DY305557
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305557 vs. ExPASy Swiss-Prot
Match: NEK4_ARATH (Serine/threonine-protein kinase Nek4 OS=Arabidopsis thaliana GN=NEK4 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 9.250e-27 Identity = 69/158 (43.67%), Postives = 94/158 (59.49%), Query Frame = 2 Query: 218 RGLVKSMLRKNPEFRPSAAELLCHPHLQPYVLGIHLKLNGPRRNTFPLEWS--DSNFKKTRFMEPEAISIHSNREKRQSFSNDRALNPSVSETEQDSLSSTLRGRAFGNYMNQKFKELSIGVVHEELGVD-MSTTPNVCNAGKTPRLTPAKVSATPRK 682 RGL+KSMLRKNPE RPSA ELL HPHLQPY+ +++KL PRR+TFPL++S D+ K+ R R SFSNDR LNPSVS+TE S+SS+ + + +K E+++GVV EE+ A +TPR+ A+ ++ Sbjct: 232 RGLIKSMLRKNPELRPSANELLNHPHLQPYISMVYMKLESPRRSTFPLQFSERDATLKERR---------------RSSFSNDRRLNPSVSDTEAGSVSSSGKASPTPMFNGRKVSEVTVGVVREEIVPQRQEEAKKQSGAARTPRVAGTSAKASTQR 374
BLAST of DY305557 vs. ExPASy Swiss-Prot
Match: NEK2_ORYSJ (Serine/threonine-protein kinase Nek2 OS=Oryza sativa subsp. japonica GN=NEK2 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.479e-25 Identity = 68/178 (38.20%), Postives = 93/178 (52.25%), Query Frame = 2 Query: 218 RGLVKSMLRKNPEFRPSAAELLCHPHLQPYVLGIHLKLNGPRRNTFPLEWS-DSNFKKTRFMEPEAISIHSNREKRQSFSNDRALNPSVSETEQDSLSSTLRGRAFGNY-MNQKFKELSIGVVHEELGVDMSTTPNVCNAG---KTPRLTPAKVSATPRKQATPSKNTHIGSKRDSLP 736 RGL+KSMLRK+PE RPSAA+LL HP LQPYVL + LK + P RN P+ S KK F S +R S N+R + S E++S+SST R+ Y Q K LS+ E G ++++ + +TP+ PAK + T R Q P K ++ + R LP Sbjct: 232 RGLIKSMLRKSPEHRPSAAQLLKHPQLQPYVLQVQLK-SSPTRNILPIHQSLTDKVKKMTFPSDVVDSARRRMARRNSLGNERTVTFSKPSPERNSVSST---RSIKEYTTTQSVKGLSVD--SSEAGDEVTSKAIITKTSSILRTPKSLPAK-TYTARNQLEPPKTSYNRTYRSELP 402 HSP 2 Score: 43.8986 bits (102), Expect = 1.479e-25 Identity = 22/33 (66.67%), Postives = 24/33 (72.73%), Query Frame = 3 Query: 852 PKCFVNASKIDKIANFPLASSEDPLLSIPKNLS 950 P VNA +ID+IA FPLASSEDPLL I LS Sbjct: 441 PDVSVNAPRIDRIAEFPLASSEDPLLPIHNKLS 473
BLAST of DY305557 vs. ExPASy Swiss-Prot
Match: NEK2_ORYSI (Serine/threonine-protein kinase Nek2 OS=Oryza sativa subsp. indica GN=NEK2 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.479e-25 Identity = 66/177 (37.29%), Postives = 92/177 (51.98%), Query Frame = 2 Query: 218 RGLVKSMLRKNPEFRPSAAELLCHPHLQPYVLGIHLKLNGPRRNTFPLEWS-DSNFKKTRFMEPEAISIHSNREKRQSFSNDRALNPSVSETEQDSLSSTLRGRAFGNYMNQKFKELSIGVVHEELGVDMSTTPNVCNAG---KTPRLTPAKVSATPRKQATPSKNTHIGSKRDSLP 736 RGL+KSMLRK+PE RPSAA+LL HP LQPYVL + LK + P RN P+ S KK F S +R S N+R + S E++S+SST R+ Y + E + V E G ++++ + +TP+ PAK + T R Q P K ++ + R LP Sbjct: 232 RGLIKSMLRKSPEHRPSAAQLLKHPQLQPYVLQVQLK-SSPTRNILPIHQSLTDKVKKMTFPSDVVDSARRRMARRNSLGNERTVTFSKPSPERNSVSST---RSIKEYTTTQSVE-GLSVDSSEAGDEVTSKAIITKTSSILRTPKSLPAK-TYTARNQLEPPKTSYNRTYRSELP 402 HSP 2 Score: 43.8986 bits (102), Expect = 1.479e-25 Identity = 22/33 (66.67%), Postives = 24/33 (72.73%), Query Frame = 3 Query: 852 PKCFVNASKIDKIANFPLASSEDPLLSIPKNLS 950 P VNA +ID+IA FPLASSEDPLL I LS Sbjct: 441 PDVSVNAPRIDRIAEFPLASSEDPLLPIHNKLS 473
BLAST of DY305557 vs. ExPASy Swiss-Prot
Match: NEK1_ARATH (Serine/threonine-protein kinase Nek1 OS=Arabidopsis thaliana GN=NEK1 PE=2 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 2.204e-23 Identity = 71/188 (37.77%), Postives = 95/188 (50.53%), Query Frame = 2 Query: 218 RGLVKSMLRKNPEFRPSAAELLCHPHLQPYVLGIHLKLNGPRRNTFPLEWSDSN--FKKTRFMEPEAISIHSNREKRQSFSNDRALNPSVSETEQDSLSSTLRGRAFGNYMNQKFKELSIGVVHEELGVDMSTTPNVCNAGKTPRLTPAKVSATPRK-QATPSKNTHIGSKRDSLPFHKIQGGSPSPR 772 RGLVKSMLRKNPE RPSA++LL HPHLQPYVL + L+LN RR T P E S KK F EP + +S NDRALNP E E+D+ SS ++++ +LSI + + + + C K P AK S T R+ T ++ H+ H + GG + + Sbjct: 232 RGLVKSMLRKNPEVRPSASDLLRHPHLQPYVLDVKLRLNNLRRKTLPPELPSSKRIMKKAHFSEPAVTCPAFGERQHRSLWNDRALNP---EAEEDTASSI-------KCISRRISDLSIESSSKGTLICKQVSSSACKVSKYPL---AKSSVTSRRIMETGRRSDHL---------HPVSGGGTTSK 397 HSP 2 Score: 27.7202 bits (60), Expect = 2.204e-23 Identity = 13/35 (37.14%), Postives = 18/35 (51.43%), Query Frame = 3 Query: 852 PKCFVNASKIDKIANFPLASSEDPLLSIPKNLSNS 956 P+ +N ++DKIA FPLA E + P S Sbjct: 434 PEYSINEPQVDKIAIFPLAPYEQDIFFTPMQRKTS 468
BLAST of DY305557 vs. ExPASy Swiss-Prot
Match: NEK1_ORYSJ (Serine/threonine-protein kinase Nek1 OS=Oryza sativa subsp. japonica GN=NEK1 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.868e-19 Identity = 75/200 (37.50%), Postives = 100/200 (50.00%), Query Frame = 2 Query: 137 DLQAFISYITWXXXXXXXXXXXXCVYSRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVLGIHLKLNGPRRNTFPLEWSDSNFKKTRFMEPEAISIHSNREKRQSFSNDRALNPSVSETEQDSLSSTLRGRAFGNYMNQKFKELSIGV-VHEELGVDMSTTPNVCNAGKTPRLTPAKVSATPRKQATPSKNTHIGSKRDSL 733 D+QA IS IT RGL+KSMLRK+PE RPSAAELL HPHLQPYVL +HLK + P RN P S K + M S+ ++ +R S N+R + S E+ SS + + + K+LSI V + EE+ + T + KTP+ TP+K TP Q P K ++ R L Sbjct: 207 DMQALISKITKSIVSPLPTRYSGAF--RGLIKSMLRKSPEHRPSAAELLKHPHLQPYVLQVHLK-SSPARNIIPSH--QSPIDKVKKMTFPTESMCRSKGRRNSLGNERIVTFSKPSPERKFTSSIQSIKDYST--TRSVKDLSIDVSLVEEVSSKTTFTTRTSSIVKTPKRTPSKTITTP--QLEPPKVSYNRVNRSEL 397
BLAST of DY305557 vs. ExPASy Swiss-Prot
Match: NEK3_ORYSJ (Serine/threonine-protein kinase Nek3 OS=Oryza sativa subsp. japonica GN=NEK3 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.284e-17 Identity = 65/164 (39.63%), Postives = 87/164 (53.05%), Query Frame = 2 Query: 218 RGLVKSMLRKNPEFRPSAAELLCHPHLQPYVLGIHLKLNGPRRNTFPLEWSDSNFKKTRFMEPEAISIHSNREKRQSFSNDRALNPSVSETEQDSLSSTLRGRAFGNYMNQKFKELSIGVVHEELGVDMSTTPNVCNAGKTPRLTPAKVSATPRKQATPSKNTH 709 RGL+KSMLRK+P+ RPSAAELL HPHLQP+VL + LK + P RN FP D+N K + E + + K SF DR + SST + + + Q EL +G + E++ VD N K+P TP + S+TPR + PSK H Sbjct: 232 RGLIKSMLRKSPDHRPSAAELLKHPHLQPFVLELQLK-SSPARNLFP----DTN--KASCSDDEN-NWKAKYSKSHSFKVDRIVKVDKVAANNGHPSSTGTAKDYQELLKQPMDEL-LGQLTEKV-VDEVIHGNHSRVTKSPAPTPRRASSTPRIRLEPSKTFH 385
BLAST of DY305557 vs. ExPASy Swiss-Prot
Match: NEK2_ARATH (Serine/threonine-protein kinase Nek2 OS=Arabidopsis thaliana GN=NEK2 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.137e-15 Identity = 58/161 (36.02%), Postives = 82/161 (50.93%), Query Frame = 2 Query: 218 RGLVKSMLRKNPEFRPSAAELLCHPHLQPYVLGIHLKLNGPRRNTFPLEWSDS-NFKKTRFMEPEAISIHSNREKRQSFSNDRALNPS-VSETEQDSLSSTLRGRAFGNYMNQKFKELSIGVVHEELGVDMSTTPNVCNAGKTPRLTPAKVSATPRKQATP 694 RGLVKSMLRKNPE RPSAAELL P LQPY+ IHLK+N P N P +W +S + ++ F E ++R+ + PS +DS+SS + Y+N +E + + + G D + A K+ R P + SA+P + P Sbjct: 232 RGLVKSMLRKNPELRPSAAELLRQPLLQPYIQKIHLKVNDPGSNVLPAQWPESESARRNSFPE----------QRRRPAGKSHSFGPSRFRGNLEDSVSSI--KKTVPAYLN---RERQVDLSTDASG-DGTVVRRTSEASKSSRYVPVRASASPVRPRQP 376 The following BLAST results are available for this feature:
BLAST of DY305557 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY305557 ID=DY305557; Name=DY305557; organism=Citrus sinensis; type=EST; length=1272bpback to top |