EY702591
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBS_MEDSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Medicago sativa PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 5.716e-46 Identity = 73/115 (63.48%), Postives = 87/115 (75.65%), Query Frame = 3 Query: 180 TKKTNNDITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYP 524 TKKTNNDITSIASNGGR+ CM+VWPP G KK ET SYLPPL +E L KE+ YL+R GWIPC EF+LEKG+V RE+ SP YYDGRYWT + L+G TD++ L + + EYP Sbjct: 38 TKKTNNDITSIASNGGRVNCMQVWPPVGKKKFETLSYLPPLTEEQLAKEVEYLIRKGWIPCLEFELEKGFVYRENHRSPGYYDGRYWTMWRLPLFGATDSSQVLKELADCKAEYP 152 HSP 2 Score: 48.1358 bits (113), Expect = 5.716e-46 Identity = 23/33 (69.70%), Postives = 28/33 (84.85%), Query Frame = 1 Query: 70 SMISSTTVATANRASLAQASMVAPFTGLKSSSG 168 ++ISS V T NRAS AQA++VAPFTGLKSS+G Sbjct: 2 ALISSAAVTTVNRASSAQANLVAPFTGLKSSAG 34
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBS_LACSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 4.757e-45 Identity = 76/115 (66.09%), Postives = 89/115 (77.39%), Query Frame = 3 Query: 180 TKKTNNDITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYP 524 TKK NND +S+ SNGGR+QCMKVWPP GLKK ET SYLPPL+DEAL KEI YL+R+ WIPC EF+LE G+V REH HSP YYDGRYWT K ++G TD+A + V E +EYP Sbjct: 38 TKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYP 152 HSP 2 Score: 40.0466 bits (92), Expect = 4.757e-45 Identity = 18/29 (62.07%), Postives = 23/29 (79.31%), Query Frame = 1 Query: 76 ISSTTVATANRASLAQASMVAPFTGLKSS 162 ISS+ +AT NR + QAS+ APFTGLKS+ Sbjct: 4 ISSSAIATVNRTTSTQASLAAPFTGLKSN 32
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBS1_SOYBN (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Glycine max GN=RBCS-1 PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 2.331e-44 Identity = 75/118 (63.56%), Postives = 86/118 (72.88%), Query Frame = 3 Query: 171 GAGTKKTNNDITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYP 524 G T+KTNNDITSIASNGGR+QCM+VWPP G KK ET SYLP L D L KE+ YLLR GWIPC EF+LE G+V REH SP YYDGRYWT K ++G TDA+ L ++E YP Sbjct: 33 GFPTRKTNNDITSIASNGGRVQCMQVWPPIGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYREHNRSPXYYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYP 150 HSP 2 Score: 43.1282 bits (100), Expect = 2.331e-44 Identity = 24/36 (66.67%), Postives = 26/36 (72.22%), Query Frame = 1 Query: 61 LASSMISSTTVATANRASLAQASMVAPFTGLKSSSG 168 +ASSMISS V T NRA A MVAPFTGLKS +G Sbjct: 1 MASSMISSPAVTTVNRAG---AGMVAPFTGLKSMAG 33
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBS_FAGCR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Fagus crenata GN=RBCS1 PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 3.036e-44 Identity = 69/115 (60.00%), Postives = 86/115 (74.78%), Query Frame = 3 Query: 180 TKKTNNDITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYP 524 T+K+NNDITS+ASNGGR+QCMKVWPP GL+K ET SYLPPL+ E+L K+I YL+ GWIPC EF+LE +V RE+ SP YYDGRYW K ++G TDA L ++E + YP Sbjct: 40 TRKSNNDITSLASNGGRVQCMKVWPPLGLQKFETLSYLPPLSIESLAKQIEYLILKGWIPCLEFELEHPFVYRENNRSPGYYDGRYWVMWKLPMFGCTDATQVLAELQEASKTYP 154 HSP 2 Score: 51.9878 bits (123), Expect = 3.036e-44 Identity = 26/35 (74.29%), Postives = 32/35 (91.43%), Query Frame = 1 Query: 61 LASSMISSTTVATANRASLAQASMVAPFTGLKSSS 165 +ASSMISS TVAT +RA+ AQA+MVAPFTGLKS++ Sbjct: 1 MASSMISSATVATVSRATPAQATMVAPFTGLKSTA 35
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBS_BETVE (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 8.756e-44 Identity = 72/115 (62.61%), Postives = 85/115 (73.91%), Query Frame = 3 Query: 180 TKKTNNDITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYP 524 T+KTNNDITSIASNGGR+QCM+VWPP GLKK ET SYLPPL+ E L KE+ YLLR IPC EF+LE G+V REH SP YYDGRYWT K ++G D++ L + E + YP Sbjct: 40 TQKTNNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEFELEHGFVYREHNRSPGYYDGRYWTMWKLPMFGCNDSSQVLKELEECKKAYP 154 HSP 2 Score: 46.9802 bits (110), Expect = 8.756e-44 Identity = 25/35 (71.43%), Postives = 29/35 (82.86%), Query Frame = 1 Query: 61 LASSMISSTTVATANRASLAQASMVAPFTGLKSSS 165 +A SMISS TVA +RAS AQ+SMVAPFT LKS+S Sbjct: 1 MACSMISSATVAAVSRASPAQSSMVAPFTCLKSTS 35
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBS_MANES (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Manihot esculenta PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.487e-43 Identity = 71/115 (61.74%), Postives = 83/115 (72.17%), Query Frame = 3 Query: 180 TKKTNNDITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYP 524 T+KTN+DITSI SNGG++QCMKVWP G+KK ET SYLPPL E L E+ YLLRSGWIPC EF+LE G V REH P YYDGRYWT K ++G TDAA L + E + +P Sbjct: 40 TRKTNSDITSITSNGGKVQCMKVWPTLGMKKFETLSYLPPLTREQLASEVEYLLRSGWIPCLEFELEHGLVYREHARVPGYYDGRYWTMWKLPMFGCTDAAQVLKELDELIKHHP 154 HSP 2 Score: 49.2914 bits (116), Expect = 1.487e-43 Identity = 24/34 (70.59%), Postives = 30/34 (88.24%), Query Frame = 1 Query: 61 LASSMISSTTVATANRASLAQASMVAPFTGLKSS 162 +ASSM+S+ TVA+ NR S AQA+MVAPFTGLKS+ Sbjct: 1 MASSMLSTATVASINRVSPAQATMVAPFTGLKST 34
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBS_GOSHI (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Gossypium hirsutum GN=RBCS PE=3 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 2.525e-43 Identity = 68/115 (59.13%), Postives = 83/115 (72.17%), Query Frame = 3 Query: 180 TKKTNNDITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYP 524 T+K NNDITS+ASNGGR+QCM+VWPP G KK ET SYLP L L KE+ YLLRS WIPC EF+LE+G+V R++ P YYDGRYWT K ++G TD+A L + +EYP Sbjct: 40 TRKANNDITSLASNGGRVQCMQVWPPLGKKKFETLSYLPDLTPVQLAKEVDYLLRSKWIPCLEFELEEGFVHRKYSSLPTYYDGRYWTMWKLPMFGCTDSAQVLEELENCKKEYP 154 HSP 2 Score: 51.6026 bits (122), Expect = 2.525e-43 Identity = 26/35 (74.29%), Postives = 31/35 (88.57%), Query Frame = 1 Query: 61 LASSMISSTTVATANRASLAQASMVAPFTGLKSSS 165 +ASSMISS T+AT N +S AQA+MVAPFTGLKS+S Sbjct: 1 MASSMISSATIATVNCSSPAQANMVAPFTGLKSAS 35
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBS4_SOYBN (Ribulose bisphosphate carboxylase small chain 4, chloroplastic OS=Glycine max GN=RBCS-4 PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 2.527e-43 Identity = 74/118 (62.71%), Postives = 85/118 (72.03%), Query Frame = 3 Query: 171 GAGTKKTNNDITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYP 524 G T+KTNNDITSIASNGGR+QCM+VWPP G KK ET SYLP L D L KE+ YLLR GWIPC EF+LE G+V REH S YYDGRYWT K ++G TDA+ L ++E YP Sbjct: 33 GLPTRKTNNDITSIASNGGRVQCMQVWPPVGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYREHNRSLGYYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYP 150 HSP 2 Score: 43.1282 bits (100), Expect = 2.527e-43 Identity = 24/36 (66.67%), Postives = 26/36 (72.22%), Query Frame = 1 Query: 61 LASSMISSTTVATANRASLAQASMVAPFTGLKSSSG 168 +ASSMISS V T NRA A MVAPFTGLKS +G Sbjct: 1 MASSMISSPAVTTVNRAG---AGMVAPFTGLKSMAG 33
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBS_MALSP (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Malus sp. GN=RBCS PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 3.291e-43 Identity = 68/113 (60.18%), Postives = 85/113 (75.22%), Query Frame = 3 Query: 186 KTNNDITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYP 524 + +NDITSIASNGGR+QCM+VWPP GLKK ET SYLPPL+ E+L KE+ YLLR W+PC EF+LE G+V RE+ SP YYDGRYWT K ++G TD++ L + E + YP Sbjct: 43 RKSNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSTESLAKEVDYLLRKNWVPCLEFELEHGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYP 155 HSP 2 Score: 47.3654 bits (111), Expect = 3.291e-43 Identity = 28/37 (75.68%), Postives = 31/37 (83.78%), Query Frame = 1 Query: 61 LASSMISSTTVAT--ANRASLAQASMVAPFTGLKSSS 165 +ASSMISS TVAT A+R + AQA MVAPFTGLKSSS Sbjct: 1 MASSMISSGTVATVSADRPAPAQARMVAPFTGLKSSS 37
BLAST of EY702591 vs. ExPASy Swiss-Prot
Match: RBS_HEVBR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Hevea brasiliensis GN=RBCS PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 5.588e-43 Identity = 70/115 (60.87%), Postives = 81/115 (70.43%), Query Frame = 3 Query: 180 TKKTNNDITSIASNGGRLQCMKVWPPTGLKKLETPSYLPPLADEALLKEITYLLRSGWIPCSEFQLEKGWVDREHPHSPRYYDGRYWTTAKPALYGRTDAAAGLNGVREGPREYP 524 T+KT DITSIASNGGR+QCM+VWPP G K ET SYLPPL E L KE+ YLLR GW+PC EF+LE G V RE+ SP YYDGRYWT K ++G TDA L + E + YP Sbjct: 40 TRKTTTDITSIASNGGRVQCMQVWPPRGKKFYETLSYLPPLTREQLAKEVEYLLRKGWVPCLEFELEHGTVYREYHRSPGYYDGRYWTMWKLPMFGCTDAVQVLQELDEMIKAYP 154 HSP 2 Score: 50.8322 bits (120), Expect = 5.588e-43 Identity = 26/35 (74.29%), Postives = 30/35 (85.71%), Query Frame = 1 Query: 61 LASSMISSTTVATANRASLAQASMVAPFTGLKSSS 165 +ASSM+S+ VA NRAS AQASMVAPFTGLKS+S Sbjct: 1 MASSMLSTAAVACINRASPAQASMVAPFTGLKSTS 35 The following BLAST results are available for this feature:
BLAST of EY702591 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 104
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Sequences
The
following sequences are available for this feature:
EST sequence >EY702591 ID=EY702591; Name=EY702591; organism=Citrus sinensis; type=EST; length=963bpback to top |