CX077878
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX077878 vs. ExPASy Swiss-Prot
Match: PUB10_ARATH (U-box domain-containing protein 10 OS=Arabidopsis thaliana GN=PUB10 PE=2 SV=1) HSP 1 Score: 374.015 bits (959), Expect = 5.229e-103 Identity = 207/267 (77.53%), Postives = 229/267 (85.77%), Query Frame = 2 Query: 2 IEQPIGLANGKIKKSDGSFRDVSGDVVAIEALVRKLSSRSVEERRAAVAEIRSLSKRSTDNRIIIAEAGAIPVLVNLLTTD-DVMTQEHAVTAILNLSIYENNKGLIMLAGAIPSIVQILRAGSMEARENAAATLFSLSLLDENKIIIGASGAIPALVDLLQNGSTRGRKDAATALFNLCIYMGNKGRAVRAGIISALLKMLTDSRN-CMVDEALTILSVLASNPEAKIAIVKASTIPVLIDLLRTGLPRNKENAAAILLSLCKRDT 796 IEQP G NG+ K SDGSFRD+SGD+ AI ALV KLSS+S+E+RR AV+EIRSLSKRSTDNRI+IAEAGAIPVLV LLT+D D TQE+AVT ILNLSIYE+NK LIMLAGA+ SIV +LRAGSMEARENAAATLFSLSL DENKIIIGASGAI ALVDLLQ GS RG+KDAATALFNLCIY GNKGRAVRAGI+ L+KMLTDS + M DEALTILSVLASN AK AI++A+ IP LID L+ PRN+ENAAAILL LCKRDT Sbjct: 315 IEQPGGYMNGRTKNSDGSFRDLSGDMSAIRALVCKLSSQSIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQENAVTCILNLSIYEHNKELIMLAGAVTSIVLVLRAGSMEARENAAATLFSLSLADENKIIIGASGAIMALVDLLQYGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDSSSERMADEALTILSVLASNQVAKTAILRANAIPPLIDCLQKDQPRNRENAAAILLCLCKRDT 581
BLAST of CX077878 vs. ExPASy Swiss-Prot
Match: PUB11_ARATH (U-box domain-containing protein 11 OS=Arabidopsis thaliana GN=PUB11 PE=2 SV=2) HSP 1 Score: 370.163 bits (949), Expect = 7.551e-102 Identity = 200/266 (75.19%), Postives = 230/266 (86.47%), Query Frame = 2 Query: 2 IEQPIGLANGKIKKSDGSFRDVSGDVVAIEALVRKLSSRSVEERRAAVAEIRSLSKRSTDNRIIIAEAGAIPVLVNLLTTDDVMTQEHAVTAILNLSIYENNKGLIMLAGAIPSIVQILRAGSMEARENAAATLFSLSLLDENKIIIGASGAIPALVDLLQNGSTRGRKDAATALFNLCIYMGNKGRAVRAGIISALLKMLTDS-RNCMVDEALTILSVLASNPEAKIAIVKASTIPVLIDLLRTGLPRNKENAAAILLSLCKRDT 796 IEQP G NG+ K S GD+ I ALV++LSSRS E+RR AV+EIRSLSKRSTDNRI+IAEAGAIPVLVNLLT++DV TQE+A+T +LNLSIYENNK LIM AGA+ SIVQ+LRAG+MEARENAAATLFSLSL DENKIIIG SGAIPALVDLL+NG+ RG+KDAATALFNLCIY GNKGRAVRAGI++AL+KML+DS R+ MVDEALTILSVLA+N +AK AIVKA+T+P LI +L+T RN+ENAAAILLSLCKRDT Sbjct: 313 IEQPAGYINGRTKNS--------GDMSVIRALVQRLSSRSTEDRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTSEDVATQENAITCVLNLSIYENNKELIMFAGAVTSIVQVLRAGTMEARENAAATLFSLSLADENKIIIGGSGAIPALVDLLENGTPRGKKDAATALFNLCIYHGNKGRAVRAGIVTALVKMLSDSTRHRMVDEALTILSVLANNQDAKSAIVKANTLPALIGILQTDQTRNRENAAAILLSLCKRDT 570
BLAST of CX077878 vs. ExPASy Swiss-Prot
Match: PUB13_ARATH (U-box domain-containing protein 13 OS=Arabidopsis thaliana GN=PUB13 PE=2 SV=1) HSP 1 Score: 289.271 bits (739), Expect = 1.694e-77 Identity = 147/236 (62.29%), Postives = 188/236 (79.66%), Query Frame = 2 Query: 86 IEALVRKLSSRSVEERRAAVAEIRSLSKRSTDNRIIIAEAGAIPVLVNLLTTDDVMTQEHAVTAILNLSIYENNKGLIMLAGAIPSIVQILRAGSMEARENAAATLFSLSLLDENKIIIGASGAIPALVDLLQNGSTRGRKDAATALFNLCIYMGNKGRAVRAGIISALLKMLTDSRNCMVDEALTILSVLASNPEAKIAIVKASTIPVLIDLLRTGLPRNKENAAAILLSLCKRD 793 IE L+ +L+ + E++R+A EIR L+KR+ DNR+ IAEAGAIP+LV LL+T D QEH+VTA+LNLSI ENNKG I+ AGAIP IVQ+L+ GSMEARENAAATLFSLS++DENK+ IGA GAIP LV LL G+ RG+KDAATALFNLCIY GNKG+A+RAG+I L ++LT+ + MVDEAL IL++L+S+PE K I + +P L++ +RTG PRN+ENAAA+L+ LC D Sbjct: 354 IEDLMWRLAYGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLNLSICENNKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPPLVVLLNEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDEALAILAILSSHPEGKAIIGSSDAVPSLVEFIRTGSPRNRENAAAVLVHLCSGD 589
BLAST of CX077878 vs. ExPASy Swiss-Prot
Match: PUB14_ARATH (U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14 PE=1 SV=1) HSP 1 Score: 285.804 bits (730), Expect = 1.873e-76 Identity = 150/261 (57.47%), Postives = 198/261 (75.86%), Query Frame = 2 Query: 2 IEQPIGLANGKIKKSDGSFRDVSGDVVAIEALVRKLSSRSVEERRAAVAEIRSLSKRSTDNRIIIAEAGAIPVLVNLLTTDDVMTQEHAVTAILNLSIYENNKGLIMLAGAIPSIVQILRAGSMEARENAAATLFSLSLLDENKIIIGASGAIPALVDLLQNGSTRGRKDAATALFNLCIYMGNKGRAVRAGIISALLKMLTDSRNCMVDEALTILSVLASNPEAKIAIVKASTIPVLIDLLRTGLPRNKENAAAILLSLC 784 IE P + + K GS D + +L+ KL++ + E++RAA E+R L+KR+ DNR+ IAEAGAIP+LV LL++ D TQEH+VTA+LNLSI E NKG I+ AGAI IV++L+ GSMEARENAAATLFSLS++DENK+ IGA+GAI AL+ LL+ G+ RG+KDAATA+FNLCIY GNK RAV+ GI+ L ++L D+ MVDEAL IL++L++N E K AI +A +IPVL++++RTG PRN+ENAAAIL LC Sbjct: 320 IELPQNQGSCRTTKIGGSSSS-DCDRTFVLSLLEKLANGTTEQQRAAAGELRLLAKRNVDNRVCIAEAGAIPLLVELLSSPDPRTQEHSVTALLNLSINEGNKGAIVDAGAITDIVEVLKNGSMEARENAAATLFSLSVIDENKVAIGAAGAIQALISLLEEGTRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGMVDEALAILAILSTNQEGKTAIAEAESIPVLVEIIRTGSPRNRENAAAILWYLC 579 HSP 2 Score: 88.9669 bits (219), Expect = 3.360e-17 Identity = 61/180 (33.89%), Postives = 92/180 (51.11%), Query Frame = 2 Query: 74 DVVAIEALVRKLSSRSVEERRAAVAEIRSLSKRSTDNRIIIAEAGAIPVLVNLLTTDDVMTQEHAVTAILNLSIYENNKGLIMLAGAIPSIVQILRAGSMEARENAAATLFSLSLLDENKIIIGASGAIPALVDLLQNGSTRGRKDAATALFNLCIYMGNKGRAVRAGIISALLKMLTDS 613 D AI +V L + S+E R A A + SLS +N++ I AGAI L++LL ++ A TAI NL IY+ NK + G + + ++L+ + A A L LS E K I + +IP LV++++ GS R R++AA L+ LCI + R LK LT++ Sbjct: 426 DAGAITDIVEVLKNGSMEARENAAATLFSLSVID-ENKVAIGAAGAIQALISLLEEGTRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGMVDEALAILAILSTNQEGKTAIAEAESIPVLVEIIRTGSPRNRENAAAILWYLCIGNIERLNVAREVGADVALKELTEN 604
BLAST of CX077878 vs. ExPASy Swiss-Prot
Match: SL11_ORYSJ (Protein spotted leaf 11 OS=Oryza sativa subsp. japonica GN=SPL11 PE=1 SV=2) HSP 1 Score: 285.419 bits (729), Expect = 2.446e-76 Identity = 142/239 (59.41%), Postives = 192/239 (80.33%), Query Frame = 2 Query: 68 SGDVVAIEALVRKLSSRSVEERRAAVAEIRSLSKRSTDNRIIIAEAGAIPVLVNLLTTDDVMTQEHAVTAILNLSIYENNKGLIMLAGAIPSIVQILRAGSMEARENAAATLFSLSLLDENKIIIGASGAIPALVDLLQNGSTRGRKDAATALFNLCIYMGNKGRAVRAGIISALLKMLTDSRNCMVDEALTILSVLASNPEAKIAIVKASTIPVLIDLLRTGLPRNKENAAAILLSLC 784 S + I+AL+ KL S EE+R+A AE+R L+KR+ +NRI IAEAGAIP+L++LL++ D+ TQEHAVTA+LNLSI+E+NK I+ +GA+PSIV +L+ GSMEARENAAATLFSLS++DE K+ IG GAIPALV LL GS RG+KDAA ALFNLCIY GNKGRA+RAG++ ++ ++T+ ++DEA+ ILS+L+S+PE K AI A +PVL++++ +G PRN+ENAAA++L LC Sbjct: 363 SSERANIDALLSKLCSPDTEEQRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRTQEHAVTALLNLSIHEDNKASIISSGAVPSIVHVLKNGSMEARENAAATLFSLSVIDEYKVTIGGMGAIPALVVLLGEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGALMDEAMAILSILSSHPEGKAAIGAAEPVPVLVEMIGSGTPRNRENAAAVMLHLC 601
BLAST of CX077878 vs. ExPASy Swiss-Prot
Match: SL11_ORYSI (Protein spotted leaf 11 OS=Oryza sativa subsp. indica GN=SPL11 PE=1 SV=2) HSP 1 Score: 285.419 bits (729), Expect = 2.446e-76 Identity = 142/239 (59.41%), Postives = 192/239 (80.33%), Query Frame = 2 Query: 68 SGDVVAIEALVRKLSSRSVEERRAAVAEIRSLSKRSTDNRIIIAEAGAIPVLVNLLTTDDVMTQEHAVTAILNLSIYENNKGLIMLAGAIPSIVQILRAGSMEARENAAATLFSLSLLDENKIIIGASGAIPALVDLLQNGSTRGRKDAATALFNLCIYMGNKGRAVRAGIISALLKMLTDSRNCMVDEALTILSVLASNPEAKIAIVKASTIPVLIDLLRTGLPRNKENAAAILLSLC 784 S + I+AL+ KL S EE+R+A AE+R L+KR+ +NRI IAEAGAIP+L++LL++ D+ TQEHAVTA+LNLSI+E+NK I+ +GA+PSIV +L+ GSMEARENAAATLFSLS++DE K+ IG GAIPALV LL GS RG+KDAA ALFNLCIY GNKGRA+RAG++ ++ ++T+ ++DEA+ ILS+L+S+PE K AI A +PVL++++ +G PRN+ENAAA++L LC Sbjct: 363 SSERANIDALLSKLCSPDTEEQRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRTQEHAVTALLNLSIHEDNKASIISSGAVPSIVHVLKNGSMEARENAAATLFSLSVIDEYKVTIGGMGAIPALVVLLGEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGALMDEAMAILSILSSHPEGKAAIGAAEPVPVLVEMIGSGTPRNRENAAAVMLHLC 601
BLAST of CX077878 vs. ExPASy Swiss-Prot
Match: PUB12_ARATH (U-box domain-containing protein 12 OS=Arabidopsis thaliana GN=PUB12 PE=2 SV=1) HSP 1 Score: 279.641 bits (714), Expect = 1.342e-74 Identity = 142/235 (60.43%), Postives = 191/235 (81.28%), Query Frame = 2 Query: 86 IEALVRKLSSRSVEERRAAVAEIRSLSKRSTDNRIIIAEAGAIPVLVNLLT-TDDVMTQEHAVTAILNLSIYENNKGLIMLA-GAIPSIVQILRAGSMEARENAAATLFSLSLLDENKIIIGASGAIPALVDLLQNGSTRGRKDAATALFNLCIYMGNKGRAVRAGIISALLKMLTDSRNCMVDEALTILSVLASNPEAKIAIVKASTIPVLIDLLRTGLPRNKENAAAILLSLC 784 IE L+ KL+S+ E+RR+A EIR L+K++ NR+ IA +GAIP+LVNLLT ++D TQEHAVT+ILNLSI + NKG I+ + GA+P IV +L+ GSMEARENAAATLFSLS++DENK+ IGA+GAIP LV LL GS RG+KDAATALFNLCI+ GNKG+AVRAG++ L+++LT+ + MVDE+L+IL++L+S+P+ K + A +PVL+D +R+G PRNKEN+AA+L+ LC Sbjct: 357 IEELLLKLTSQQPEDRRSAAGEIRLLAKQNNHNRVAIAASGAIPLLVNLLTISNDSRTQEHAVTSILNLSICQENKGKIVYSSGAVPGIVHVLQKGSMEARENAAATLFSLSVIDENKVTIGAAGAIPPLVTLLSEGSQRGKKDAATALFNLCIFQGNKGKAVRAGLVPVLMRLLTEPESGMVDESLSILAILSSHPDGKSEVGAADAVPVLVDFIRSGSPRNKENSAAVLVHLC 591
BLAST of CX077878 vs. ExPASy Swiss-Prot
Match: PUB15_ARATH (U-box domain-containing protein 15 OS=Arabidopsis thaliana GN=PUB15 PE=2 SV=2) HSP 1 Score: 237.654 bits (605), Expect = 5.849e-62 Identity = 127/232 (54.74%), Postives = 169/232 (72.84%), Query Frame = 2 Query: 86 IEALVRKLSSRSVEERRAAVAEIRSLSKRSTDNRIIIAEAGAIPVLVNLLTTDDVMTQEHAVTAILNLSIYENNKGLIMLAGAIPSIVQILRAGSMEARENAAATLFSLSLLDENKIIIGASGAIPALVDLLQNGSTRGRKDAATALFNLCIYMGNKGRAVRAGIISALLKMLTDSRNCMVDEALTILSVLASNPEAKIAIVKASTIPVLIDLLRTGLPRNKENAAAILLSL 781 + LV LSS +EE+R +V ++R L++ + +NR++IA AGAIP+LV LL+ D QE+AVT +LNLSI E NK LI GAIP+I++IL G+ EAREN+AA LFSLS+LDENK+ IG S IP LVDLLQ+G+ RG+KDA TALFNL + NKGRA+ AGI+ LL +L D M+DEAL+IL +LAS+PE + AI + S I L++ +R G P+NKE A ++LL L Sbjct: 381 VSLLVEALSSSQLEEQRRSVKQMRLLARENPENRVLIANAGAIPLLVQLLSYPDSGIQENAVTTLLNLSIDEVNKKLISNEGAIPNIIEILENGNREARENSAAALFSLSMLDENKVTIGLSNGIPPLVDLLQHGTLRGKKDALTALFNLSLNSANKGRAIDAGIVQPLLNLLKDKNLGMIDEALSILLLLASHPEGRQAIGQLSFIETLVEFIRQGTPKNKECATSVLLEL 612
BLAST of CX077878 vs. ExPASy Swiss-Prot
Match: PUB4_ARATH (U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4 PE=1 SV=2) HSP 1 Score: 221.09 bits (562), Expect = 5.665e-57 Identity = 125/246 (50.81%), Postives = 173/246 (70.33%), Query Frame = 2 Query: 44 SDGSFRDVSGDVVAIEALVRKLSSRSVEERRAAVAEIRSLSKRSTDNRIIIAEAGAIPVLVNLLTTDDVMTQEHAVTAILNLSIYENNKGLIMLAGAIPSIVQILRAGSMEARENAAATLFSLSLLDENKIIIGASGAIPALVDLLQNGSTRGRKDAATALFNLCIYMGNKGRAVRAGIISALLKMLTDSRNCMVDEALTILSVLASNPEAKIAIVKASTIPVLIDLLRTGLPRNKENAAAILLSL 781 S+ + RD+S ++ LV +L S S++ +R A AE+R L+K + DNRI+I +GAI +LV LL + D TQE+AVTA+LNLSI +NNK I AGAI ++ +L GS EA+EN+AATLFSLS+++ENKI IG SGAI LVDLL NG+ RG+KDAATALFNL I+ NK V++G + L+ ++ D MVD+A+ +L+ LA+ PE + AI + IP+L++++ G R KENAAA LL L Sbjct: 529 SNETRRDLSEVETQVKKLVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYSTDSATQENAVTALLNLSINDNNKKAIADAGAIEPLIHVLENGSSEAKENSAATLFSLSVIEENKIKIGQSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLIDLM-DPAAGMVDKAVAVLANLATIPEGRNAIGQEGGIPLLVEVVELGSARGKENAAAALLQL 773
BLAST of CX077878 vs. ExPASy Swiss-Prot
Match: PUB2_ARATH (U-box domain-containing protein 2 OS=Arabidopsis thaliana GN=PUB2 PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.306e-50 Identity = 114/234 (48.72%), Postives = 160/234 (68.38%), Query Frame = 2 Query: 86 IEALVRKLSSRSVEERRAAVAEIRSLSKRSTDNRIIIAEAGAIPVLVNLLTTDDVMTQEHAVTAILNLSIYENNKGLIMLAGAIPSIVQILRAGSM-EARENAAATLFSLSLLDENKIIIGASGAIPALVDLLQNGSTRGRKDAATALFNLCIYMGNKGRAVRAGIISALLKMLTDSRNCMVDEALTILSVLASNPEAKIAIVKASTIPVLIDLLRTGLPRNKENAAAILLSLC 784 ++ L+ L S S++ +R A A IR L++ STDNRI+IA AIP LV+LL + D Q AVT +LNLSI +NNK LI +GAI ++ +L+ G + EA+ N+AATLFSLS+++E K IG +GAI LVDLL +GS G+KDAATALFNL I+ NK + + AG + L++++ D MV++A+ +L+ LA+ E KIAI + IPVL++++ G R KENA A LL LC Sbjct: 423 VKKLIDDLKSSSLDTQREATARIRILARNSTDNRIVIARCEAIPSLVSLLYSTDERIQADAVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSAATLFSLSVIEEYKTEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIEAGAVRYLVELM-DPAFGMVEKAVVVLANLATVREGKIAIGEEGGIPVLVEVVELGSARGKENATAALLQLC 655 The following BLAST results are available for this feature:
BLAST of CX077878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >CX077878 ID=CX077878; Name=CX077878; organism=Citrus sinensis; type=EST; length=798bpback to top |