQLDNE---------TEALRNDKESIDAQSVYVGNVDYSVTPEELQSHFASCGSVNRVTILCDKFTGHPKGFAYIEFSEPSLVPNALLLNGSMLHERPLKVTPKRTNVPGMSRGRGR 143
BLAST of EY702707 vs. ExPASy Swiss-Prot
Match: PABP2_DROPS (Polyadenylate-binding protein 2 OS=Drosophila pseudoobscura pseudoobscura GN=Pabp2 PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.299e-32 Identity = 73/153 (47.71%), Postives = 103/153 (67.32%), Query Frame = 1 Query: 184 DLEDMKKRLKEIEEEAGALREMQAKVEKEM--GAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKC-GQPKGFAYGEFVEIDAVQNALRVNETELHGRQLKVSAKRTNIPGMKQFRGRQPNPFGFRGQR 633 +LE +K R+KE+EEEA +++MQ++V+K+M G+ ++ + EK+E+D+RS+YVGNVDY + EE++ HF CGT+NRVTIL +K G PKGFAY EF + V+ AL +NET GRQ+KV +KRTN PG+ F RG R Sbjct: 43 ELEAIKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLAAVPLSLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRGRQIKVMSKRTNRPGLSTTNRFARGSFRGRGAR 195
BLAST of EY702707 vs. ExPASy Swiss-Prot
Match: PABP2_DROME (Polyadenylate-binding protein 2 OS=Drosophila melanogaster GN=Pabp2 PE=1 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.299e-32 Identity = 73/153 (47.71%), Postives = 103/153 (67.32%), Query Frame = 1 Query: 184 DLEDMKKRLKEIEEEAGALREMQAKVEKEM--GAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKC-GQPKGFAYGEFVEIDAVQNALRVNETELHGRQLKVSAKRTNIPGMKQFRGRQPNPFGFRGQR 633 +LE +K R+KE+EEEA +++MQ++V+K+M G+ ++ + EK+E+D+RS+YVGNVDY + EE++ HF CGT+NRVTIL +K G PKGFAY EF + V+ AL +NET GRQ+KV +KRTN PG+ F RG R Sbjct: 43 ELEAIKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLATVPLSLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRGRQIKVMSKRTNRPGLSTTNRFARGSFRGRGAR 195
BLAST of EY702707 vs. ExPASy Swiss-Prot
Match: PAB2A_XENLA (Polyadenylate-binding protein 2-A OS=Xenopus laevis GN=pabpn1-A PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.345e-29 Identity = 69/137 (50.36%), Postives = 94/137 (68.61%), Query Frame = 1 Query: 184 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSA---TQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-CGQPKGFAYGEFVEIDAVQNALRVNETELHGRQLKVSAKRTNIPGM 582 +LE +K R++E+EEEA L+E+Q +VEK+M + + EK E D+RSIYVGNVDY T EE++ HF CG+VNRVTIL DK G PKGFAY EF + ++V+ +L ++E+ GRQ+KV KRTN PG+ Sbjct: 109 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSVEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFCDKESVRTSLALDESLFRGRQIKVVPKRTNRPGI 245
BLAST of EY702707 vs. ExPASy Swiss-Prot
Match: PABP2_MOUSE (Polyadenylate-binding protein 2 OS=Mus musculus GN=Pabpn1 PE=2 SV=3) HSP 1 Score: 130.183 bits (326), Expect = 1.756e-29 Identity = 69/137 (50.36%), Postives = 94/137 (68.61%), Query Frame = 1 Query: 184 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSA---TQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-CGQPKGFAYGEFVEIDAVQNALRVNETELHGRQLKVSAKRTNIPGM 582 +LE +K R++E+EEEA L+E+Q +VEK+M + + EK E D+RSIYVGNVDY T EE++ HF CG+VNRVTIL DK G PKGFAY EF + ++V+ +L ++E+ GRQ+KV KRTN PG+ Sbjct: 114 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVIPKRTNRPGI 250
BLAST of EY702707 vs. ExPASy Swiss-Prot
Match: PAB2B_XENLA (Polyadenylate-binding protein 2-B OS=Xenopus laevis GN=pabpn1-B PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.756e-29 Identity = 69/137 (50.36%), Postives = 94/137 (68.61%), Query Frame = 1 Query: 184 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSA---TQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-CGQPKGFAYGEFVEIDAVQNALRVNETELHGRQLKVSAKRTNIPGM 582 +LE +K R++E+EEEA L+E+Q +VEK+M + + EK E D+RSIYVGNVDY T EE++ HF CG+VNRVTIL DK G PKGFAY EF + ++V+ +L ++E+ GRQ+KV KRTN PG+ Sbjct: 108 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSVEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVVPKRTNRPGI 244
BLAST of EY702707 vs. ExPASy Swiss-Prot
Match: PABP2_XENTR (Polyadenylate-binding protein 2 OS=Xenopus tropicalis GN=pabpn1 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 2.294e-29 Identity = 69/137 (50.36%), Postives = 94/137 (68.61%), Query Frame = 1 Query: 184 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSA---TQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-CGQPKGFAYGEFVEIDAVQNALRVNETELHGRQLKVSAKRTNIPGM 582 +LE +K R++E+EEEA L+E+Q +VEK+M + + EK E D+RSIYVGNVDY T EE++ HF CG+VNRVTIL DK G PKGFAY EF + ++V+ +L ++E+ GRQ+KV KRTN PG+ Sbjct: 109 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVVPKRTNRPGI 245
BLAST of EY702707 vs. ExPASy Swiss-Prot
Match: PABP2_HUMAN (Polyadenylate-binding protein 2 OS=Homo sapiens GN=PABPN1 PE=1 SV=3) HSP 1 Score: 129.798 bits (325), Expect = 2.294e-29 Identity = 69/137 (50.36%), Postives = 94/137 (68.61%), Query Frame = 1 Query: 184 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSA---TQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-CGQPKGFAYGEFVEIDAVQNALRVNETELHGRQLKVSAKRTNIPGM 582 +LE +K R++E+EEEA L+E+Q +VEK+M + + EK E D+RSIYVGNVDY T EE++ HF CG+VNRVTIL DK G PKGFAY EF + ++V+ +L ++E+ GRQ+KV KRTN PG+ Sbjct: 118 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVIPKRTNRPGI 254
BLAST of EY702707 vs. ExPASy Swiss-Prot
Match: PABP2_BOVIN (Polyadenylate-binding protein 2 OS=Bos taurus GN=PABPN1 PE=1 SV=3) HSP 1 Score: 129.798 bits (325), Expect = 2.294e-29 Identity = 69/137 (50.36%), Postives = 94/137 (68.61%), Query Frame = 1 Query: 184 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSA---TQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-CGQPKGFAYGEFVEIDAVQNALRVNETELHGRQLKVSAKRTNIPGM 582 +LE +K R++E+EEEA L+E+Q +VEK+M + + EK E D+RSIYVGNVDY T EE++ HF CG+VNRVTIL DK G PKGFAY EF + ++V+ +L ++E+ GRQ+KV KRTN PG+ Sbjct: 118 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVIPKRTNRPGI 254
BLAST of EY702707 vs. ExPASy Swiss-Prot
Match: PABP2_DICDI (Polyadenylate-binding protein 2 OS=Dictyostelium discoideum GN=pabpn1 PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 5.110e-29 Identity = 69/158 (43.67%), Postives = 98/158 (62.03%), Query Frame = 1 Query: 184 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQD-------SSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-CGQPKGFAYGEFVEIDAVQNALRVNETELHGRQLKVSAKRTNIPGMKQFRGRQPNPFGFRGQR 633 +LE+MKKR +E+EEEA L E+Q +E + ++EE+DSRS+YVGNVDY T +++ +FQSCGTVNR+TIL+DK G PKG Y EFV +++ NA+ +N++ + RQLK++ KRTN+P + P GFRG R Sbjct: 43 ELEEMKKRFREMEEEAKKLTELQNNLESNITGNNGVGIGGNIGGGGGLMNTDQEEIDSRSVYVGNVDYKSTHDQILAYFQSCGTVNRITILSDKTTGHPKGCCYVEFVNKESIINAMALNDSFFNERQLKITPKRTNLPYYMRQGVLPPGRGGFRGGR 200 The following BLAST results are available for this feature:
BLAST of EY702707 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >EY702707 ID=EY702707; Name=EY702707; organism=Citrus sinensis; type=EST; length=958bpback to top |