EY702327
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY702327 vs. ExPASy Swiss-Prot
Match: TGFA1_HUMAN (Transforming growth factor-beta receptor-associated protein 1 OS=Homo sapiens GN=TGFBRAP1 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.765e-20 Identity = 76/283 (26.86%), Postives = 125/283 (44.17%), Query Frame = 3 Query: 21 NQLSPDKVIAAIDSKKVEILQRYLQWLIEDQDSDDTQFHTLYALSLAKSAIEAFEEESGSKAFGTQMGETRSSGYGKNSIFQCPVQERLQIFLQSSDLYDPEDVLDLIEGSELWLEKAILYRKLGQETLVLQILALKLEDSEAAEQYC--AEIGRPDAYMQ-----LLDMYLDSQDGKEPMFKAAVRLLHNHGESLDPLQVLETLSPDMPLQLASDTIXXXXXXXXXXXXQGQIVHNLSRAVDIDARLARLEERSRHVQINDESLCDSCHARLGNKLFAMYPD 848 N +PD +I + K + L +YL+ L+ D+ ++HT A+ + + SG A T+ Q +L+ LQ SDLY +L+ ++G+ L +E AIL+ KLG+ L IL +L+D AAE YC GR + Q LL +YL + + AAV LL+ H D QVL+ L +QL + Q+ L+R+ ++ +++ + +Q++D+ LC C +F YP+ Sbjct: 572 NSFNPDDIINCL-KKYPKALVKYLEHLVIDKRLQKEEYHTHLAVLYLEEVLLQRASASGKGAEATE------------------TQAKLRRLLQKSDLYRVHFLLERLQGAGLPMESAILHGKLGEHEKALHILVHELQDFAAAEDYCLWCSEGRDPPHRQQLFHTLLAIYLHAGPTAHELAVAAVDLLNRHATEFDAAQVLQMLPDTWSVQLLCPFLMGAMRDSIHARRTMQVALGLARSENLIYTYDKMKLKGSSIQLSDKKLCQICQNPFCEPVFVRYPN 835
BLAST of EY702327 vs. ExPASy Swiss-Prot
Match: TGFA1_DANRE (Transforming growth factor-beta receptor-associated protein 1 homolog OS=Danio rerio GN=tgfbrap1 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.358e-19 Identity = 86/307 (28.01%), Postives = 134/307 (43.65%), Query Frame = 3 Query: 3 TRPKRINQLSPDKVIAAIDSKKVEILQRYLQWLIEDQDSDDTQFHTLYALSLAKSAIEAFEEESGSKAFGTQMGETRSSGYGKNSIFQCPVQERLQIFLQSSDLYDPEDVLDLIEGSELWL-EKAILYRKLGQETLVLQILALKLEDSEAAEQYCAEIG-------RPDAYMQLLDMYLDSQDGKEPMFKAAVRLLHNHGESLDPLQVLETLSPDMPLQLASDTIXXXXXXXXXXXXQGQIVHNLSRAVDIDARLARLEERSRHVQINDESLCDSCHARLGNKLFAMYPDDTNVCYKWYRKQGDPLP 899 T +R QL+ D VI + K + L YL+ L+ ++ ++HT A+ A+ + S S+ Q+ R ++LQ L+ S+LY + +L I+ SEL L E+A L+ KL + L +L +L+DS AAE+YC+ R + + QLL +YLD AAV LL+ H E D ++VL+ L D L L + Q+ L+RA ++ RL+ R V ++++ C CH A P T V K+ LP Sbjct: 566 TSEERRGQLNADDVITYLQ-KHSQALLLYLEHLVLEKKLQKEKYHTHLAVLYAEKVLGLISRPSTSEE---QLSAAR---------------QKLQRLLKESNLYRVQLLLGKIQDSELLLLERATLHGKLEEHDKALHVLVHQLKDSSAAEEYCSWASASQDSSYRQNLFHQLLSVYLDPDVPGGAQTVAAVDLLNRHAEVFDAVRVLKLLPEDWSLPLLRPFLCGAMRATVHARCTSQVALGLARAQNLQLLHDRLKYRGGPVLVSEKKGCQLCHNTFSEPDCACLPGGTPVHINCVAKKALDLP 853
BLAST of EY702327 vs. ExPASy Swiss-Prot
Match: TGFA1_MOUSE (Transforming growth factor-beta receptor-associated protein 1 OS=Mus musculus GN=Tgfbrap1 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.176e-18 Identity = 69/280 (24.64%), Postives = 122/280 (43.57%), Query Frame = 3 Query: 30 SPDKVIAAIDSKKVEILQRYLQWLIEDQDSDDTQFHTLYALSLAKSAIEAFEEESGSKAFGTQMGETRSSGYGKNSIFQCPVQERLQIFLQSSDLYDPEDVLDLIEGSELWLEKAILYRKLGQETLVLQILALKLEDSEAAEQYC-------AEIGRPDAYMQLLDMYLDSQDGKEPMFKAAVRLLHNHGESLDPLQVLETLSPDMPLQLASDTIXXXXXXXXXXXXQGQIVHNLSRAVDIDARLARLEERSRHVQINDESLCDSCHARLGNKLFAMYPD 848 +PD +I+++ K + L +YL+ L+ D+ ++HT A+ + + G T+ Q +L+ LQ SDLY + + ++G+ L +E AIL+ KLG+ L IL ++ D AAE YC R + LL MYL + + + AAV LL++H D QVL+ L +QL + Q+ L+++ ++ +++ + V++++ LC C G +F YP+ Sbjct: 575 NPDNIISSL-KKYPKALVKYLEHLVIDRRLQKEEYHTHLAILYLEEVLRQRVSTGGKDVEATE------------------TQAKLRRLLQKSDLYRVHLLKEKVQGAGLPMESAILHGKLGEHEKALHILVHEMGDFSAAEDYCLWSSEGQGAACRQRLFHTLLAMYLRAGPSAQDLTVAAVDLLNHHAREFDVTQVLQLLPDTWSVQLLCPFLMGAMRDSIHARRTTQVALGLAKSENLIYMYDKMKLKGNAVRLSERELCQLCQNPFGEPVFVRYPN 835
BLAST of EY702327 vs. ExPASy Swiss-Prot
Match: TGFA1_BOVIN (Transforming growth factor-beta receptor-associated protein 1 OS=Bos taurus GN=TGFBRAP1 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 3.143e-17 Identity = 76/280 (27.14%), Postives = 121/280 (43.21%), Query Frame = 3 Query: 30 SPDKVIAAIDSKKVEILQRYLQWLIEDQDSDDTQFHTLYALSLAKSAIEAFEEESGSKAFGTQMGETRSSGYGKNSIFQCPVQERLQIFLQSSDLYDPEDVLDLIEGSELWLEKAILYRKLGQETLVLQILALKLEDSEAAEQYC--AEIGRPDAYMQ-----LLDMYLDSQDGKEPMFKAAVRLLHNHGESLDPLQVLETLSPDMPLQLASDTIXXXXXXXXXXXXQGQIVHNLSRAVDIDARLARLEERSRHVQINDESLCDSCHARLGNKLFAMYPD 848 +PD +I+ + K + L +YL+ L+ ++ ++HT A+ E ++ + ++ ET Q +L+ LQ SDLY ++D G+ L LE AIL+ KL Q L IL +L D AAE YC GR Y Q LL +YL AAV LL+ H D QVL+ L +QL + Q+ L+R+ ++ + +++ + V+++DE LC C +F YP+ Sbjct: 574 NPDDIISCL-KKYPQALVKYLEHLVTERRLQKEEYHTHLAVLYLD---EVLQQRPCTPDKDAEVTET---------------QAKLRRLLQESDLYRVHFLMDRTRGAGLPLESAILHGKLEQHEEALHILVHELADFPAAEDYCLWRSEGRDPPYRQRLFHLLLAVYLGPGPAAPARTVAAVDLLNRHAVEFDAAQVLQLLPGTWSVQLLRPFLMGAMRDSIHARRTTQVAVGLARSENLIYKYDKMKLKGSSVRLSDEKLCQMCQNPFLEPVFVRYPN 834
BLAST of EY702327 vs. ExPASy Swiss-Prot
Match: VPS39_MOUSE (Vam6/Vps39-like protein OS=Mus musculus GN=Vps39 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.741e-11 Identity = 75/318 (23.58%), Postives = 126/318 (39.62%), Query Frame = 3 Query: 18 INQLSPDKVIAAIDSKKVEILQRYLQWLIEDQDSDDTQFHTL---------------YALSL--AKSAIEAFEEESGSKAFGTQMGETRSSGYGKNSIFQCPVQERLQIFLQSSDLYDPEDVLDLIEGSELWLEKAILYRKLGQETLVLQILALKLEDSEAAEQYC------AEIGRPDAYMQLLDMYLD----------SQDGKEPM--FKAAVRLLHNHGESLDPLQVLETLSPDMPLQLASDTIXXXXXXXXXXXXQGQIVHNLSRAVDIDARLARLEERSRHVQINDESLCDSCHARLGNKLFAMYPDDTNVCY 866 + L D+V+ + + YL+ +I + +QFH Y LSL KS + A EE G ++GE R ++L +FL+ S YDP ++ L E+A+L ++G+ L I L+D++ A++YC + G D Y+ LL MYL + EP +AA+++L H LD + + L + + + Q++ NL A + + R+ + I +E +C C ++GN FA YP+ V Y Sbjct: 580 VESLPRDRVLNFLIENFKALAIPYLEHIIHVWEETGSQFHNCLIQLYCEKVQSLMKDYLLSLPTGKSPVPAGEE-------GGELGEYR---------------QKLLMFLEISSHYDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIYVHVLKDTKMAKEYCHKHYDQNKEGNKDVYLSLLRMYLSPPSIHCLGPIKLELLEPQANLQAALQVLELHYSKLDTTKAINLLPANTQINDIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQVKCIITEEKVCMVCKKKIGNSAFARYPNGVVVHY 875 The following BLAST results are available for this feature:
BLAST of EY702327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY702327 ID=EY702327; Name=EY702327; organism=Citrus sinensis; type=EST; length=904bpback to top |