EY702599
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY702599 vs. ExPASy Swiss-Prot
Match: RL6_MESCR (60S ribosomal protein L6 OS=Mesembryanthemum crystallinum GN=RPL6 PE=2 SV=1) HSP 1 Score: 302.753 bits (774), Expect = 1.750e-81 Identity = 152/227 (66.96%), Postives = 171/227 (75.33%), Query Frame = 3 Query: 48 APKQGKPRVSRNPELIRGIGKFSRARMDHKRGLWAIKAKNGGVFPRHDXXXXXXXXXXXXXXFYPADDVKKPLVNKRKPKPTKLRASITPGTVLIILAGRVKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIGTSTKVDISGVNVDKFDDKYFATEVERKKNKGQNXXXXXXXXXXXXXXXXXXDDQKSCDAPLIQGLEAVPHLRGYLGARVFPRAGMKP 728 A KQ KP VSRNPEL+RGIGK+SR++M HKRGLWAIKAKNGGVFP+H FYPADDVKKPL+NKRKPKPTKLRASITPGTVLIILAGR KGKRVVFLKQL SGLLLV+GPFK+NGVPLRRVNQ+YVI TSTKVDISGVNV+KFDDKYF + E+K KG+ DDQK+ D L++ +E VP L+ YLGAR +AGMKP Sbjct: 3 AAKQRKPHVSRNPELVRGIGKYSRSKMYHKRGLWAIKAKNGGVFPKHAPKSADSKAVEKPPKFYPADDVKKPLINKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGPFKVNGVPLRRVNQAYVIATSTKVDISGVNVEKFDDKYFGKKAEKKNKKGEGEFFEAEKKEVNVLPQEKKDDQKAVDVALLKAIEGVPELKAYLGARFSLKAGMKP 229
BLAST of EY702599 vs. ExPASy Swiss-Prot
Match: RL63_ARATH (60S ribosomal protein L6-3 OS=Arabidopsis thaliana GN=RPL6C PE=1 SV=1) HSP 1 Score: 292.352 bits (747), Expect = 2.365e-78 Identity = 150/228 (65.79%), Postives = 169/228 (74.12%), Query Frame = 3 Query: 45 MAPKQGKPRVSRNPELIRGIGKFSRARMDHKRGLWAIKAKNGGVFPRHDXXXXXXXXXXXXXXFYPADDVKKPLVNKRKPKPTKLRASITPGTVLIILAGRVKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIGTSTKVDISGVNVDKFDDKYFATEVERKKNKGQNXXXXXXXXXXXXXXXXXXDDQKSCDAPLIQGLEAVPHLRGYLGARVFPRAGMKP 728 M KQ P+V+RNP+LIRG+GK+SR++M HKRGLWAIKAKNGGVFPRHD FYPA+DVKKPL N+R KPTKLRASITPGTVLIILAGR KGKRVVFLKQL SGLLLV+GPFKINGVPLRRVNQ+YVIGTSTKVDISGV +DKFDDKYF E+KK K + DDQK+ DA LI+ +EAVP L+ YLGAR + GMKP Sbjct: 1 MPAKQRTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFYPAEDVKKPLPNRRTAKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFKINGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKKEIPQVKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKP 228
BLAST of EY702599 vs. ExPASy Swiss-Prot
Match: RL61_ARATH (60S ribosomal protein L6-1 OS=Arabidopsis thaliana GN=RPL6A PE=2 SV=1) HSP 1 Score: 291.967 bits (746), Expect = 3.088e-78 Identity = 147/221 (66.52%), Postives = 168/221 (76.02%), Query Frame = 3 Query: 66 PRVSRNPELIRGIGKFSRARMDHKRGLWAIKAKNGGVFPRHDXXXXXXXXXXXXXXFYPADDVKKPLVNKRKPKPTKLRASITPGTVLIILAGRVKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIGTSTKVDISGVNVDKFDDKYFATEVERKKNKGQNXXXXXXXXXXXXXXXXXXDDQKSCDAPLIQGLEAVPHLRGYLGARVFPRAGMKP 728 P+V+RNP+LIRG+GK+SR++M HKRGLWAIKAKNGGVFPRHD FYPA+DVKKPLVN+RKPKPTKL+ASITPGTVLIILAGR KGKRVVFLKQL SGLLLV+GPFKINGVPLRRVNQ+YVIGTSTK+DISGVN +KFDDKYF E+KK K + +DQK+ DA LI+ +EAVP L+ YLGAR GMKP Sbjct: 8 PKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAQPKVDAPVEKPAKFYPAEDVKKPLVNRRKPKPTKLKASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGPFKINGVPLRRVNQAYVIGTSTKIDISGVNTEKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKKEIPQEKKEDQKTVDAALIKSIEAVPELKVYLGARFSLSQGMKP 228
BLAST of EY702599 vs. ExPASy Swiss-Prot
Match: RL62_ARATH (60S ribosomal protein L6-2 OS=Arabidopsis thaliana GN=RPL6B PE=2 SV=1) HSP 1 Score: 287.345 bits (734), Expect = 7.607e-77 Identity = 148/228 (64.91%), Postives = 167/228 (73.25%), Query Frame = 3 Query: 45 MAPKQGKPRVSRNPELIRGIGKFSRARMDHKRGLWAIKAKNGGVFPRHDXXXXXXXXXXXXXXFYPADDVKKPLVNKRKPKPTKLRASITPGTVLIILAGRVKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIGTSTKVDISGVNVDKFDDKYFATEVERKKNKGQNXXXXXXXXXXXXXXXXXXDDQKSCDAPLIQGLEAVPHLRGYLGARVFPRAGMKP 728 M KQ +V+RNP+LIRG+GK+SR++M HKRGLWAIKAKNGGVFPRHD FYPA+DVKKPL N+R KP KLRASITPGTVLIILAGR KGKRVVFLKQL SGLLLV+GPFKINGVPLRRVNQ+YVIGTSTKVDISGV +DKFDDKYF E+KK K + DDQK+ DA LI+ +EAVP L+ YLGAR + GMKP Sbjct: 1 MPAKQRTAKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFYPAEDVKKPLPNRRTAKPAKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFKINGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKKEIPQGKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKP 228
BLAST of EY702599 vs. ExPASy Swiss-Prot
Match: RL6_CHILA (60S ribosomal protein L6 OS=Chinchilla lanigera GN=RPL6 PE=2 SV=3) HSP 1 Score: 151.369 bits (381), Expect = 6.514e-36 Identity = 101/256 (39.45%), Postives = 135/256 (52.73%), Query Frame = 3 Query: 21 AQQKRVASMAPKQGKPRVSRNPELIRGIGKFSRARMDHKRGLWAIKA--------------------------KNGGVFPRHDXXXXXXXXXXXXXXFYPADDVKKPLVNKRKPKP-----TKLRASITPGTVLIILAGRVKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIGTSTKVDISGVNVDK-FDDKYFATEVERKKNKGQNXXXXXXXXXXXXXXXXXXDDQKSCDAPLIQGLEAVPHLRGYL 692 A++ V + K+G+P SRNP L+RGIG++SR+ M ++ L+ K KNGG +YP +DV + L++ K KP KLRASITPGTVLIIL GR +GKRVVFLKQL SGLLLV+GP +N VPLRR +Q +VI TSTK+DIS V + K D YF + + +K + Q DQK+ D+ ++ ++AVP LRGYL Sbjct: 27 AKKANVKAKKSKKGQPHCSRNPVLVRGIGRYSRSAMYSRKALYKRKYTAAKSKVEKKKKEKVLATVTKPVGGDKNGGT---------RVVKLRKMPRYYPTEDVPRKLLSHGK-KPFSQHVRKLRASITPGTVLIILTGRHRGKRVVFLKQLASGLLLVTGPLNLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFKKK-KLRKPRHQEGEIFDTEKERYQISEQRKVDQKAVDSQILPKIKAVPQLRGYL 271
BLAST of EY702599 vs. ExPASy Swiss-Prot
Match: RL6_PIG (60S ribosomal protein L6 OS=Sus scrofa GN=RPL6 PE=2 SV=3) HSP 1 Score: 150.214 bits (378), Expect = 1.451e-35 Identity = 97/245 (39.59%), Postives = 132/245 (53.88%), Query Frame = 3 Query: 54 KQGKPRVSRNPELIRGIGKFSRARMDHKRGLWAIKA--------------------------KNGGVFPRHDXXXXXXXXXXXXXXFYPADDVKKPLVNKRKPKP-----TKLRASITPGTVLIILAGRVKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIGTSTKVDISGVNV-DKFDDKYFATEVERKKNKGQNXXXXXXXXXXXXXXXXXXDDQKSCDAPLIQGLEAVPHLRGYL 692 K+GKP SRNP L+RGIG++SR+ M ++ L+ K KNGG +YP +DV + L++ K KP KLRASITPGT+LIIL GR +GKRV+FLKQL SGLLLV+GP +N VPLRR +Q +VI TSTK+DISGV + + D YF + + +K + Q DQK+ D+ +++ ++AVP L+GYL Sbjct: 34 KKGKPHCSRNPVLVRGIGRYSRSAMYSRKALYKRKYSAAKSKVEKKKKVRVLATVTKPVGGDKNGGT---------RVVKLRKMPRYYPTEDVPRKLLSHGK-KPFSKHVRKLRASITPGTILIILTGRHRGKRVIFLKQLSSGLLLVTGPLSLNRVPLRRTHQKFVIATSTKIDISGVKIPEHLTDAYFKKK-KLRKPRHQEGEIFDTEKEKYEISEQRKVDQKAVDSQILRRIKAVPQLQGYL 267
BLAST of EY702599 vs. ExPASy Swiss-Prot
Match: RL6_BOVIN (60S ribosomal protein L6 OS=Bos taurus GN=RPL6 PE=2 SV=3) HSP 1 Score: 150.214 bits (378), Expect = 1.451e-35 Identity = 98/245 (40.00%), Postives = 132/245 (53.88%), Query Frame = 3 Query: 54 KQGKPRVSRNPELIRGIGKFSRARMDHKRGLWAIKA--------------------------KNGGVFPRHDXXXXXXXXXXXXXXFYPADDVKKPLVNKRKPKP-----TKLRASITPGTVLIILAGRVKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIGTSTKVDISGVNV-DKFDDKYFATEVERKKNKGQNXXXXXXXXXXXXXXXXXXDDQKSCDAPLIQGLEAVPHLRGYL 692 K+GKP SRNP L+RGIG++SR+ M ++ L+ K KNGG +YP +DV + L++ K KP KLRASITPGT+LIIL GR +GKRVVFLKQL SGLLLV+GP +N VPLRR +Q +VI TSTK+DISGV + + D YF + + +K + Q DQK+ D+ +++ ++AVP L+GYL Sbjct: 37 KKGKPHCSRNPVLVRGIGRYSRSAMYSRKALYKRKYSAAKSKVEKKKKVRVLATVTKPVGGDKNGGT---------RVVKLRKMPRYYPTEDVPRKLLSHGK-KPFSKHVRKLRASITPGTILIILTGRHRGKRVVFLKQLGSGLLLVTGPLSLNRVPLRRTHQKFVIATSTKIDISGVKIPEHLTDTYFKKK-KLRKPRHQEGEIFDTEREKYEITEQRKVDQKAVDSQILRRIKAVPQLQGYL 270
BLAST of EY702599 vs. ExPASy Swiss-Prot
Match: RL6_MOUSE (60S ribosomal protein L6 OS=Mus musculus GN=Rpl6 PE=1 SV=3) HSP 1 Score: 149.443 bits (376), Expect = 2.475e-35 Identity = 102/259 (39.38%), Postives = 134/259 (51.74%), Query Frame = 3 Query: 51 PKQGKPRVSRNPELIRGIGKFSRARMDHKRGLWAIKA---------------------------KNGGVFPRHDXXXXXXXXXXXXXXFYPADDVKKPLVNKRKPKP-----TKLRASITPGTVLIILAGRVKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIGTSTKVDISGVNVDK-FDDKYFATEVERKKNKGQNXXXXXXXXXXXXXXXXXXDDQKSCDAPLIQGLEAVPHLRGYLGARVFPRAGMKP 728 PK+ KP SRNP L+RGIG++SR+ M ++ L+ K KNGG +YP +DV + L++ K KP +LR+SITPGTVLIIL GR +GKRVVFLKQL SGLLLV+GP IN VPLRR +Q +VI TSTKVDIS V + K D YF + + +K + Q DQK+ D ++ ++AVP L+GYL ++ GM P Sbjct: 44 PKKAKPHCSRNPVLVRGIGRYSRSAMYSRKALYKRKYSAAKTKVEKKKKKEKVLATVTKTVGGDKNGGT---------RVVKLRKMPRYYPTEDVPRKLLSHGK-KPFSQHVRRLRSSITPGTVLIILTGRHRGKRVVFLKQLDSGLLLVTGPLVINRVPLRRTHQKFVIATSTKVDISDVKIPKHLTDAYFKKK-QLRKPRHQEGEIFDTEKEKYEITEQRKADQKAVDLQILPKIKAVPQLQGYLRSQFSLTNGMYP 291
BLAST of EY702599 vs. ExPASy Swiss-Prot
Match: RL6_HUMAN (60S ribosomal protein L6 OS=Homo sapiens GN=RPL6 PE=1 SV=3) HSP 1 Score: 149.443 bits (376), Expect = 2.475e-35 Identity = 97/246 (39.43%), Postives = 131/246 (53.25%), Query Frame = 3 Query: 51 PKQGKPRVSRNPELIRGIGKFSRARMDHKRGLWAIKA--------------------------KNGGVFPRHDXXXXXXXXXXXXXXFYPADDVKKPLVNKRKPKP-----TKLRASITPGTVLIILAGRVKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIGTSTKVDISGVNVDK-FDDKYFATEVERKKNKGQNXXXXXXXXXXXXXXXXXXDDQKSCDAPLIQGLEAVPHLRGYL 692 PK+GKP SRNP L+RGIG++SR+ M ++ ++ K KNGG +YP +DV + L++ K KP KLRASITPGT+LIIL GR +GKRVVFLKQL SGLLLV+GP +N VPLRR +Q +VI TSTK+DIS V + K D YF + + +K + Q DQK+ D+ ++ ++A+P L+GYL Sbjct: 37 PKKGKPHCSRNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGT---------RVVKLRKMPRYYPTEDVPRKLLSHGK-KPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFKKK-KLRKPRHQEGEIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQLQGYL 271
BLAST of EY702599 vs. ExPASy Swiss-Prot
Match: RL6_RAT (60S ribosomal protein L6 OS=Rattus norvegicus GN=Rpl6 PE=1 SV=5) HSP 1 Score: 145.591 bits (366), Expect = 3.575e-34 Identity = 104/268 (38.81%), Postives = 138/268 (51.49%), Query Frame = 3 Query: 30 KRVASMAPK--QGKPRVSRNPELIRGIGKFSRARMDHKRGLWAIKA---------------------------KNGGVFPRHDXXXXXXXXXXXXXXFYPADDVKKPLVNKRKPKP-----TKLRASITPGTVLIILAGRVKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIGTSTKVDISGVNVDK-FDDKYFATEVERKKNKGQNXXXXXXXXXXXXXXXXXXDDQKSCDAPLIQGLEAVPHLRGYLGARVFPRAGMKP 728 K+ +S A K + KP SRNP L+RGIG++SR+ M ++ L+ K KNGG +YP +DV + L++ K KP +LR+SITPGTVLIIL GR +GKRVVFLKQL SGLLLV+GP +N VPLRR +Q +VI TSTKVDIS V + K D YF + RK + Q DQK+ D+ ++ ++AVP L+GYL ++ GM P Sbjct: 37 KKSSSKAKKLRKSKPHCSRNPVLVRGIGRYSRSAMYSRKALYKRKYSAAKTKVEKKKKKEKVLATVTKTVGGDKNGGT---------RVVKLRKMPRYYPTEDVPRKLLSHGK-KPFSQHVRRLRSSITPGTVLIILTGRHRGKRVVFLKQLGSGLLLVTGPLALNRVPLRRTHQKFVIATSTKVDISKVKIPKHLTDAYFKKKPLRKP-RHQEGEIFDTEKEKYEITEQRKADQKAVDSQILPKIKAVPQLQGYLRSQFSLTNGMYP 293 The following BLAST results are available for this feature:
BLAST of EY702599 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY702599 ID=EY702599; Name=EY702599; organism=Citrus sinensis; type=EST; length=884bpback to top |