DR405245
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR405245 vs. ExPASy Swiss-Prot
Match: ADF_VITVI (Actin-depolymerizing factor OS=Vitis vinifera PE=2 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 1.190e-62 Identity = 118/146 (80.82%), Postives = 128/146 (87.67%), Query Frame = 3 Query: 87 MSFRGLSRPNATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAN 524 MSFRGL NA+SGMGVADHSKN F EL+RKKVHRYVIFKID TGGPAES+++FAAALPENDCRYAVYDFD+VTSENCQKSKIFFIAWSP +SRIRAKMLYATSK+RFRRELDG+HYEIQATDPTEMDLE LR RA+ Sbjct: 1 MSFRGL---NASSGMGVADHSKNTFLELKRKKVHRYVIFKIDEKKKEVVVEKTGGPAESFDEFAAALPENDCRYAVYDFDFVTSENCQKSKIFFIAWSPDSSRIRAKMLYATSKERFRRELDGVHYEIQATDPTEMDLEVLRERAH 143
BLAST of DR405245 vs. ExPASy Swiss-Prot
Match: ADF6_ARATH (Actin-depolymerizing factor 6 OS=Arabidopsis thaliana GN=ADF6 PE=1 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 1.232e-59 Identity = 111/146 (76.03%), Postives = 120/146 (82.19%), Query Frame = 3 Query: 87 MSFRGLSRPNATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAN 524 MSFRGLSRPNA SGMGVAD SK F ELQRKK HRYV+FKID TG P ESY+DF A+LP+NDCRYAVYDFD+VTSENCQKSKIFF AWSPSTS IRAK+LY+TSKD+ REL GIHYEIQATDPTE+DLE LR RAN Sbjct: 1 MSFRGLSRPNAISGMGVADESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESYDDFLASLPDNDCRYAVYDFDFVTSENCQKSKIFFFAWSPSTSGIRAKVLYSTSKDQLSRELQGIHYEIQATDPTEVDLEVLRERAN 146
BLAST of DR405245 vs. ExPASy Swiss-Prot
Match: ADF11_ORYSJ (Actin-depolymerizing factor 11 OS=Oryza sativa subsp. japonica GN=ADF11 PE=2 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.458e-52 Identity = 98/140 (70.00%), Postives = 113/140 (80.71%), Query Frame = 3 Query: 105 SRPNATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAN 524 SR NA+SG+GVA K F ELQRKK HRYVIFKID TG ES++DF +LPE+DCRYA+YDFD+VT ENCQKSKIFF+AWSPS SRIRAKMLYATSK+RFRRELDG+HYEIQATDP+E+D+E LR RA+ Sbjct: 6 SRANASSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLPESDCRYAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDGVHYEIQATDPSELDIELLRERAH 145
BLAST of DR405245 vs. ExPASy Swiss-Prot
Match: ADF2_ORYSJ (Actin-depolymerizing factor 2 OS=Oryza sativa subsp. japonica GN=ADF2 PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 3.971e-50 Identity = 97/140 (69.29%), Postives = 110/140 (78.57%), Query Frame = 3 Query: 105 SRPNATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAN 524 S NA+SGMGVA ++ F ELQ KK RYVIFKI+ TG ESY+DF A+LPENDCRYA+YDFD+VT EN QKSKIFFIAWSPSTSRIRAKMLY+TSKDR ++ELDG HYEIQATDPTE+DLE LR RA+ Sbjct: 6 SHSNASSGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYDDFLASLPENDCRYALYDFDFVTGENVQKSKIFFIAWSPSTSRIRAKMLYSTSKDRIKQELDGFHYEIQATDPTEVDLEVLRERAH 145
BLAST of DR405245 vs. ExPASy Swiss-Prot
Match: ADF1_PETHY (Actin-depolymerizing factor 1 OS=Petunia hybrida GN=ADF1 PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 7.750e-46 Identity = 84/137 (61.31%), Postives = 107/137 (78.10%), Query Frame = 3 Query: 114 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAN 524 NA SGM V D K F EL+ K+ HR++++KI+ G P ESYEDFAA+LPEN+CRYAVYDFD+VT+ENCQKS+IFFIAW P T+R+R+KM+YA+SKDRF+RELDGI E+QA DPTEM L+ +++RAN Sbjct: 3 NAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKIGEPTESYEDFAASLPENECRYAVYDFDFVTAENCQKSRIFFIAWCPDTARVRSKMIYASSKDRFKRELDGIQVELQACDPTEMGLDVIQSRAN 139
BLAST of DR405245 vs. ExPASy Swiss-Prot
Match: ADF10_ORYSJ (Actin-depolymerizing factor 10 OS=Oryza sativa subsp. japonica GN=ADF10 PE=2 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.012e-45 Identity = 85/130 (65.38%), Postives = 104/130 (80.00%), Query Frame = 3 Query: 135 VADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAN 524 V + SK+AF EL+R+KVHRYVIFKID TG P ESY+DF A+LP +DCRYAVYD D+V+ +NC+KSKIFFI+WSPS SRIRAK +YA S+++FR ELDG+H+EIQATDP +MDLE LR RAN Sbjct: 20 VPEKSKSAFWELKRRKVHRYVIFKIDDRREEIVVEKTGAPGESYDDFTASLPADDCRYAVYDLDFVSDDNCRKSKIFFISWSPSVSRIRAKTIYAVSRNQFRHELDGVHFEIQATDPDDMDLEVLRGRAN 149
BLAST of DR405245 vs. ExPASy Swiss-Prot
Match: ADF7_ORYSJ (Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica GN=ADF7 PE=3 SV=2) HSP 1 Score: 179.104 bits (453), Expect = 1.909e-44 Identity = 82/137 (59.85%), Postives = 105/137 (76.64%), Query Frame = 3 Query: 114 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAN 524 NA SGM V D K F EL+ K+ +R++I+KID G P +Y+DFAA+LP N+CRYA++D+D+VT ENCQKSKIFFIAWSP TSR+R+KM+YA+SKDRF+RELDGI E+QATDPTE+ L+ +R RAN Sbjct: 3 NAASGMAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASLPANECRYAIFDYDFVTEENCQKSKIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVELQATDPTEVGLDVIRGRAN 139
BLAST of DR405245 vs. ExPASy Swiss-Prot
Match: ADF1_ARATH (Actin-depolymerizing factor 1 OS=Arabidopsis thaliana GN=ADF1 PE=1 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 3.256e-44 Identity = 80/137 (58.39%), Postives = 105/137 (76.64%), Query Frame = 3 Query: 114 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAN 524 NA SGM V D K F EL+ K+ HR++++KI+ G P ++YE+FAA LP ++CRYA+YDFD+VT+ENCQKSKIFFIAW P +++R+KM+YA+SKDRF+RELDGI E+QATDPTEMDL+ R+RAN Sbjct: 3 NAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLPADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVFRSRAN 139
BLAST of DR405245 vs. ExPASy Swiss-Prot
Match: ADF4_ARATH (Actin-depolymerizing factor 4 OS=Arabidopsis thaliana GN=ADF4 PE=2 SV=2) HSP 1 Score: 177.563 bits (449), Expect = 5.554e-44 Identity = 80/137 (58.39%), Postives = 105/137 (76.64%), Query Frame = 3 Query: 114 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAN 524 NA SGM V D K F EL+ K+ HR++++KI+ G P +YEDFAA+LP ++CRYA+YDFD+VT+ENCQKSKIFFIAW P +++R+KM+YA+SKDRF+RELDGI E+QATDPTEMDL+ L++R N Sbjct: 3 NAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLPADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVLKSRVN 139
BLAST of DR405245 vs. ExPASy Swiss-Prot
Match: ADF10_ARATH (Actin-depolymerizing factor 10 OS=Arabidopsis thaliana GN=ADF10 PE=2 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.237e-43 Identity = 80/137 (58.39%), Postives = 104/137 (75.91%), Query Frame = 3 Query: 114 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAN 524 N+ SGM V+D K F EL+ K+ +R+++FKID G P E+YEDF ++PE++CRYAVYD+D+ T ENCQKSKIFFIAWSP TSR+R+KMLYA+SKDRF+RELDGI E+QATDP+EM L+ ++ R N Sbjct: 3 NSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSIPEDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVELQATDPSEMSLDIIKGRVN 139 The following BLAST results are available for this feature:
BLAST of DR405245 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >DR405245 ID=DR405245; Name=DR405245; organism=Citrus sinensis; type=EST; length=687bpback to top |